10 20 30 40 50 60 70 80 2J3C - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PSEUDOMONAS SP.LDC-5 19-AUG-06 2J3C
TITLE THEORTICAL MODEL OF MNNG MUTANT OF (MNNG-S) PSEUDOMONAS SP. TITLE 2 LDC-5 PHAC1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHAC2 POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALPHA BETA HYDROLASE FOLD BINDING DOMAIN; COMPND 5 EC: 5.3.1.1
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SP. LDC-5; SOURCE 3 ORGANISM_COMMON: PSEUDOMONAS; SOURCE 4 STRAIN: LDC-5; SOURCE 5 VARIANT: FIELD ISOLATE; SOURCE 6 OTHER_DETAILS: MADURAI COLLECTION OF PHA ACCMULATING SOURCE 7 PSEUDOMONAS STRAINS.
KEYWDS PSEUDOMONAS SP.LDC-5, PHAC1 GENE, PHA SYNTHASE, PHA KEYWDS 2 ACCUMULATING PSEUDOMONAS STRAINS, HOMOLOGY MODELING MNNG KEYWDS 3 MUTAGENESIS, ENHANCED PRODUCTION OF PHA.
EXPDTA THEORETICAL MODEL
AUTHOR K.SUJATHA,A.MAHALAKSHMI,R.SHENBAGARATHAI
REVDAT 1 19-OCT-06 2J3C 0
JRNL AUTH K.SUJATHA,A.MAHALAKSHMI,R.SHENBAGARATHAI JRNL TITL THEORTICAL MODEL OF MNNG MUTANT OF (MNNG-S) JRNL TITL 2 PSEUDOMONAS SP. JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2J3C COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998
REMARK 100 REMARK 100 THIS ENTRY HAS DEPOSITED AT EBI ON 19-AUG-2006. REMARK 100 THE EBI ID CODE IS EBI-29773.
REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THIS MODEL WAS BUILT USING THE STRUCTURE OF ALPHA BETA REMARK 220 HYDROLASE FOLD OF GASTRIC LIPASE. THIS THEORETICAL MODEL REMARK 220 ENTRY WAS NOT ANNOTATED AND NOT VALIDATED BY THE WWPDB REMARK 220 STAFF AND THEREFORE MAY NOT CONFORM TO THE PDB FORMAT.
REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 O LEU A 74 CB ALA A 80 1.43 REMARK 500 O ALA A 80 N LEU A 84 1.88 REMARK 500 CD2 LEU A 36 CE1 TYR A 39 2.10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 7 CG HIS A 7 CD2 0.102 REMARK 500 ARG A 25 C ASN A 26 N 0.105 REMARK 500 PRO A 29 CD PRO A 29 N 0.097 REMARK 500 PRO A 29 C ARG A 30 N 0.112 REMARK 500 HIS A 31 CG HIS A 31 CD2 0.103 REMARK 500 HIS A 77 CG HIS A 77 CD2 0.101 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 10 O - C - N ANGL. DEV. =-38.1 DEGREES REMARK 500 TRP A 21 O - C - N ANGL. DEV. =-22.2 DEGREES REMARK 500 ASN A 26 O - C - N ANGL. DEV. =-20.6 DEGREES REMARK 500 PRO A 59 C - N - CD ANGL. DEV. =-47.7 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 10 -137.61 -34.90 REMARK 500 TRP A 21 71.65 144.50
SEQRES 1 A 89 GLN HIS SER SER SER THR CYS SER LYS ALA ALA CYS ARG SEQRES 2 A 89 CYS SER TRP SER ALA ARG ARG ASN PRO ASP PRO ARG HIS SEQRES 3 A 89 ARG GLU TRP GLY LEU SER SER TYR VAL GLN ALA LEU GLU SEQRES 4 A 89 GLU ALA LEU ASN ALA CYS ARG SER ILE SER GLY ASN ARG SEQRES 5 A 89 ASP PRO ASN LEU MET GLY ALA CYS ALA GLY GLY LEU THR SEQRES 6 A 89 MET ALA ALA LEU GLN GLY HIS LEU GLN ALA LYS LYS GLN SEQRES 7 A 89 LEU ARG ARG VAL ARG SER ALA THR TYR LEU VAL
HELIX 1 1 CYS A 12 ARG A 18 5 7 HELIX 2 2 ASP A 28 GLU A 33 1 6 HELIX 3 3 GLY A 35 SER A 37 5 3 HELIX 4 4 SER A 38 GLY A 55 1 18 HELIX 5 5 CYS A 65 HIS A 77 1 13 HELIX 6 6 HIS A 77 ARG A 85 1 9
SHEET 1 AA 2 ASN A 60 ALA A 64 0 SHEET 2 AA 2 SER A 89 LEU A 93 1 O SER A 89 N LEU A 61
CISPEP 1 ARG A 25 ASN A 26 0 -7.19
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000