2J3A - Header Asymmetric Unit

HEADER PSEUDOMONAS SP.LDC-5 19-AUG-06 2J3A

TITLE THEORTICAL MODEL OF UV PIGMENTED MUTANT OF PSEUDOMONAS SP. TITLE 2 LDC-5

COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHAC2 POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALPHA BETA HYDROLASE BINDING DOMAIN; COMPND 5 EC: 5.3.1.1

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SP. LDC-5; SOURCE 3 ORGANISM_COMMON: PSEUDOMONAS; SOURCE 4 STRAIN: LDC-5; SOURCE 5 VARIANT: FIELD ISOLATE; SOURCE 6 OTHER_DETAILS: MADURAI COLLECTION OF PHA ACCUMULATING SOURCE 7 PSEUDOMONAS STRAINS.

KEYWDS PSEUDOMONAS SP.LDC-5, PHAC1 GENE, PHA SYNTHASE, PHA KEYWDS 2 ACCUMULATING PSEUDOMONAS STRAINS, HOMOLOGY MODELING, UV KEYWDS 3 MUTAGENESIS, ENHANCED PRODUCTION OF PHA.

EXPDTA THEORETICAL MODEL

AUTHOR K.SUJATHA,A.MAHALAKSHMI,R.SHENBAGARATHAI

REVDAT 1 19-OCT-06 2J3A 0

JRNL AUTH K.SUJATHA,A.MAHALAKSHMI,R.SHENBAGARATHAI JRNL TITL THEORTICAL MODEL OF UV PIGMENTED MUTANT OF JRNL TITL 2 PSEUDOMONAS SP. LDC-5 JRNL REF TO BE PUBLISHED JRNL REFN

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 2J3A COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998

REMARK 100 REMARK 100 THIS ENTRY HAS DEPOSITED AT EBI ON 19-AUG-2006. REMARK 100 THE EBI ID CODE IS EBI-29771.

REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: THIS MODEL WAS BUILT USING THE ALPHA BETA HYDROLASE REMARK 220 FOLD OF GASTRIC LIPASE. THIS THEORETICAL MODEL ENTRY WAS REMARK 220 NOT ANNOTATED AND NOT VALIDATED BY THE WWPDB STAFF AND REMARK 220 THEREFORE MAY NOT CONFORM TO THE PDB FORMAT.

REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI REMARK 500 CD2 TYR A 36 CG2 THR A 67 0.81 REMARK 500 O LEU A 71 CB ALA A 77 1.43 REMARK 500 CE2 TYR A 36 CG2 THR A 67 1.54 REMARK 500 O ALA A 77 N LEU A 81 1.88 REMARK 500 CG TYR A 36 CG2 THR A 67 1.89 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),F6.3) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 28 CG HIS A 28 CD2 0.102 REMARK 500 HIS A 74 CG HIS A 74 CD2 0.101 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES: ENGH AND HUBER, 1991 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 22 O - C - N ANGL. DEV. =-75.0 DEGREES REMARK 500 PRO A 56 C - N - CD ANGL. DEV. =-47.7 DEGREES

SEQRES 1 A 90 THR ASN SER PHE VAL GLN TYR MET LEU LYS SER GLY LEU SEQRES 2 A 90 GLN VAL PHE MET VAL SER TRP ARG ASN PRO ASP PRO ARG SEQRES 3 A 90 HIS ARG GLU TRP GLY LEU SER SER TYR VAL GLN ALA LEU SEQRES 4 A 90 GLU GLU ALA LEU ASN ALA CYS ARG SER ILE SER GLY ASN SEQRES 5 A 90 ARG ASP PRO ASN LEU MET GLY ALA CYS ALA GLY GLY LEU SEQRES 6 A 90 THR MET ALA ALA LEU GLN GLY HIS LEU GLN ALA LYS LYS SEQRES 7 A 90 GLN LEU ARG ARG VAL ARG SER ALA THR TYR LEU VAL

HELIX 1 1 SER A 4 SER A 12 1 9 HELIX 2 2 GLY A 32 SER A 34 5 3 HELIX 3 3 SER A 35 GLY A 52 1 18 HELIX 4 4 CYS A 62 HIS A 74 1 13 HELIX 5 5 HIS A 74 ARG A 82 1 9

SHEET 1 AA 2 ASN A 57 ALA A 61 0 SHEET 2 AA 2 SER A 86 LEU A 90 1 O SER A 86 N LEU A 58

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000