2IHH - Header Asymmetric Unit

HEADER DUMMY FOR WHATIF 26-SEP-06 2IHH

TITLE 3D MODEL OF MATRIX PROTEIN [MEASLES VIRUS]

COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEASLES VIRUS MATRIX PROTEIN; COMPND 3 CHAIN: NULL; COMPND 4 FRAGMENT: 3D MODEL OF MEASLES VIRUS MATRIX PROTEIN; COMPND 5 EC: not defined; COMPND 6 MUTATION: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STRAIN MEASLES VIRUS EDMONSTON STRAIN; SOURCE 3 STRAIN: STRAIN MEASLES VIRUS EDMONSTON STRAIN; SOURCE 4 OTHER_DETAILS: MEASLES VIRUS (EDMONSTON STRAIN ) MATRIX SOURCE 5 PROTEIN

KEYWDS MEASLES VIRUS (EDMONSTON) MATRIX PROTEIN

EXPDTA THEORETICAL MODEL

AUTHOR P.BHATTACHARYA

REVDAT 1 24-OCT-06 2IHH 0

JRNL AUTH P.BHATTACHARYA JRNL TITL 3D MODEL OF MEASLES VIRUS MATRIX PROTEIN JRNL REF JOURNAL NOT DECIDED YET V. 0 0 2006

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: A 3D MODEL OF YOUR PROTEIN HAS BEEN REMARK 3 BUILT USING THE 3D STRUCTURE 1JDH CHAIN 'A' AS TEMPLATE WITH REMARK 3 ESYPRED3D PROGRAM(WHICH USED MODELLER PROGRAM). THIS TEMPLATE REMARK 3 SHARES 15.2% IDENTITIES WITH MEASLES VIRUS MATRIX PROTEIN REMARK 3 SEQUENCE (USING THE ALIGN PROGRAM. THE TEMPLATE WAS CHOSEN REMARK 3 FROM PSI-BLAST LINKED WITH SEVERAL PROTEIN DATABASES(PDB,SWISS REMARK 3 -PROT, IPI, ETC).THE MODEL WAS VERIFIED WITH WHATIF, VERIFY REMARK 3 3D, GROMOS, ANOLEA, PROCHECK ETC PROGRAMS, AND VIEWED WITH REMARK 3 DEEPVIEW(PDB VIEWER), RASMOL AND VMD 1.84 PROGRAMS.

REMARK 4 REMARK 4 2IHH COMPLIES WITH FORMAT V. 2.3, 09-JULY-1998

REMARK 100 REMARK 100 THIS ENTRY WAS DEPOSITED AT RCSB ON 26-SEP-2006. REMARK 100 THE RCSB ID CODE IS RCSB039576.

REMARK 220 REMARK 220 EXPERIMENTAL DETAILS REMARK 220 EXPERIMENT TYPE : THEORETICAL MODELLING REMARK 220 REMARK 220 REMARK: PROTEIN SEQUENCE ID AAF85679 335 AA REMARK 220 LINEAR VRL 25-JAN-2001 DEFINITION MATRIX PROTEIN REMARK 220 [MEASLES VIRUS]. ACCESSION AAF85679 VERSION AAF85679.1 REMARK 220 GI:9181887 DBSOURCE LOCUS AF266288 ACCESSION AF266288.1 REMARK 220 KEYWORDS . SOURCE MEASLES VIRUS ORGANISM MEASLES VIRUS REMARK 220 VIRUSES; SSRNA NEGATIVE-STRAND VIRUSES; MONONEGAVIRALES; REMARK 220 PARAMYXOVIRIDAE; PARAMYXOVIRINAE; MORBILLIVIRUS. REMARK 220 REFERENCE 1 (RESIDUES 1 TO 335) AUTHORS PARKS,C.L., REMARK 220 LERCH,R.A., WALPITA,P., WANG,H.P., SIDHU,M.S. AND UDEM, REMARK 220 S.A. TITLE COMPARISON OF PREDICTED AMINO ACID SEQUENCES REMARK 220 OF MEASLES VIRUS STRAINS IN THE EDMONSTON VACCINE REMARK 220 LINEAGE JOURNAL J. VIROL. 75 (2), 910-920 (2001) PUBMED REMARK 220 11134304 REFERENCE 2 (RESIDUES 1 TO 335) AUTHORS PARKS, REMARK 220 C.L., LERCH,R.A., WALPITA,P., WANG,H.-P., SIDHU,M.S. AND REMARK 220 UDEM,S.A. THIS THEORETICAL MODEL ENTRY WAS NOT ANNOTATED REMARK 220 AND NOT VALIDATED BY THE WWPDB STAFF AND THEREFORE MAY REMARK 220 NOT CONFORM TO THE PDB FORMAT.

REMARK 225 REMARK 225 THEORETICAL MODEL REMARK 225 THE COORDINATES IN THIS ENTRY REPRESENT A MODEL STRUCTURE. REMARK 225 PROTEIN DATA BANK CONVENTIONS REQUIRE THAT CRYST1 AND REMARK 225 SCALE RECORDS BE INCLUDED, BUT THE VALUES ON THESE REMARK 225 RECORDS ARE MEANINGLESS.

REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU 194 C REMARK 470 LEU 335 O

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 0 RELATED DB: BMCD REMARK 900 0 REMARK 900 RELATED ID: 0 RELATED DB: BMRB REMARK 900 0 REMARK 900 RELATED ID: 0 RELATED DB: EMDB REMARK 900 0 REMARK 900 RELATED ID: 0 RELATED DB: NDB REMARK 900 0 REMARK 900 RELATED ID: 0 RELATED DB: TARGETDB REMARK 900 0 REMARK 900 RELATED ID: 2IG4(RCSB039533) RELATED DB: PDB REMARK 900 SUBMITTED BY ME; NOT RELEASED YET; I WANT TO REPLACE THE REMARK 900 PREVIOUS ENTRY WITH THIS NEW SUBMISSION.

SEQRES 1 335 MET THR GLU ILE TYR ASP PHE ASP LYS SER ALA TRP ASP SEQRES 2 335 ILE LYS GLY SER ILE ALA PRO ILE GLN PRO THR THR TYR SEQRES 3 335 SER ASP GLY ARG LEU VAL PRO GLN VAL ARG VAL ILE ASP SEQRES 4 335 PRO GLY LEU GLY ASP ARG LYS ASP GLU CYS PHE MET TYR SEQRES 5 335 MET PHE LEU LEU GLY VAL VAL GLU GLY SER ASP PRO LEU SEQRES 6 335 GLY PRO PRO ILE GLY ARG ALA PHE GLY SER LEU PRO LEU SEQRES 7 335 GLY VAL GLY ARG SER THR ALA LYS PRO GLU GLU LEU LEU SEQRES 8 335 LYS GLU ALA THR GLU LEU ASP ILE VAL VAL ARG ARG THR SEQRES 9 335 ALA GLY LEU ASN GLU LYS LEU VAL PHE TYR ASN ASN THR SEQRES 10 335 PRO LEU THR LEU LEU THR PRO TRP ARG LYS VAL LEU THR SEQRES 11 335 THR GLY SER VAL PHE ASN ALA ASN GLN VAL CYS ASN ALA SEQRES 12 335 VAL ASN LEU ILE PRO LEU ASP THR PRO GLN ARG PHE ARG SEQRES 13 335 VAL VAL TYR MET SER ILE THR ARG LEU SER ASP ASN GLY SEQRES 14 335 TYR TYR THR VAL PRO ARG ARG MET LEU GLU PHE ARG SER SEQRES 15 335 VAL ASN ALA VAL ALA PHE ASN LEU LEU VAL THR LEU ARG SEQRES 16 335 ILE ASP LYS ALA ILE GLY PRO GLY LYS ILE ILE ASP ASN SEQRES 17 335 THR GLU GLN LEU PRO GLU ALA THR PHE MET VAL HIS ILE SEQRES 18 335 GLY ASN PHE ARG ARG LYS LYS SER GLU VAL TYR SER ALA SEQRES 19 335 ASP TYR CYS LYS MET LYS ILE GLU LYS MET GLY LEU VAL SEQRES 20 335 PHE ALA LEU GLY GLY ILE GLY GLY THR SER LEU HIS ILE SEQRES 21 335 ARG SER THR GLY LYS MET SER LYS THR LEU HIS ALA GLN SEQRES 22 335 LEU GLY PHE LYS LYS THR LEU CYS TYR PRO LEU MET ASP SEQRES 23 335 ILE ASN GLU ASP LEU ASN ARG LEU LEU TRP ARG SER ARG SEQRES 24 335 CYS LYS ILE VAL ARG ILE GLN ALA VAL LEU GLN PRO SER SEQRES 25 335 VAL PRO GLN GLU PHE ARG ILE TYR ASP ASP VAL ILE ILE SEQRES 26 335 ASN ASP ASP GLN GLY LEU PHE LYS VAL LEU

HELIX 1 1 SER 17 SER 27 1 11 HELIX 2 2 ARG 30 LEU 42 1 13 HELIX 3 3 MET 51 SER 62 1 12 HELIX 4 4 GLY 70 SER 75 1 6 HELIX 5 5 LEU 76 ALA 94 1 19 HELIX 6 6 GLU 96 THR 104 1 9 HELIX 7 7 ALA 105 TYR 114 1 10 HELIX 8 8 PRO 118 VAL 134 1 17 HELIX 9 9 CYS 141 THR 151 1 11 HELIX 10 10 PHE 155 ARG 164 1 10 HELIX 11 11 SER 166 TYR 171 1 6 HELIX 12 12 THR 172 MET 177 1 6 HELIX 13 13 LEU 190 LEU 194 5 5 HELIX 14 14 GLY 203 VAL 219 1 17 HELIX 15 15 LYS 227 ALA 234 1 8 HELIX 16 16 LYS 265 GLY 275 1 11 HELIX 17 17 PHE 276 TYR 282 1 7 HELIX 18 18 PHE 317 ASN 326 1 10 HELIX 19 19 ASP 327 LEU 335 1 9

CRYST1 1000.000 1000.000 1000.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 0.001000 0.000000 0.000000 0.00000

SCALE2 0.000000 0.001000 0.000000 0.00000

SCALE3 0.000000 0.000000 0.001000 0.00000