10 20 30 40 50 60 70 80 2I9Y - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 06-SEP-06 2I9Y
TITLE SOLUTION STRUCTURE OF ARABIDOPSIS THALIANA PROTEIN TITLE 2 AT1G70830, A MEMBER OF THE MAJOR LATEX PROTEIN FAMILY
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR LATEX PROTEIN-LIKE PROTEIN 28 OR MLP-LIKE COMPND 3 PROTEIN 28; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RESIDUES 17-157; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT1G70830, MLP28; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PEU-HIS; SOURCE 9 OTHER_DETAILS: WHEAT GERM CELL-FREE, IN VITRO EXPRESSION
KEYWDS AT1G70830, BET V1-LIKE, STRUCTURAL GENOMICS, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, PSI, CENTER FOR EUKARYOTIC STRUCTURAL KEYWDS 3 GENOMICS, CESG, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR B.F.VOLKMAN,N.B.DE LA CRUZ,B.L.LYTLE,F.C.PETERSON,CENTER FOR AUTHOR 2 EUKARYOTIC STRUCTURAL GENOMICS (CESG)
REVDAT 3 29-SEP-09 2I9Y 1 JRNL REVDAT 2 22-APR-08 2I9Y 1 VERSN REVDAT 1 19-SEP-06 2I9Y 0
JRNL AUTH B.L.LYTLE,J.SONG,N.B.DE LA CRUZ,F.C.PETERSON, JRNL AUTH 2 K.A.JOHNSON,C.A.BINGMAN,G.N.PHILLIPS,B.F.VOLKMAN JRNL TITL STRUCTURES OF TWO ARABIDOPSIS THALIANA MAJOR LATEX JRNL TITL 2 PROTEINS REPRESENT NOVEL HELIX-GRIP FOLDS. JRNL REF PROTEINS V. 76 237 2009 JRNL REFN ISSN 0887-3585 JRNL PMID 19326460 JRNL DOI 10.1002/PROT.22396
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR-NIH 2.9.3 REMARK 3 AUTHORS : SCHWIETERS, C.D., KUSZEWSKI, J.J., TJANDRA, N., REMARK 3 CLORE, G.M. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 STRUCTURES ARE BASED ON A TOTAL OF 1766 NOE CONSTRAINTS (597 REMARK 3 INTRA, 423 SEQUENTIAL, 224 MEDIUM AND 522 LONG RANGE REMARK 3 CONSTRAINTS) REMARK 3 AND 197 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS.
REMARK 4 REMARK 4 2I9Y COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-06. REMARK 100 THE RCSB ID CODE IS RCSB039322.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0.002 MM REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.7 MM AT1G70830 U-15N/13C REMARK 210 PROTEIN, 10 MM DEUTERATED BIS- REMARK 210 TRIS, 5 MM DITHIOTHREITOL, 95% REMARK 210 H2O, 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_ REMARK 210 13C-SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY (AROMATIC) REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE 2004, REMARK 210 XEASY 1.3, SPSCAN 1.1.0, REMARK 210 GARANT 2.1, CYANA 2.1 REMARK 210 METHOD USED : AUTOMATED METHODS WERE USED REMARK 210 FOR BACKBONE CHEMICAL SHIFT REMARK 210 ASSIGNMENT AND ITERATIVE NOE REMARK 210 REFINEMENT. FINAL STRUCTURES REMARK 210 WERE OBTAINED BY MOLECULAR REMARK 210 DYNAMICS IN EXPLICIT SOLVENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: ALL TRIPLE-RESONANCE AND NOESY SPECTRA WERE ACQUIRED REMARK 210 USING A CRYOGENIC PROBE.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 HIS A 12 REMARK 465 HIS A 13 REMARK 465 HIS A 14 REMARK 465 LEU A 15 REMARK 465 GLU A 16
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 18 -178.21 63.07 REMARK 500 1 LEU A 22 -22.67 62.04 REMARK 500 1 LYS A 46 90.04 -170.96 REMARK 500 1 HIS A 48 96.50 73.05 REMARK 500 1 HIS A 49 113.21 -177.37 REMARK 500 1 GLN A 59 17.28 -164.34 REMARK 500 1 GLU A 65 139.90 -38.32 REMARK 500 1 THR A 70 -78.93 69.74 REMARK 500 1 ASN A 100 73.00 53.22 REMARK 500 1 LYS A 127 -59.13 -135.56 REMARK 500 2 GLU A 18 -77.49 64.34 REMARK 500 2 LEU A 22 -15.65 55.46 REMARK 500 2 PRO A 47 106.92 -56.44 REMARK 500 2 VAL A 50 100.86 -169.33 REMARK 500 2 ASN A 57 86.22 62.07 REMARK 500 2 HIS A 64 -148.71 -148.08 REMARK 500 2 ASP A 67 -56.74 -169.62 REMARK 500 2 GLU A 108 -80.62 -75.06 REMARK 500 3 GLU A 18 21.76 -142.75 REMARK 500 3 LEU A 22 -40.20 65.61 REMARK 500 3 LYS A 46 111.54 64.75 REMARK 500 3 SER A 54 93.88 67.61 REMARK 500 3 ASN A 57 96.05 62.45 REMARK 500 3 GLN A 59 -168.49 62.49 REMARK 500 3 CYS A 61 -42.66 69.72 REMARK 500 3 ILE A 107 -40.21 -137.37 REMARK 500 3 LYS A 127 -53.97 -129.03 REMARK 500 4 HIS A 64 89.86 66.93 REMARK 500 4 ASP A 67 149.49 70.77 REMARK 500 4 THR A 70 -68.77 72.52 REMARK 500 4 SER A 117 139.26 -172.87 REMARK 500 4 HIS A 150 78.95 -156.91 REMARK 500 5 LEU A 22 -20.93 63.58 REMARK 500 5 LYS A 52 -168.17 67.18 REMARK 500 5 ALA A 53 -46.08 76.56 REMARK 500 5 ILE A 58 99.81 76.47 REMARK 500 5 LEU A 63 -168.85 -105.61 REMARK 500 5 ASP A 67 2.26 -68.48 REMARK 500 5 THR A 70 -64.80 74.79 REMARK 500 5 ALA A 171 72.60 46.33 REMARK 500 5 GLU A 172 -158.46 -134.52 REMARK 500 6 ALA A 19 -14.98 70.39 REMARK 500 6 SER A 51 -43.71 -164.12 REMARK 500 6 LYS A 52 145.69 70.34 REMARK 500 6 ALA A 53 73.33 58.99 REMARK 500 6 SER A 117 141.44 -170.60 REMARK 500 6 ALA A 171 86.93 38.24 REMARK 500 7 LEU A 22 15.38 56.69 REMARK 500 7 HIS A 49 -80.18 63.23 REMARK 500 7 GLN A 59 -62.03 71.77 REMARK 500 7 HIS A 64 -29.48 -146.18 REMARK 500 7 GLU A 65 118.85 80.54 REMARK 500 7 THR A 70 -75.94 60.42 REMARK 500 7 ALA A 171 73.99 60.61 REMARK 500 8 LEU A 22 32.94 -70.24 REMARK 500 8 HIS A 49 170.55 -54.53 REMARK 500 8 VAL A 50 92.79 80.43 REMARK 500 8 ALA A 53 95.45 -62.29 REMARK 500 8 ILE A 58 -56.71 69.89 REMARK 500 8 CYS A 61 135.21 -170.82 REMARK 500 8 LEU A 63 118.94 -160.30 REMARK 500 8 GLU A 65 109.50 66.67 REMARK 500 8 GLU A 108 -92.99 -89.36 REMARK 500 9 LEU A 22 -23.62 68.85 REMARK 500 9 HIS A 48 -46.86 -147.64 REMARK 500 9 HIS A 49 114.38 68.80 REMARK 500 9 LYS A 52 159.17 72.52 REMARK 500 9 PRO A 55 109.67 -56.31 REMARK 500 9 ASN A 57 -70.44 69.34 REMARK 500 9 LEU A 63 83.84 62.93 REMARK 500 9 THR A 70 -71.79 72.47 REMARK 500 9 PRO A 131 39.48 -78.85 REMARK 500 9 ALA A 171 76.49 36.18 REMARK 500 10 ALA A 19 25.88 178.35 REMARK 500 10 ALA A 44 22.21 -79.60 REMARK 500 10 GLU A 108 -72.08 -72.04 REMARK 500 10 SER A 117 145.25 -175.32 REMARK 500 10 LYS A 127 -60.29 -147.01 REMARK 500 11 LEU A 22 -4.66 66.88 REMARK 500 11 LEU A 63 -60.29 -133.85 REMARK 500 11 ASN A 100 75.49 58.98 REMARK 500 12 LYS A 52 -59.19 -134.85 REMARK 500 12 ALA A 53 115.47 64.66 REMARK 500 12 GLN A 59 96.05 71.66 REMARK 500 12 LYS A 127 -67.45 -99.49 REMARK 500 13 GLU A 18 145.89 68.22 REMARK 500 13 SER A 54 145.69 56.61 REMARK 500 13 ILE A 58 98.01 70.96 REMARK 500 13 THR A 70 -68.21 76.48 REMARK 500 13 LYS A 127 -67.13 -164.48 REMARK 500 13 PRO A 131 91.13 -68.09 REMARK 500 13 ALA A 171 78.26 52.80 REMARK 500 14 LEU A 22 -34.43 62.88 REMARK 500 14 ALA A 44 95.49 -177.67 REMARK 500 14 LEU A 63 -63.45 -107.27 REMARK 500 14 THR A 70 -74.37 71.86 REMARK 500 14 PRO A 126 42.56 -69.27 REMARK 500 15 GLU A 18 159.16 175.47 REMARK 500 15 LYS A 52 -80.83 63.47 REMARK 500 15 ALA A 53 -64.37 61.79 REMARK 500 15 PRO A 55 -149.18 -79.01 REMARK 500 15 CYS A 61 162.22 69.42 REMARK 500 15 ASP A 67 93.17 62.36 REMARK 500 15 GLU A 114 -32.07 -133.63 REMARK 500 15 SER A 145 -156.77 -137.98 REMARK 500 15 HIS A 150 85.44 -152.77 REMARK 500 16 LEU A 22 -40.47 62.47 REMARK 500 16 VAL A 50 82.45 64.01 REMARK 500 16 LYS A 52 -66.68 -147.31 REMARK 500 16 ASN A 57 85.89 69.76 REMARK 500 16 CYS A 61 86.17 67.38 REMARK 500 16 LEU A 63 73.18 52.83 REMARK 500 16 GLU A 108 -80.72 -54.72 REMARK 500 16 LYS A 127 -51.37 -142.77 REMARK 500 16 GLU A 172 -169.84 52.66 REMARK 500 17 LEU A 22 -64.13 65.43 REMARK 500 17 VAL A 23 -84.43 48.59 REMARK 500 17 ALA A 44 -67.64 -97.67 REMARK 500 17 HIS A 49 105.78 65.07 REMARK 500 17 ALA A 53 103.56 -179.14 REMARK 500 17 ILE A 58 -60.29 -107.92 REMARK 500 17 CYS A 61 -169.29 -169.66 REMARK 500 17 ASP A 62 -48.21 -156.01 REMARK 500 17 THR A 70 -72.72 72.59 REMARK 500 17 ALA A 171 15.27 59.68 REMARK 500 17 GLU A 172 166.72 62.09 REMARK 500 18 HIS A 49 89.14 55.48 REMARK 500 18 SER A 51 93.96 -160.60 REMARK 500 18 LYS A 52 -68.23 -178.73 REMARK 500 18 CYS A 61 -66.67 71.07 REMARK 500 18 GLU A 65 -90.51 -146.68 REMARK 500 18 THR A 70 -76.93 67.68 REMARK 500 18 GLU A 108 -80.85 40.07 REMARK 500 18 SER A 145 -78.13 -120.96 REMARK 500 18 GLU A 146 -51.37 156.45 REMARK 500 19 LYS A 33 -145.73 -93.69 REMARK 500 19 ALA A 34 -162.05 64.60 REMARK 500 19 HIS A 49 -44.59 -160.08 REMARK 500 19 VAL A 50 87.18 69.61 REMARK 500 19 LYS A 52 172.86 65.68 REMARK 500 19 GLU A 108 -92.85 -86.54 REMARK 500 19 ALA A 171 -162.82 -79.69 REMARK 500 20 ALA A 19 21.68 -143.52 REMARK 500 20 LEU A 22 17.62 58.16 REMARK 500 20 ALA A 53 -160.34 57.95 REMARK 500 20 THR A 70 -60.18 75.77 REMARK 500 20 ALA A 171 -74.72 50.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (11X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 3 GLU A 108 24.6 L L OUTSIDE RANGE REMARK 500 16 GLU A 108 22.7 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.74365 RELATED DB: TARGETDB
DBREF 2I9Y A 17 173 UNP Q9SSK9 MLP28_ARATH 17 173
SEQADV 2I9Y GLY A 8 UNP Q9SSK9 EXPRESSION TAG SEQADV 2I9Y HIS A 9 UNP Q9SSK9 EXPRESSION TAG SEQADV 2I9Y HIS A 10 UNP Q9SSK9 EXPRESSION TAG SEQADV 2I9Y HIS A 11 UNP Q9SSK9 EXPRESSION TAG SEQADV 2I9Y HIS A 12 UNP Q9SSK9 EXPRESSION TAG SEQADV 2I9Y HIS A 13 UNP Q9SSK9 EXPRESSION TAG SEQADV 2I9Y HIS A 14 UNP Q9SSK9 EXPRESSION TAG SEQADV 2I9Y LEU A 15 UNP Q9SSK9 EXPRESSION TAG SEQADV 2I9Y GLU A 16 UNP Q9SSK9 EXPRESSION TAG
SEQRES 1 A 166 GLY HIS HIS HIS HIS HIS HIS LEU GLU THR GLU ALA SER SEQRES 2 A 166 SER LEU VAL GLY LYS LEU GLU THR ASP VAL GLU ILE LYS SEQRES 3 A 166 ALA SER ALA ASP LYS PHE HIS HIS MET PHE ALA GLY LYS SEQRES 4 A 166 PRO HIS HIS VAL SER LYS ALA SER PRO GLY ASN ILE GLN SEQRES 5 A 166 GLY CYS ASP LEU HIS GLU GLY ASP TRP GLY THR VAL GLY SEQRES 6 A 166 SER ILE VAL PHE TRP ASN TYR VAL HIS ASP GLY GLU ALA SEQRES 7 A 166 LYS VAL ALA LYS GLU ARG ILE GLU ALA VAL GLU PRO ASP SEQRES 8 A 166 LYS ASN LEU ILE THR PHE ARG VAL ILE GLU GLY ASP LEU SEQRES 9 A 166 MET LYS GLU TYR LYS SER PHE LEU LEU THR ILE GLN VAL SEQRES 10 A 166 THR PRO LYS PRO GLY GLY PRO GLY SER ILE VAL HIS TRP SEQRES 11 A 166 HIS LEU GLU TYR GLU LYS ILE SER GLU GLU VAL ALA HIS SEQRES 12 A 166 PRO GLU THR LEU LEU GLN PHE CYS VAL GLU VAL SER LYS SEQRES 13 A 166 GLU ILE ASP GLU HIS LEU LEU ALA GLU GLU
HELIX 1 1 SER A 35 HIS A 41 1 7 HELIX 2 2 MET A 42 ALA A 44 5 3 HELIX 3 3 ASP A 110 LYS A 113 5 4 HELIX 4 4 PRO A 151 ALA A 171 1 21
SHEET 1 A 6 VAL A 23 ILE A 32 0 SHEET 2 A 6 GLY A 132 LYS A 143 -1 O TYR A 141 N GLY A 24 SHEET 3 A 6 TYR A 115 GLY A 129 -1 N THR A 121 O HIS A 138 SHEET 4 A 6 LEU A 101 VAL A 106 -1 N PHE A 104 O LEU A 120 SHEET 5 A 6 GLU A 84 GLU A 96 -1 N ALA A 94 O THR A 103 SHEET 6 A 6 PHE A 76 HIS A 81 -1 N TYR A 79 O LYS A 86
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000