10 20 30 40 50 60 70 80 2HVZ - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 31-JUL-06 2HVZ
TITLE SOLUTION STRUCTURE OF THE RRM DOMAIN OF SR RICH FACTOR 9G8
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPLICING FACTOR, ARGININE/SERINE-RICH 7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RRM (AMINO ACIDS K12-R98); COMPND 5 SYNONYM: SPLICING FACTOR 9G8; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFRS7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21/RP; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24B
KEYWDS RRM, RNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.M.TINTARU,G.M.HAUTBERGUE,A.P.GOLOVANOV,L.Y.LIAN,S.A.WILSON
REVDAT 2 24-FEB-09 2HVZ 1 VERSN REVDAT 1 21-NOV-06 2HVZ 0
JRNL AUTH Y.HARGOUS,G.M.HAUTBERGUE,A.M.TINTARU,L.SKRISOVSKA, JRNL AUTH 2 A.P.GOLOVANOV,J.STEVENIN,L.Y.LIAN,S.A.WILSON, JRNL AUTH 3 F.H.ALLAIN JRNL TITL MOLECULAR BASIS OF RNA RECOGNITION AND TAP BINDING JRNL TITL 2 BY THE SR PROTEINS SRP20 AND 9G8. JRNL REF EMBO J. V. 25 5126 2006 JRNL REFN ISSN 0261-4189 JRNL PMID 17036044 JRNL DOI 10.1038/SJ.EMBOJ.7601385
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : AMBER 7.0 REMARK 3 AUTHORS : CASE DA, CHEATHAM TE 3RD, DARDEN T, GOHLKE H, REMARK 3 LUO R, MERZ KM JR, ONUFRIEV A, SIMMERLING C, REMARK 3 WANG B, WOODS RJ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL REMARK 3 OF 1138 RESTRAINTS, 951 ARE NOE-DERIVED DISTANCE CONSTRAINTS, REMARK 3 119 DIHEDRAL ANGLE RESTRAINTS AND 68 DISTANCE RESTRAINTS FROM REMARK 3 HYDROGEN BONDS
REMARK 4 REMARK 4 2HVZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-06. REMARK 100 THE RCSB ID CODE IS RCSB038826.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : NMR SAMPLE: 13C, 15N-9G8 RRM REMARK 210 AT 0.6 MM BUFFER CONDITIONS: REMARK 210 20MM CH3COONA (PH=5.5), 25MM L REMARK 210 -ARG, 50MM L-GLU, 5MM EDTA, REMARK 210 10MM DTT; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY, 2D TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE 1.0, REMARK 210 NMRVIEW 5.01, CYANA 2.1 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE 9G8 SEQUENCE STARTS AT K2 AND FINISHES AT R88, REMARK 210 CORRESPONDING TO K12 AND R98, RESPECTIVELY. ALL THE OTHER REMARK 210 AMINO-ACIDS ARE PART OF THE T7 AND HISTIDINE TAGS.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 7 63.63 63.97 REMARK 500 1 THR A 10 36.65 -175.93 REMARK 500 1 VAL A 61 162.87 -47.39 REMARK 500 1 SER A 79 -171.60 -67.76 REMARK 500 1 LYS A 89 -74.83 -94.74 REMARK 500 1 LEU A 90 98.22 59.62 REMARK 500 1 LEU A 91 -39.67 -165.74 REMARK 500 2 ASN A 7 72.62 63.81 REMARK 500 2 THR A 10 37.58 -175.99 REMARK 500 2 VAL A 61 155.54 -47.80 REMARK 500 2 ARG A 87 -56.59 -122.93 REMARK 500 2 ARG A 88 85.37 53.41 REMARK 500 2 LEU A 90 91.08 -169.37 REMARK 500 2 LEU A 94 132.47 -173.34 REMARK 500 2 PHE A 95 88.35 -155.09 REMARK 500 2 ASN A 96 45.25 -155.38 REMARK 500 3 ASN A 7 69.09 62.75 REMARK 500 3 THR A 10 36.15 -166.37 REMARK 500 3 THR A 29 115.57 -162.53 REMARK 500 3 VAL A 61 159.61 -48.99 REMARK 500 3 SER A 79 -179.14 -68.02 REMARK 500 3 ARG A 80 49.41 -82.52 REMARK 500 3 ARG A 88 -178.74 57.40 REMARK 500 3 LYS A 89 160.60 63.36 REMARK 500 3 LEU A 90 76.92 -166.86 REMARK 500 3 ASN A 96 26.08 -152.60 REMARK 500 4 ASN A 7 73.27 64.92 REMARK 500 4 THR A 10 40.10 -93.30 REMARK 500 4 LYS A 60 -157.56 -133.62 REMARK 500 4 ARG A 88 -177.85 56.91 REMARK 500 4 LEU A 91 -53.51 -164.80 REMARK 500 5 ASN A 7 66.77 62.14 REMARK 500 5 VAL A 61 151.69 -48.49 REMARK 500 5 ARG A 66 48.88 -87.39 REMARK 500 5 VAL A 67 173.26 -59.80 REMARK 500 5 ARG A 87 24.54 -159.79 REMARK 500 5 ARG A 88 -176.64 55.83 REMARK 500 5 LYS A 89 -75.31 -55.21 REMARK 500 5 LEU A 90 87.99 51.84 REMARK 500 5 LEU A 91 -35.10 -178.59 REMARK 500 5 LEU A 94 137.82 -179.35 REMARK 500 5 ASN A 96 26.32 -162.40 REMARK 500 6 ASN A 7 70.60 63.28 REMARK 500 6 LEU A 8 67.35 -115.09 REMARK 500 6 THR A 10 25.06 -160.86 REMARK 500 6 VAL A 61 151.60 -48.36 REMARK 500 6 ALA A 86 83.85 -69.80 REMARK 500 6 LEU A 91 -55.56 -158.23 REMARK 500 7 LYS A 60 -155.81 -132.92 REMARK 500 7 ARG A 88 96.06 58.29 REMARK 500 7 LYS A 89 -173.02 63.30 REMARK 500 7 LEU A 91 -47.22 -134.25 REMARK 500 7 LEU A 94 131.89 -174.02 REMARK 500 7 ASN A 96 31.38 -169.57 REMARK 500 8 ASN A 7 64.96 62.59 REMARK 500 8 THR A 10 32.42 -175.74 REMARK 500 8 LYS A 60 -157.31 -137.99 REMARK 500 8 ARG A 87 -60.02 -103.22 REMARK 500 8 LYS A 89 160.70 63.45 REMARK 500 8 LEU A 90 29.72 -156.88 REMARK 500 8 LEU A 91 -5.87 76.50 REMARK 500 8 PHE A 95 92.43 -178.92 REMARK 500 9 ASN A 7 72.17 62.93 REMARK 500 9 LEU A 8 -166.27 -113.31 REMARK 500 9 THR A 10 32.93 -147.87 REMARK 500 9 VAL A 61 150.84 -46.77 REMARK 500 9 ARG A 66 48.77 -87.54 REMARK 500 9 SER A 79 -170.44 -68.56 REMARK 500 9 ARG A 87 35.19 179.97 REMARK 500 9 LEU A 90 95.54 -176.88 REMARK 500 9 LEU A 91 -59.09 -165.77 REMARK 500 9 LEU A 94 133.62 -172.80 REMARK 500 10 ASN A 7 65.19 62.35 REMARK 500 10 LEU A 8 54.93 -99.32 REMARK 500 10 THR A 10 -31.74 178.27 REMARK 500 10 ARG A 66 47.61 -88.25 REMARK 500 10 VAL A 67 177.75 -55.79 REMARK 500 10 ARG A 87 22.85 -148.60 REMARK 500 11 ASN A 7 60.44 60.82 REMARK 500 11 THR A 10 22.91 -146.90 REMARK 500 11 LYS A 60 -154.82 -142.87 REMARK 500 11 ARG A 80 49.40 -83.02 REMARK 500 11 ARG A 88 176.23 58.46 REMARK 500 11 LYS A 89 -169.92 -179.31 REMARK 500 11 LEU A 90 26.67 -161.73 REMARK 500 11 LEU A 94 149.93 -179.08 REMARK 500 12 ASN A 7 69.48 61.49 REMARK 500 12 VAL A 61 154.25 -47.58 REMARK 500 12 ARG A 87 32.97 -142.16 REMARK 500 12 LEU A 90 -75.76 -56.41 REMARK 500 12 LEU A 91 -6.46 76.81 REMARK 500 12 PHE A 95 105.06 -160.76 REMARK 500 12 ASN A 96 36.17 -169.36 REMARK 500 13 ASN A 7 70.05 61.39 REMARK 500 13 THR A 10 41.64 -176.46 REMARK 500 13 VAL A 61 150.09 -48.28 REMARK 500 13 ARG A 66 48.94 -87.69 REMARK 500 13 ALA A 86 48.27 -89.06 REMARK 500 13 ARG A 88 -177.28 56.57 REMARK 500 13 LYS A 89 -176.74 -60.20 REMARK 500 13 LEU A 91 -42.66 -177.88 REMARK 500 13 PHE A 95 -178.99 -55.49 REMARK 500 13 ASN A 96 25.33 -148.29 REMARK 500 14 ASN A 7 66.14 63.13 REMARK 500 14 LEU A 8 56.19 -103.94 REMARK 500 14 THR A 10 -32.17 178.24 REMARK 500 14 VAL A 61 152.02 -47.94 REMARK 500 14 ARG A 66 45.90 -86.84 REMARK 500 14 ARG A 87 28.81 -167.73 REMARK 500 14 ARG A 88 98.34 -65.91 REMARK 500 14 LYS A 89 -75.06 -155.17 REMARK 500 14 LEU A 90 79.61 63.27 REMARK 500 14 LEU A 91 -48.49 -155.80 REMARK 500 14 ASN A 96 26.76 -159.45 REMARK 500 15 ASN A 7 73.46 64.69 REMARK 500 15 THR A 10 31.03 -172.77 REMARK 500 15 ARG A 66 48.74 -87.57 REMARK 500 15 ARG A 87 23.09 -156.74 REMARK 500 15 LYS A 89 -169.08 -174.05 REMARK 500 15 LEU A 90 47.59 -168.00 REMARK 500 15 LEU A 91 -40.34 -162.34 REMARK 500 15 PHE A 95 74.56 -151.97 REMARK 500 15 ASN A 96 37.08 -174.15 REMARK 500 16 ASN A 7 61.50 62.63 REMARK 500 16 THR A 10 -33.03 178.77 REMARK 500 16 ARG A 66 48.74 -87.70 REMARK 500 16 ARG A 88 103.46 -51.57 REMARK 500 16 LEU A 94 141.94 -173.57 REMARK 500 16 ASN A 96 56.14 -159.12 REMARK 500 17 ASN A 7 72.76 63.42 REMARK 500 17 THR A 10 54.03 -177.82 REMARK 500 17 ARG A 87 -61.02 -107.39 REMARK 500 17 LEU A 90 86.34 56.44 REMARK 500 17 LEU A 91 -44.75 -140.71 REMARK 500 17 PHE A 95 98.59 -177.50 REMARK 500 17 ASN A 96 45.70 -178.40 REMARK 500 18 ASN A 7 63.04 63.82 REMARK 500 18 THR A 10 -33.15 179.16 REMARK 500 18 VAL A 61 163.01 -48.44 REMARK 500 18 ARG A 88 94.93 58.27 REMARK 500 18 LEU A 90 26.09 -156.27 REMARK 500 18 LEU A 91 -4.21 75.71 REMARK 500 19 ASN A 7 72.58 64.45 REMARK 500 19 LEU A 8 78.17 -117.86 REMARK 500 19 THR A 10 32.10 -150.32 REMARK 500 19 ARG A 66 49.38 -87.28 REMARK 500 19 LEU A 90 -75.67 -56.60 REMARK 500 19 LEU A 91 -4.20 75.64 REMARK 500 20 ASN A 7 75.11 65.49 REMARK 500 20 LEU A 8 -165.41 -103.72 REMARK 500 20 THR A 10 66.41 36.08 REMARK 500 20 ARG A 66 49.48 -87.76 REMARK 500 20 ALA A 86 86.02 -68.66 REMARK 500 20 ARG A 87 25.79 -142.36 REMARK 500 20 LEU A 90 -75.60 -57.64 REMARK 500 20 LEU A 91 -2.39 74.86 REMARK 500 20 LEU A 94 133.93 -174.38 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2HVZ A 2 88 UNP Q16629 SFRS7_HUMAN 12 98
SEQADV 2HVZ MET A 1 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LYS A 89 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LEU A 90 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LEU A 91 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ GLU A 92 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ VAL A 93 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LEU A 94 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ PHE A 95 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ ASN A 96 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ GLY A 97 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ PRO A 98 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ LEU A 99 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ GLU A 100 UNP Q16629 CLONING ARTIFACT SEQADV 2HVZ HIS A 101 UNP Q16629 CLONING ARTIFACT
SEQRES 1 A 101 MET LYS VAL TYR VAL GLY ASN LEU GLY THR GLY ALA GLY SEQRES 2 A 101 LYS GLY GLU LEU GLU ARG ALA PHE SER TYR TYR GLY PRO SEQRES 3 A 101 LEU ARG THR VAL TRP ILE ALA ARG ASN PRO PRO GLY PHE SEQRES 4 A 101 ALA PHE VAL GLU PHE GLU ASP PRO ARG ASP ALA GLU ASP SEQRES 5 A 101 ALA VAL ARG GLY LEU ASP GLY LYS VAL ILE CYS GLY SER SEQRES 6 A 101 ARG VAL ARG VAL GLU LEU SER THR GLY MET PRO ARG ARG SEQRES 7 A 101 SER ARG PHE ASP ARG PRO PRO ALA ARG ARG LYS LEU LEU SEQRES 8 A 101 GLU VAL LEU PHE ASN GLY PRO LEU GLU HIS
HELIX 1 1 GLY A 13 GLY A 25 1 13 HELIX 2 2 ASP A 46 LYS A 60 1 15
SHEET 1 A 4 THR A 29 ALA A 33 0 SHEET 2 A 4 PHE A 39 GLU A 43 -1 O GLU A 43 N THR A 29 SHEET 3 A 4 LYS A 2 GLY A 6 -1 N VAL A 3 O VAL A 42 SHEET 4 A 4 ARG A 68 LEU A 71 -1 O ARG A 68 N GLY A 6
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000