10 20 30 40 50 60 70 80 2HSI - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-JUL-06 2HSI
TITLE CRYSTAL STRUCTURE OF PUTATIVE PEPTIDASE M23 FROM TITLE 2 PSEUDOMONAS AERUGINOSA, NEW YORK STRUCTURAL GENOMICS TITLE 3 CONSORTIUM
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE PEPTIDASE M23; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA PAO1; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: PA01; SOURCE 5 GENE: PA3787; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: TOPO
KEYWDS PEPTIDASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, NYSGXRC, UNKNOWN FUNCTION
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.PATSKOVSKY,S.C.ALMO,S.K.BURLEY,NEW YORK SGX RESEARCH AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (NYSGXRC)
REVDAT 2 24-FEB-09 2HSI 1 VERSN REVDAT 1 08-AUG-06 2HSI 0
JRNL AUTH Y.PATSKOVSKY,U.RAMAGOPAL,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF M23 PEPTIDASE FROM JRNL TITL 2 PSEUDOMONAS AERUGINOSA JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 42302 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1360 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3061 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3484 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 485 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : -0.55000 REMARK 3 B12 (A**2) : 0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.152 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.144 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.523 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.937 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3580 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4858 ; 1.327 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 461 ; 7.165 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 147 ;31.598 ;22.925 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 573 ;14.602 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;12.153 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 525 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2750 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1752 ; 0.145 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2332 ; 0.305 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 659 ; 0.164 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.035 ; 0.500 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 56 ; 0.132 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 48 ; 0.170 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2336 ; 3.687 ; 2.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3668 ; 4.375 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1385 ; 5.566 ; 3.500 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1184 ; 7.839 ; 5.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 25 A 104 1 REMARK 3 1 B 25 B 104 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 624 ; 0.10 ; 0.10 REMARK 3 TIGHT THERMAL 1 A (A**2): 624 ; 0.40 ; 1.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 126 A 281 1 REMARK 3 1 B 126 B 280 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 1067 ; 0.08 ; 0.10 REMARK 3 TIGHT THERMAL 2 A (A**2): 1067 ; 0.38 ; 1.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS
REMARK 4 REMARK 4 2HSI COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JUL-06. REMARK 100 THE RCSB ID CODE IS RCSB038708.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43712 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : 0.04800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.46000 REMARK 200 R SYM FOR SHELL (I) : 0.46000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2GU1 REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, 0.2 M AMMONIUM REMARK 280 ACETATE, 25% PEG 3350, 10% GLYCEROL, PH 6.50, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 290K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.72700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.45400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.59050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 69.31750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.86350 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ARG A 3 REMARK 465 THR A 4 REMARK 465 LEU A 5 REMARK 465 ALA A 6 REMARK 465 PHE A 7 REMARK 465 VAL A 8 REMARK 465 SER A 9 REMARK 465 THR A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 LEU A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 PHE A 16 REMARK 465 CYS A 17 REMARK 465 ALA A 18 REMARK 465 LEU A 19 REMARK 465 PRO A 20 REMARK 465 ALA A 21 REMARK 465 GLN A 22 REMARK 465 ALA A 23 REMARK 465 ASP A 24 REMARK 465 HIS A 106 REMARK 465 TYR A 107 REMARK 465 ARG A 108 REMARK 465 GLU A 109 REMARK 465 GLN A 110 REMARK 465 ARG A 111 REMARK 465 ILE A 112 REMARK 465 THR A 113 REMARK 465 LEU A 114 REMARK 465 LYS A 115 REMARK 465 ASN A 116 REMARK 465 LYS A 117 REMARK 465 ARG A 118 REMARK 465 GLN A 119 REMARK 465 VAL A 120 REMARK 465 ASN A 121 REMARK 465 PRO A 122 REMARK 465 LEU A 123 REMARK 465 GLY A 167 REMARK 465 LEU A 168 REMARK 465 ARG A 169 REMARK 465 ARG A 170 REMARK 465 PHE A 171 REMARK 465 PHE A 172 REMARK 465 ASN A 173 REMARK 465 GLY A 174 REMARK 465 GLU A 175 REMARK 465 GLU A 176 REMARK 465 ARG A 177 REMARK 465 ASN A 178 REMARK 465 PRO A 282 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 ARG B 3 REMARK 465 THR B 4 REMARK 465 LEU B 5 REMARK 465 ALA B 6 REMARK 465 PHE B 7 REMARK 465 VAL B 8 REMARK 465 SER B 9 REMARK 465 THR B 10 REMARK 465 LEU B 11 REMARK 465 LEU B 12 REMARK 465 LEU B 13 REMARK 465 ALA B 14 REMARK 465 ALA B 15 REMARK 465 PHE B 16 REMARK 465 CYS B 17 REMARK 465 ALA B 18 REMARK 465 LEU B 19 REMARK 465 PRO B 20 REMARK 465 ALA B 21 REMARK 465 GLN B 22 REMARK 465 ALA B 23 REMARK 465 ASP B 24 REMARK 465 HIS B 106 REMARK 465 TYR B 107 REMARK 465 ARG B 108 REMARK 465 GLU B 109 REMARK 465 GLN B 110 REMARK 465 ARG B 111 REMARK 465 ILE B 112 REMARK 465 THR B 113 REMARK 465 LEU B 114 REMARK 465 LYS B 115 REMARK 465 ASN B 116 REMARK 465 LYS B 117 REMARK 465 ARG B 118 REMARK 465 GLN B 119 REMARK 465 VAL B 120 REMARK 465 ASN B 121 REMARK 465 PRO B 122 REMARK 465 LEU B 168 REMARK 465 ARG B 169 REMARK 465 ARG B 170 REMARK 465 PHE B 171 REMARK 465 PHE B 172 REMARK 465 ASN B 173 REMARK 465 GLY B 174 REMARK 465 GLU B 175 REMARK 465 GLU B 176 REMARK 465 ARG B 177 REMARK 465 ASN B 178 REMARK 465 GLN B 281 REMARK 465 PRO B 282
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 68 -118.72 -103.41 REMARK 500 SER A 163 -110.12 -112.96 REMARK 500 ARG B 68 -118.13 -106.17 REMARK 500 SER B 163 -109.73 -109.15 REMARK 500 PHE B 166 80.08 28.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO B 165 PHE B 166 56.04 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 283 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 180 NE2 REMARK 620 2 ASP A 184 OD1 109.0 REMARK 620 3 HIS A 259 NE2 138.1 83.9 REMARK 620 4 HIS A 261 ND1 102.8 108.9 110.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 283 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 180 NE2 REMARK 620 2 ASP B 184 OD1 102.3 REMARK 620 3 HIS B 259 NE2 136.4 84.6 REMARK 620 4 HIS B 261 ND1 99.0 107.5 120.1 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 283 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 283
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-T2100 RELATED DB: TARGETDB
DBREF 2HSI A 1 282 UNP Q9HXK8 Q9HXK8_PSEAE 1 282 DBREF 2HSI B 1 282 UNP Q9HXK8 Q9HXK8_PSEAE 1 282
SEQRES 1 A 282 MET PRO ARG THR LEU ALA PHE VAL SER THR LEU LEU LEU SEQRES 2 A 282 ALA ALA PHE CYS ALA LEU PRO ALA GLN ALA ASP SER PHE SEQRES 3 A 282 ILE MET ARG LEU LEU ASN LYS PRO VAL PRO GLY GLY VAL SEQRES 4 A 282 ALA VAL VAL ASP LEU GLY GLU GLU GLY PRO PRO PRO ARG SEQRES 5 A 282 ALA PHE TYR GLN GLY LYS PRO VAL LEU VAL VAL ARG GLU SEQRES 6 A 282 GLU GLY ARG ARG TRP ILE ALA VAL VAL GLY ILE PRO LEU SEQRES 7 A 282 SER THR LYS PRO GLY PRO GLN LYS LEU GLU VAL ARG ALA SEQRES 8 A 282 ALA THR GLY ASN HIS GLU GLU ARG PHE SER VAL GLY SER SEQRES 9 A 282 LYS HIS TYR ARG GLU GLN ARG ILE THR LEU LYS ASN LYS SEQRES 10 A 282 ARG GLN VAL ASN PRO LEU PRO GLU ASP LEU LYS ARG ILE SEQRES 11 A 282 GLU ARG GLU LEU ALA GLU GLN THR ALA ALA TYR ARG ARG SEQRES 12 A 282 PHE SER PRO GLY LEU PRO SER ASN LEU MET LEU ASP LYS SEQRES 13 A 282 PRO VAL ASP GLY PRO LEU SER SER PRO PHE GLY LEU ARG SEQRES 14 A 282 ARG PHE PHE ASN GLY GLU GLU ARG ASN PRO HIS SER GLY SEQRES 15 A 282 LEU ASP PHE ALA VAL PRO ALA GLY THR PRO ILE LYS ALA SEQRES 16 A 282 PRO ALA ALA GLY LYS VAL ILE LEU ILE GLY ASP TYR PHE SEQRES 17 A 282 PHE ASN GLY LYS THR VAL PHE VAL ASP HIS GLY GLN GLY SEQRES 18 A 282 PHE ILE SER MET PHE CYS HIS LEU SER LYS ILE ASP VAL SEQRES 19 A 282 LYS LEU GLY GLN GLN VAL PRO ARG GLY GLY VAL LEU GLY SEQRES 20 A 282 LYS VAL GLY ALA THR GLY ARG ALA THR GLY PRO HIS MET SEQRES 21 A 282 HIS TRP ASN VAL SER LEU ASN ASP ALA ARG VAL ASP PRO SEQRES 22 A 282 ALA ILE PHE ILE GLY ALA PHE GLN PRO SEQRES 1 B 282 MET PRO ARG THR LEU ALA PHE VAL SER THR LEU LEU LEU SEQRES 2 B 282 ALA ALA PHE CYS ALA LEU PRO ALA GLN ALA ASP SER PHE SEQRES 3 B 282 ILE MET ARG LEU LEU ASN LYS PRO VAL PRO GLY GLY VAL SEQRES 4 B 282 ALA VAL VAL ASP LEU GLY GLU GLU GLY PRO PRO PRO ARG SEQRES 5 B 282 ALA PHE TYR GLN GLY LYS PRO VAL LEU VAL VAL ARG GLU SEQRES 6 B 282 GLU GLY ARG ARG TRP ILE ALA VAL VAL GLY ILE PRO LEU SEQRES 7 B 282 SER THR LYS PRO GLY PRO GLN LYS LEU GLU VAL ARG ALA SEQRES 8 B 282 ALA THR GLY ASN HIS GLU GLU ARG PHE SER VAL GLY SER SEQRES 9 B 282 LYS HIS TYR ARG GLU GLN ARG ILE THR LEU LYS ASN LYS SEQRES 10 B 282 ARG GLN VAL ASN PRO LEU PRO GLU ASP LEU LYS ARG ILE SEQRES 11 B 282 GLU ARG GLU LEU ALA GLU GLN THR ALA ALA TYR ARG ARG SEQRES 12 B 282 PHE SER PRO GLY LEU PRO SER ASN LEU MET LEU ASP LYS SEQRES 13 B 282 PRO VAL ASP GLY PRO LEU SER SER PRO PHE GLY LEU ARG SEQRES 14 B 282 ARG PHE PHE ASN GLY GLU GLU ARG ASN PRO HIS SER GLY SEQRES 15 B 282 LEU ASP PHE ALA VAL PRO ALA GLY THR PRO ILE LYS ALA SEQRES 16 B 282 PRO ALA ALA GLY LYS VAL ILE LEU ILE GLY ASP TYR PHE SEQRES 17 B 282 PHE ASN GLY LYS THR VAL PHE VAL ASP HIS GLY GLN GLY SEQRES 18 B 282 PHE ILE SER MET PHE CYS HIS LEU SER LYS ILE ASP VAL SEQRES 19 B 282 LYS LEU GLY GLN GLN VAL PRO ARG GLY GLY VAL LEU GLY SEQRES 20 B 282 LYS VAL GLY ALA THR GLY ARG ALA THR GLY PRO HIS MET SEQRES 21 B 282 HIS TRP ASN VAL SER LEU ASN ASP ALA ARG VAL ASP PRO SEQRES 22 B 282 ALA ILE PHE ILE GLY ALA PHE GLN PRO
HET ZN B 283 1 HET ZN A 283 1
HETNAM ZN ZINC ION
FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *485(H2 O)
HELIX 1 1 SER A 25 ASN A 32 1 8 HELIX 2 2 ASP A 126 ARG A 142 1 17 HELIX 3 3 ASP A 272 GLY A 278 1 7 HELIX 4 4 SER B 25 ASN B 32 1 8 HELIX 5 5 LEU B 123 ARG B 142 1 20 HELIX 6 6 ASP B 272 GLY B 278 1 7
SHEET 1 A 6 VAL A 39 ASP A 43 0 SHEET 2 A 6 TRP A 70 GLY A 75 -1 O VAL A 74 N ALA A 40 SHEET 3 A 6 LYS A 58 ARG A 64 -1 N VAL A 63 O ILE A 71 SHEET 4 A 6 ARG A 52 TYR A 55 -1 N TYR A 55 O LYS A 58 SHEET 5 A 6 GLY A 83 ARG A 90 -1 O ARG A 90 N ARG A 52 SHEET 6 A 6 HIS A 96 VAL A 102 -1 O HIS A 96 N VAL A 89 SHEET 1 B 6 LEU A 183 PHE A 185 0 SHEET 2 B 6 MET A 260 LEU A 266 -1 O TRP A 262 N LEU A 183 SHEET 3 B 6 PHE A 222 LEU A 229 -1 N ILE A 223 O SER A 265 SHEET 4 B 6 GLY A 211 GLY A 219 -1 N VAL A 216 O SER A 224 SHEET 5 B 6 GLY A 199 TYR A 207 -1 N LYS A 200 O ASP A 217 SHEET 6 B 6 GLN A 239 VAL A 240 -1 O VAL A 240 N GLY A 199 SHEET 1 C 3 LEU A 183 PHE A 185 0 SHEET 2 C 3 MET A 260 LEU A 266 -1 O TRP A 262 N LEU A 183 SHEET 3 C 3 ALA A 269 VAL A 271 -1 O VAL A 271 N VAL A 264 SHEET 1 D 3 PRO A 192 LYS A 194 0 SHEET 2 D 3 VAL A 245 LYS A 248 -1 O LEU A 246 N ILE A 193 SHEET 3 D 3 LYS A 231 ILE A 232 -1 N LYS A 231 O LYS A 248 SHEET 1 E 6 VAL B 39 ASP B 43 0 SHEET 2 E 6 TRP B 70 GLY B 75 -1 O VAL B 74 N ALA B 40 SHEET 3 E 6 LYS B 58 ARG B 64 -1 N VAL B 63 O ILE B 71 SHEET 4 E 6 ARG B 52 TYR B 55 -1 N TYR B 55 O LYS B 58 SHEET 5 E 6 GLY B 83 ARG B 90 -1 O ARG B 90 N ARG B 52 SHEET 6 E 6 HIS B 96 VAL B 102 -1 O HIS B 96 N VAL B 89 SHEET 1 F 6 LEU B 183 PHE B 185 0 SHEET 2 F 6 MET B 260 LEU B 266 -1 O TRP B 262 N LEU B 183 SHEET 3 F 6 PHE B 222 LEU B 229 -1 N MET B 225 O ASN B 263 SHEET 4 F 6 GLY B 211 GLY B 219 -1 N VAL B 216 O SER B 224 SHEET 5 F 6 GLY B 199 TYR B 207 -1 N LYS B 200 O ASP B 217 SHEET 6 F 6 GLN B 239 VAL B 240 -1 O VAL B 240 N GLY B 199 SHEET 1 G 3 LEU B 183 PHE B 185 0 SHEET 2 G 3 MET B 260 LEU B 266 -1 O TRP B 262 N LEU B 183 SHEET 3 G 3 ALA B 269 VAL B 271 -1 O VAL B 271 N VAL B 264 SHEET 1 H 3 PRO B 192 LYS B 194 0 SHEET 2 H 3 VAL B 245 LYS B 248 -1 O GLY B 247 N ILE B 193 SHEET 3 H 3 LYS B 231 ILE B 232 -1 N LYS B 231 O LYS B 248
LINK NE2 HIS A 180 ZN ZN A 283 1555 1555 2.20 LINK OD1 ASP A 184 ZN ZN A 283 1555 1555 1.98 LINK NE2 HIS A 259 ZN ZN A 283 1555 1555 2.37 LINK ND1 HIS A 261 ZN ZN A 283 1555 1555 2.11 LINK NE2 HIS B 180 ZN ZN B 283 1555 1555 2.35 LINK OD1 ASP B 184 ZN ZN B 283 1555 1555 2.09 LINK NE2 HIS B 259 ZN ZN B 283 1555 1555 2.21 LINK ND1 HIS B 261 ZN ZN B 283 1555 1555 2.03
CISPEP 1 PRO A 124 GLU A 125 0 -11.04 CISPEP 2 PRO A 165 PHE A 166 0 29.92 CISPEP 3 PHE A 280 GLN A 281 0 9.11
SITE 1 AC1 4 HIS B 180 ASP B 184 HIS B 259 HIS B 261 SITE 1 AC2 5 HIS A 180 ASP A 184 HIS A 259 HIS A 261 SITE 2 AC2 5 HOH A 418
CRYST1 108.313 108.313 83.181 90.00 90.00 120.00 P 61 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009233 0.005330 0.000000 0.00000
SCALE2 0.000000 0.010661 0.000000 0.00000
SCALE3 0.000000 0.000000 0.012022 0.00000