10 20 30 40 50 60 70 80 2H9Z - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-JUN-06 2H9Z
TITLE SOLUTION STRUCTURE OF HYPOTHETICAL PROTEIN, HP0495 FROM TITLE 2 HELICOBACTER PYLORI
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN HP0495; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 210; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS FEREDOXIN-LIKE (BETA-ALPHA-BETA-BETA-ALPHA-BETA), KEYWDS 2 STRUCTURAL GENOMICS, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.D.SEO,S.J.PARK,H.J.KIM,B.J.LEE
REVDAT 2 24-FEB-09 2H9Z 1 VERSN REVDAT 1 01-MAY-07 2H9Z 0
JRNL AUTH M.D.SEO,S.J.PARK,H.J.KIM,B.J.LEE JRNL TITL SOLUTION STRUCTURE OF HYPOTHETICAL PROTEIN, HP0495 JRNL TITL 2 (Y495_HELPY) FROM HELICOBACTER PYLORI. JRNL REF PROTEINS V. 67 1189 2007 JRNL REFN ISSN 0887-3585 JRNL PMID 17373705 JRNL DOI 10.1002/PROT.21346
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, REMARK 3 RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2H9Z COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUN-06. REMARK 100 THE RCSB ID CODE IS RCSB038115.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 150MM SALT REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM HP0495, U-15N, 13C; REMARK 210 50MM PHOSPHATE BUFFER NA, REMARK 210 150MM SODIUM CHLORIDE, 1MM REMARK 210 EDTA, 1MM BMD; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, 2D TOCSY, 3D_13C- REMARK 210 SEPARATED_NOESY, 3D_15N- REMARK 210 SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 -47.09 -178.35 REMARK 500 1 SER A 5 -51.84 -121.17 REMARK 500 1 ASP A 26 33.94 -145.76 REMARK 500 1 PRO A 40 74.43 -61.29 REMARK 500 1 SER A 49 31.95 -166.52 REMARK 500 1 LYS A 53 -54.94 -170.32 REMARK 500 1 ASN A 65 -175.02 -177.44 REMARK 500 1 LEU A 79 -175.56 -60.28 REMARK 500 2 SER A 5 -43.33 -168.57 REMARK 500 2 PRO A 40 65.00 -65.11 REMARK 500 2 THR A 48 -46.45 -152.57 REMARK 500 2 SER A 49 32.85 -142.52 REMARK 500 2 ASN A 51 83.45 60.56 REMARK 500 2 ALA A 52 22.16 -143.92 REMARK 500 2 LYS A 53 -6.23 78.52 REMARK 500 2 ASN A 65 -175.00 -177.32 REMARK 500 2 LYS A 81 -63.98 -90.45 REMARK 500 3 SER A 3 75.70 -172.83 REMARK 500 3 SER A 5 -61.37 -122.74 REMARK 500 3 LYS A 6 173.53 59.78 REMARK 500 3 ASP A 26 41.22 -109.87 REMARK 500 3 PRO A 40 63.89 -67.77 REMARK 500 3 THR A 48 -44.80 -130.37 REMARK 500 3 SER A 49 32.42 -158.10 REMARK 500 3 LYS A 53 -36.65 85.77 REMARK 500 3 GLU A 62 99.92 -69.85 REMARK 500 3 ASN A 65 -177.88 -176.67 REMARK 500 4 PRO A 40 79.55 -66.34 REMARK 500 4 THR A 48 -79.42 -74.25 REMARK 500 4 ALA A 52 49.35 -91.70 REMARK 500 4 LYS A 53 -49.17 -162.46 REMARK 500 4 ASN A 65 -166.18 -169.15 REMARK 500 5 SER A 5 -75.48 -137.19 REMARK 500 5 LYS A 6 -166.23 -118.07 REMARK 500 5 PRO A 40 71.81 -64.00 REMARK 500 5 THR A 48 -50.00 -125.40 REMARK 500 5 SER A 49 37.34 -176.79 REMARK 500 5 ASN A 51 60.03 62.22 REMARK 500 5 LYS A 53 -6.13 78.04 REMARK 500 5 ASN A 65 -172.80 -175.82 REMARK 500 6 SER A 3 177.40 177.41 REMARK 500 6 PRO A 8 74.05 -63.14 REMARK 500 6 THR A 9 44.52 -142.42 REMARK 500 6 THR A 23 69.74 -118.21 REMARK 500 6 ASP A 26 39.99 -144.61 REMARK 500 6 PHE A 45 109.98 -59.72 REMARK 500 6 THR A 48 -46.63 -146.78 REMARK 500 6 LYS A 53 -48.40 80.11 REMARK 500 6 ASN A 65 -177.23 -176.74 REMARK 500 6 LEU A 79 -176.27 -61.93 REMARK 500 6 VAL A 83 -42.91 -130.90 REMARK 500 7 PRO A 40 75.10 -65.08 REMARK 500 7 PHE A 45 109.94 -59.76 REMARK 500 7 THR A 48 76.41 -100.88 REMARK 500 7 ASN A 51 79.05 59.70 REMARK 500 7 LYS A 53 -48.54 80.00 REMARK 500 7 LEU A 79 -179.13 -60.84 REMARK 500 8 PRO A 2 -73.33 -59.25 REMARK 500 8 SER A 3 117.64 61.52 REMARK 500 8 ASP A 26 45.00 -109.66 REMARK 500 8 PRO A 40 65.35 -67.88 REMARK 500 8 PHE A 45 109.91 -59.53 REMARK 500 8 THR A 48 -66.80 -101.10 REMARK 500 8 SER A 49 33.58 -166.73 REMARK 500 8 LYS A 53 -47.32 -170.69 REMARK 500 8 ASN A 65 -171.07 -174.48 REMARK 500 8 LEU A 79 -178.96 -59.58 REMARK 500 8 LYS A 81 -61.72 -102.05 REMARK 500 9 THR A 9 37.66 -179.32 REMARK 500 9 PRO A 40 75.97 -60.34 REMARK 500 9 THR A 48 82.40 -159.86 REMARK 500 9 ASN A 51 79.04 59.55 REMARK 500 9 LYS A 53 -8.28 79.82 REMARK 500 9 ASN A 65 -176.90 -171.41 REMARK 500 9 LEU A 79 -175.70 -63.27 REMARK 500 10 SER A 5 -78.52 64.63 REMARK 500 10 THR A 9 76.72 -107.66 REMARK 500 10 TYR A 12 89.10 -150.14 REMARK 500 10 ASP A 26 47.83 -162.09 REMARK 500 10 PRO A 40 62.28 -68.20 REMARK 500 10 THR A 48 -85.81 -131.15 REMARK 500 10 ASN A 51 90.94 -59.65 REMARK 500 10 ASN A 65 -176.90 -179.15 REMARK 500 10 LEU A 79 -179.69 -66.40 REMARK 500 11 ASP A 4 -178.83 60.23 REMARK 500 11 SER A 5 42.32 -177.00 REMARK 500 11 PRO A 40 72.61 -63.88 REMARK 500 11 ASN A 51 91.20 -55.81 REMARK 500 11 LEU A 79 -178.31 -57.42 REMARK 500 11 ASP A 80 52.21 -116.92 REMARK 500 11 LYS A 81 -58.29 -123.00 REMARK 500 12 PRO A 40 74.80 -62.36 REMARK 500 12 SER A 49 33.39 -161.45 REMARK 500 12 ASN A 51 92.19 59.87 REMARK 500 12 ALA A 52 26.36 -144.04 REMARK 500 12 LYS A 53 -5.62 78.46 REMARK 500 12 ASN A 65 -178.18 -173.88 REMARK 500 13 SER A 3 -69.50 -137.55 REMARK 500 13 SER A 5 76.35 61.55 REMARK 500 13 THR A 9 49.64 -90.21 REMARK 500 13 ASP A 26 49.56 -155.42 REMARK 500 13 PRO A 40 71.37 -63.08 REMARK 500 13 LYS A 53 -49.11 79.45 REMARK 500 13 LEU A 79 -177.75 -69.46 REMARK 500 14 SER A 5 -44.11 -165.32 REMARK 500 14 PRO A 8 -75.34 -94.46 REMARK 500 14 THR A 9 80.57 161.97 REMARK 500 14 TYR A 12 89.35 -150.10 REMARK 500 14 ASP A 26 47.92 -150.02 REMARK 500 14 PRO A 40 75.00 -61.80 REMARK 500 14 THR A 48 54.87 -160.41 REMARK 500 14 ASN A 51 69.06 60.26 REMARK 500 14 LYS A 53 -49.34 77.90 REMARK 500 14 ASN A 65 -175.35 -176.37 REMARK 500 15 SER A 5 -175.31 -173.59 REMARK 500 15 LYS A 6 134.02 63.86 REMARK 500 15 PHE A 45 109.92 -59.98 REMARK 500 15 SER A 49 34.57 -173.64 REMARK 500 15 ASN A 51 91.97 -68.81 REMARK 500 15 ALA A 52 51.27 -90.21 REMARK 500 15 LYS A 53 -50.40 -161.59 REMARK 500 15 ASN A 65 -169.00 -176.09 REMARK 500 15 LYS A 81 -61.39 -98.59 REMARK 500 16 PRO A 8 74.40 -61.76 REMARK 500 16 ASP A 26 48.64 -150.14 REMARK 500 16 PRO A 40 73.19 -65.27 REMARK 500 16 THR A 48 -79.99 -59.50 REMARK 500 16 SER A 49 30.86 -162.56 REMARK 500 16 LYS A 53 -47.28 -163.16 REMARK 500 16 ASN A 65 -176.07 -175.58 REMARK 500 16 LYS A 81 -61.48 -98.33 REMARK 500 17 LYS A 7 87.78 -155.45 REMARK 500 17 ASP A 26 31.75 -156.84 REMARK 500 17 PRO A 40 70.48 -63.04 REMARK 500 17 SER A 49 31.00 -161.40 REMARK 500 17 LYS A 53 -48.71 78.23 REMARK 500 17 ASN A 65 -177.21 -171.99 REMARK 500 17 VAL A 83 -48.07 -132.19 REMARK 500 18 SER A 5 136.75 -170.39 REMARK 500 18 THR A 23 70.01 -119.42 REMARK 500 18 PRO A 40 70.94 -64.65 REMARK 500 18 ASN A 51 90.01 61.26 REMARK 500 18 ALA A 52 23.18 -150.80 REMARK 500 18 LYS A 53 -9.29 77.51 REMARK 500 18 ASN A 65 -171.08 -177.05 REMARK 500 19 SER A 5 -72.84 -73.85 REMARK 500 19 LYS A 6 144.55 63.17 REMARK 500 19 ASP A 26 38.29 -155.72 REMARK 500 19 ASN A 51 91.47 -64.44 REMARK 500 19 LYS A 53 -54.45 -167.34 REMARK 500 19 ASN A 65 -176.57 -171.45 REMARK 500 20 SER A 3 105.69 -59.54 REMARK 500 20 ASP A 4 83.84 59.88 REMARK 500 20 ASP A 26 49.35 -162.79 REMARK 500 20 PRO A 40 74.80 -63.65 REMARK 500 20 THR A 48 -78.25 -111.42 REMARK 500 20 SER A 49 31.22 -152.34 REMARK 500 20 GLU A 62 99.87 -69.90 REMARK 500 20 ASN A 65 -172.51 -176.97 REMARK 500 20 LEU A 79 -176.75 -69.14 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2H9Z A 1 86 UNP O25237 Y495_HELPY 1 86
SEQRES 1 A 86 MET PRO SER ASP SER LYS LYS PRO THR ILE ILE TYR PRO SEQRES 2 A 86 CYS LEU TRP ASP TYR ARG VAL ILE MET THR THR LYS ASP SEQRES 3 A 86 THR SER THR LEU LYS GLU LEU LEU GLU THR TYR GLN ARG SEQRES 4 A 86 PRO PHE LYS LEU GLU PHE LYS ASN THR SER LYS ASN ALA SEQRES 5 A 86 LYS PHE TYR SER PHE ASN VAL SER MET GLU VAL SER ASN SEQRES 6 A 86 GLU SER GLU ARG ASN GLU ILE PHE GLN LYS ILE SER GLN SEQRES 7 A 86 LEU ASP LYS VAL VAL GLN THR LEU
HELIX 1 1 THR A 27 LEU A 34 1 8 HELIX 2 2 ASN A 65 SER A 77 1 13
SHEET 1 A 4 PHE A 41 LYS A 42 0 SHEET 2 A 4 TYR A 55 GLU A 62 -1 O SER A 60 N LYS A 42 SHEET 3 A 4 LEU A 15 MET A 22 -1 N MET A 22 O TYR A 55 SHEET 4 A 4 VAL A 82 THR A 85 -1 O GLN A 84 N ILE A 21
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000