10 20 30 40 50 60 70 80 2H3F - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRAL PROTEIN 22-MAY-06 2H3F
TITLE SOLUTION STRUCTURE OF THE HIV-1 MA PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GAG POLYPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 2-132; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS HIV-1 UNMYRISTOYLATED MA PROTEIN, VIRAL PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR J.S.SAAD,J.MILLER,J.TAI,A.KIM,R.H.GHANAM,M.F.SUMMERS
REVDAT 2 24-FEB-09 2H3F 1 VERSN REVDAT 1 25-JUL-06 2H3F 0
JRNL AUTH J.S.SAAD,J.MILLER,J.TAI,A.KIM,R.H.GHANAM, JRNL AUTH 2 M.F.SUMMERS JRNL TITL STRUCTURAL BASIS FOR TARGETING HIV-1 GAG PROTEINS JRNL TITL 2 TO THE PLASMA MEMBRANE FOR VIRUS ASSEMBLY. JRNL REF PROC.NATL.ACAD.SCI.USA V. 103 11364 2006 JRNL REFN ISSN 0027-8424 JRNL PMID 16840558 JRNL DOI 10.1073/PNAS.0602818103
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : P.GUNTERT ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2H3F COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB037880.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 50MM PHOSPHATE BUFFER, 5MM REMARK 210 DTT, 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : DMX, DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 3 45.88 -159.14 REMARK 500 1 ALA A 5 126.81 -178.30 REMARK 500 1 SER A 6 154.19 -47.52 REMARK 500 1 SER A 72 176.85 -55.35 REMARK 500 1 GLN A 130 40.51 -166.51 REMARK 500 2 SER A 6 136.86 -170.21 REMARK 500 2 VAL A 7 -66.93 -134.29 REMARK 500 2 GLU A 52 32.10 -99.20 REMARK 500 2 THR A 53 112.91 -168.96 REMARK 500 2 SER A 72 171.63 -53.32 REMARK 500 2 ASP A 96 178.89 179.60 REMARK 500 2 LYS A 114 31.95 -98.76 REMARK 500 2 ALA A 115 31.81 -161.61 REMARK 500 2 ALA A 120 -58.82 -149.70 REMARK 500 2 THR A 122 -170.81 51.41 REMARK 500 3 ASP A 96 179.61 179.46 REMARK 500 3 ALA A 119 55.36 -98.18 REMARK 500 3 ALA A 120 31.07 -158.22 REMARK 500 3 GLN A 130 124.96 -173.66 REMARK 500 4 LYS A 18 -70.50 -71.60 REMARK 500 4 SER A 72 179.67 -57.00 REMARK 500 4 SER A 111 33.12 -96.97 REMARK 500 4 SER A 126 39.37 -152.03 REMARK 500 5 ALA A 5 41.03 -175.57 REMARK 500 5 SER A 6 156.94 -45.53 REMARK 500 5 LYS A 18 -72.64 -72.30 REMARK 500 5 GLU A 52 31.16 -96.54 REMARK 500 5 SER A 72 170.98 -58.94 REMARK 500 5 ASP A 96 -178.97 177.51 REMARK 500 5 ALA A 119 61.72 -102.03 REMARK 500 5 ALA A 120 26.85 -159.48 REMARK 500 5 ASP A 121 50.80 -112.95 REMARK 500 5 GLN A 127 34.82 -173.01 REMARK 500 6 VAL A 7 -63.93 -102.27 REMARK 500 6 SER A 72 177.42 -55.81 REMARK 500 6 ASP A 96 -179.91 179.24 REMARK 500 6 ALA A 119 -46.05 -146.56 REMARK 500 7 ILE A 19 134.73 -36.12 REMARK 500 7 LYS A 27 122.15 -26.85 REMARK 500 7 GLU A 52 32.96 -96.85 REMARK 500 7 THR A 53 111.76 -166.68 REMARK 500 7 SER A 72 173.69 -56.09 REMARK 500 7 ASP A 96 -179.12 178.82 REMARK 500 7 ALA A 119 -168.14 -100.79 REMARK 500 7 ASN A 125 49.37 -173.77 REMARK 500 7 SER A 126 119.74 -164.96 REMARK 500 7 ASN A 131 -67.66 -127.14 REMARK 500 8 SER A 6 -74.54 -159.83 REMARK 500 8 LYS A 18 -70.44 -71.23 REMARK 500 8 SER A 72 -173.87 -59.32 REMARK 500 8 ARG A 91 2.04 80.58 REMARK 500 8 VAL A 94 147.25 -38.42 REMARK 500 8 LYS A 114 33.13 -99.08 REMARK 500 8 ALA A 115 26.70 -148.42 REMARK 500 8 ALA A 119 -60.26 -134.36 REMARK 500 8 SER A 126 -73.26 -119.72 REMARK 500 8 SER A 129 51.85 -148.30 REMARK 500 9 VAL A 7 -67.46 -127.00 REMARK 500 9 ILE A 19 142.89 -39.52 REMARK 500 9 GLU A 52 32.37 -98.36 REMARK 500 9 THR A 53 110.20 -164.58 REMARK 500 9 SER A 72 170.51 -53.34 REMARK 500 9 GLN A 90 31.24 -89.06 REMARK 500 9 GLN A 116 33.02 -168.04 REMARK 500 9 ALA A 119 50.52 -92.05 REMARK 500 9 ALA A 120 -82.47 -140.02 REMARK 500 10 ALA A 5 42.03 -95.39 REMARK 500 10 LYS A 18 -71.09 -71.74 REMARK 500 10 SER A 72 173.83 -59.23 REMARK 500 10 ASP A 96 177.70 179.37 REMARK 500 10 ALA A 120 54.68 -159.17 REMARK 500 10 ASP A 121 34.65 -164.16 REMARK 500 10 SER A 129 118.06 -163.41 REMARK 500 11 SER A 6 84.91 -167.90 REMARK 500 11 LYS A 18 -70.81 -71.49 REMARK 500 11 ASP A 96 -177.83 176.64 REMARK 500 11 ASN A 125 50.33 -151.68 REMARK 500 12 ALA A 3 -65.62 -105.91 REMARK 500 12 SER A 6 101.92 -177.61 REMARK 500 12 VAL A 7 -60.68 -101.83 REMARK 500 12 LYS A 18 -71.45 -72.02 REMARK 500 12 GLN A 90 31.24 -91.48 REMARK 500 12 ALA A 120 -59.61 -159.75 REMARK 500 13 ALA A 3 121.11 -175.35 REMARK 500 13 LYS A 18 -70.09 -71.19 REMARK 500 13 GLN A 90 31.01 -91.87 REMARK 500 13 LYS A 114 32.50 -96.36 REMARK 500 13 ALA A 115 34.76 -151.65 REMARK 500 13 ALA A 120 -40.40 -165.23 REMARK 500 13 VAL A 128 37.51 -143.25 REMARK 500 13 ASN A 131 81.10 -150.68 REMARK 500 14 LYS A 18 -70.82 -71.79 REMARK 500 14 ASP A 96 -178.80 176.98 REMARK 500 14 ALA A 115 39.73 -170.65 REMARK 500 14 ALA A 119 55.22 -105.38 REMARK 500 14 ALA A 120 33.77 -174.35 REMARK 500 15 ALA A 3 -41.78 -141.79 REMARK 500 15 ARG A 4 82.63 63.61 REMARK 500 15 LYS A 18 -71.22 -71.42 REMARK 500 15 GLN A 90 30.84 -91.49 REMARK 500 15 LYS A 114 33.11 -152.79 REMARK 500 15 ALA A 119 35.06 -150.82 REMARK 500 15 ASN A 124 79.17 -169.94 REMARK 500 15 ASN A 131 47.75 -145.08 REMARK 500 16 VAL A 7 -53.48 -125.08 REMARK 500 16 LYS A 18 -70.49 -71.56 REMARK 500 16 SER A 72 -177.15 -57.45 REMARK 500 16 VAL A 94 150.24 -39.22 REMARK 500 16 ALA A 120 40.41 -168.71 REMARK 500 16 ASN A 125 90.26 63.13 REMARK 500 16 GLN A 127 108.94 -56.97 REMARK 500 16 SER A 129 -173.88 -66.90 REMARK 500 16 ASN A 131 107.22 -178.87 REMARK 500 17 ALA A 3 -61.83 -121.09 REMARK 500 17 SER A 6 91.69 179.88 REMARK 500 17 LYS A 18 -70.69 -70.99 REMARK 500 17 SER A 72 172.38 -53.32 REMARK 500 17 ASP A 96 -175.66 174.72 REMARK 500 17 ALA A 118 -40.69 -174.34 REMARK 500 17 ASN A 125 138.07 -173.35 REMARK 500 18 SER A 6 178.04 63.58 REMARK 500 18 LYS A 18 -71.38 -71.42 REMARK 500 18 SER A 72 176.32 -59.41 REMARK 500 18 ARG A 91 4.29 80.40 REMARK 500 18 VAL A 94 143.97 -36.44 REMARK 500 18 LYS A 114 32.44 -96.51 REMARK 500 18 ALA A 115 26.86 -145.47 REMARK 500 18 GLN A 116 61.08 -169.71 REMARK 500 18 ALA A 119 32.32 -150.72 REMARK 500 18 ALA A 120 33.64 -155.21 REMARK 500 19 LYS A 18 -73.46 -71.90 REMARK 500 19 ILE A 19 146.10 -39.80 REMARK 500 19 SER A 72 171.73 -58.90 REMARK 500 19 ASP A 96 -177.38 176.92 REMARK 500 19 ASP A 121 -75.83 69.30 REMARK 500 19 THR A 122 -170.89 51.34 REMARK 500 19 SER A 126 138.72 -171.56 REMARK 500 20 LYS A 18 -70.45 -71.50 REMARK 500 20 SER A 72 170.79 -57.64 REMARK 500 20 ASP A 96 179.29 178.17 REMARK 500 20 GLN A 116 30.28 -164.18 REMARK 500 20 ASP A 121 -75.89 69.31 REMARK 500 20 THR A 122 163.53 64.32 REMARK 500 20 SER A 126 -175.20 -65.35 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2H3F A 2 132 UNP P12497 POL_HV1N5 1 131
SEQRES 1 A 131 GLY ALA ARG ALA SER VAL LEU SER GLY GLY GLU LEU ASP SEQRES 2 A 131 LYS TRP GLU LYS ILE ARG LEU ARG PRO GLY GLY LYS LYS SEQRES 3 A 131 GLN TYR LYS LEU LYS HIS ILE VAL TRP ALA SER ARG GLU SEQRES 4 A 131 LEU GLU ARG PHE ALA VAL ASN PRO GLY LEU LEU GLU THR SEQRES 5 A 131 SER GLU GLY CYS ARG GLN ILE LEU GLY GLN LEU GLN PRO SEQRES 6 A 131 SER LEU GLN THR GLY SER GLU GLU LEU ARG SER LEU TYR SEQRES 7 A 131 ASN THR ILE ALA VAL LEU TYR CYS VAL HIS GLN ARG ILE SEQRES 8 A 131 ASP VAL LYS ASP THR LYS GLU ALA LEU ASP LYS ILE GLU SEQRES 9 A 131 GLU GLU GLN ASN LYS SER LYS LYS LYS ALA GLN GLN ALA SEQRES 10 A 131 ALA ALA ASP THR GLY ASN ASN SER GLN VAL SER GLN ASN SEQRES 11 A 131 TYR
HELIX 1 1 SER A 9 GLU A 17 1 9 HELIX 2 2 LYS A 30 GLU A 42 1 13 HELIX 3 3 ARG A 43 ALA A 45 5 3 HELIX 4 4 THR A 53 GLN A 65 1 13 HELIX 5 5 PRO A 66 GLY A 71 5 6 HELIX 6 6 SER A 72 GLN A 90 1 19 HELIX 7 7 ASP A 96 LYS A 113 1 18 HELIX 8 8 LYS A 114 GLN A 116 5 3
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000