10 20 30 40 50 60 70 80 2GYI - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE)01-SEP-94 2GYI
TITLE DESIGN, SYNTHESIS, AND CHARACTERIZATION OF A POTENT XYLOSE ISOMERASE TITLE 2 INHIBITOR, D-THREONOHYDROXAMIC ACID, AND HIGH-RESOLUTION X-RAY TITLE 3 CRYSTALLOGRAPHIC STRUCTURE OF THE ENZYME-INHIBITOR COMPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: XYLOSE ISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.3.1.5; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES OLIVOCHROMOGENES; SOURCE 3 ORGANISM_TAXID: 1963
KEYWDS ISOMERASE(INTRAMOLECULAR OXIDOREDUCTASE)
EXPDTA X-RAY DIFFRACTION
AUTHOR K.N.ALLEN,A.LAVIE,G.A.PETSKO,D.RINGE
REVDAT 4 16-NOV-11 2GYI 1 HETATM REVDAT 3 13-JUL-11 2GYI 1 VERSN REVDAT 2 24-FEB-09 2GYI 1 VERSN REVDAT 1 10-JUL-95 2GYI 0
SPRSDE 10-JUL-95 2GYI 1GYI
JRNL AUTH K.N.ALLEN,A.LAVIE,G.A.PETSKO,D.RINGE JRNL TITL DESIGN, SYNTHESIS, AND CHARACTERIZATION OF A POTENT XYLOSE JRNL TITL 2 ISOMERASE INHIBITOR, D-THREONOHYDROXAMIC ACID, AND JRNL TITL 3 HIGH-RESOLUTION X-RAY CRYSTALLOGRAPHIC STRUCTURE OF THE JRNL TITL 4 ENZYME-INHIBITOR COMPLEX JRNL REF BIOCHEMISTRY V. 34 3742 1995 JRNL REFN ISSN 0006-2960 JRNL PMID 7893671 JRNL DOI 10.1021/BI00011A032
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.N.ALLEN,A.LAVIE,G.K.FARBER,A.GLASFELD,G.A.PETSKO,D.RINGE REMARK 1 TITL ISOTOPIC EXCHANGE PLUS SUBSTRATE AND INHIBITION KINETICS OF REMARK 1 TITL 2 D-XYLOSE ISOMERASE DO NOT SUPPORT A PROTON-TRANSFER REMARK 1 TITL 3 MECHANISM REMARK 1 REF BIOCHEMISTRY V. 33 1481 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.N.ALLEN,A.LAVIE,A.GLASFELD,T.N.TANADA,D.P.GERRITY, REMARK 1 AUTH 2 S.C.CARLSON,G.K.FARBER,G.A.PETSKO,D.RINGE REMARK 1 TITL ROLE OF THE DIVALENT METAL ION IN SUGAR BINDING, RING REMARK 1 TITL 2 OPENING, AND ISOMERIZATION BY D-XYLOSE ISOMERASE: REMARK 1 TITL 3 REPLACEMENT OF A CATALYTIC METAL BY AN AMINO ACID REMARK 1 REF BIOCHEMISTRY V. 33 1488 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH A.LAVIE,K.N.ALLEN,G.A.PETSKO,D.RINGE REMARK 1 TITL X-RAY CRYSTALLOGRAPHIC STRUCTURES OF D-XYLOSE REMARK 1 TITL 2 ISOMERASE-SUBSTRATE COMPLEXES POSITION THE SUBSTRATE AND REMARK 1 TITL 3 PROVIDE EVIDENCE FOR METAL MOVEMENT DURING CATALYSIS REMARK 1 REF BIOCHEMISTRY V. 33 5469 1994 REMARK 1 REFN ISSN 0006-2960
REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 83228 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6036 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 634 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 3.00 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.30 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2GYI COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.45000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.52500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.45000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.52500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: MTRIX REMARK 300 THE TRANSFORMATIONS PRESENTED ON MTRIX RECORDS BELOW REMARK 300 DESCRIBE NON-CRYSTALLOGRAPHIC RELATIONSHIPS AMONG THE REMARK 300 VARIOUS DOMAINS IN THIS ENTRY. APPLYING THE APPROPRIATE REMARK 300 MTRIX TRANSFORMATION TO THE RESIDUES LISTED FIRST WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR THE RESIDUES LISTED REMARK 300 SECOND. REMARK 300 REMARK 300 APPLIED TO TRANSFORMED TO REMARK 300 MTRIX RESIDUES RESIDUES RMSD REMARK 300 M1 A 2 .. A 386 B 2 .. B 386 1.200
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 33080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -185.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1633 LIES ON A SPECIAL POSITION.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 SER B 1
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 63 N ASP A 64 1.71 REMARK 500 OG SER A 69 NH2 ARG A 73 1.81 REMARK 500 NH1 ARG B 176 O HOH B 1624 1.88 REMARK 500 O HOH B 1279 O HOH B 1539 1.93 REMARK 500 ND1 HIS B 48 O HOH B 1622 2.00 REMARK 500 O TRP A 299 O HOH A 1586 2.09 REMARK 500 OD1 ASP B 358 O HOH B 1432 2.12 REMARK 500 O SER B 62 O HOH B 1428 2.17 REMARK 500 O THR A 84 O HOH A 1620 2.17 REMARK 500 O HOH B 1617 O HOH B 1618 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 48 NE2 HIS A 48 CD2 -0.071 REMARK 500 HIS A 53 NE2 HIS A 53 CD2 -0.079 REMARK 500 SER A 63 C ASP A 64 N -0.439 REMARK 500 HIS A 95 NE2 HIS A 95 CD2 -0.072 REMARK 500 LYS A 131 C THR A 132 N 0.177 REMARK 500 ASP A 149 C VAL A 150 N -0.213 REMARK 500 HIS A 197 NE2 HIS A 197 CD2 -0.071 REMARK 500 HIS A 284 NE2 HIS A 284 CD2 -0.069 REMARK 500 HIS A 381 NE2 HIS A 381 CD2 -0.069 REMARK 500 HIS B 48 NE2 HIS B 48 CD2 -0.070 REMARK 500 HIS B 53 NE2 HIS B 53 CD2 -0.080 REMARK 500 GLU B 66 CB GLU B 66 CG 0.179 REMARK 500 GLU B 66 CG GLU B 66 CD 0.171 REMARK 500 HIS B 70 NE2 HIS B 70 CD2 -0.071 REMARK 500 HIS B 95 NE2 HIS B 95 CD2 -0.081 REMARK 500 HIS B 229 NE2 HIS B 229 CD2 -0.069 REMARK 500 HIS B 242 NE2 HIS B 242 CD2 -0.067 REMARK 500 HIS B 381 NE2 HIS B 381 CD2 -0.070 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 9 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 TRP A 15 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP A 15 CB - CG - CD1 ANGL. DEV. = -8.0 DEGREES REMARK 500 TRP A 15 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 TRP A 15 CG - CD2 - CE3 ANGL. DEV. = 6.1 DEGREES REMARK 500 TRP A 19 CD1 - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG A 41 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 SER A 63 O - C - N ANGL. DEV. = -16.9 DEGREES REMARK 500 ASP A 64 C - N - CA ANGL. DEV. = 39.9 DEGREES REMARK 500 ARG A 73 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 75 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG A 112 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 LYS A 131 O - C - N ANGL. DEV. = -13.3 DEGREES REMARK 500 TRP A 136 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP A 136 CE2 - CD2 - CG ANGL. DEV. = -5.4 DEGREES REMARK 500 LEU A 163 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 ARG A 204 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 TYR A 211 CB - CG - CD1 ANGL. DEV. = -3.8 DEGREES REMARK 500 MET A 222 CA - CB - CG ANGL. DEV. = -11.6 DEGREES REMARK 500 TRP A 236 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP A 236 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG A 265 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 265 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 TRP A 269 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP A 269 CB - CG - CD1 ANGL. DEV. = -7.9 DEGREES REMARK 500 TRP A 269 CG - CD1 - NE1 ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP A 269 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 TRP A 299 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP A 299 CB - CG - CD1 ANGL. DEV. = -8.1 DEGREES REMARK 500 TRP A 299 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG A 330 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 LEU A 334 CA - CB - CG ANGL. DEV. = -16.5 DEGREES REMARK 500 ASP A 344 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG A 353 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 367 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 367 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 373 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 MET A 379 CG - SD - CE ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG A 386 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 TRP B 15 CD1 - CG - CD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 TRP B 15 CE2 - CD2 - CG ANGL. DEV. = -5.9 DEGREES REMARK 500 TRP B 19 CE2 - CD2 - CG ANGL. DEV. = -4.9 DEGREES REMARK 500 ARG B 22 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 73 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG B 111 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 116 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 116 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 TRP B 136 CD1 - CG - CD2 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG B 151 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG B 156 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 64 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 16 -72.10 -80.14 REMARK 500 ASP A 23 -161.97 -119.25 REMARK 500 SER A 63 133.10 79.76 REMARK 500 PHE A 93 -25.82 -147.43 REMARK 500 GLU A 185 111.21 66.08 REMARK 500 ASN A 246 -160.47 -175.14 REMARK 500 LYS A 252 -170.35 -175.77 REMARK 500 ALA A 342 63.18 -159.03 REMARK 500 ASP A 344 4.42 155.87 REMARK 500 PHE A 356 -71.66 -143.74 REMARK 500 THR B 16 -75.03 -87.16 REMARK 500 PHE B 60 131.34 -37.07 REMARK 500 PHE B 98 31.38 -96.47 REMARK 500 GLU B 185 101.80 79.98 REMARK 500 ASN B 246 -165.31 -163.87 REMARK 500 LYS B 252 -171.69 -170.42 REMARK 500 ARG B 291 -6.66 -56.86 REMARK 500 ALA B 342 64.54 -159.09 REMARK 500 ASP B 344 -60.00 138.41 REMARK 500 PHE B 356 -65.49 -155.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 63 ASP A 64 -112.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 22 0.14 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS A 131 -13.31 REMARK 500 ALA A 364 -14.79 REMARK 500 SER B 63 -11.82 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1010 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH A1245 DISTANCE = 5.57 ANGSTROMS REMARK 525 HOH A1515 DISTANCE = 5.35 ANGSTROMS REMARK 525 HOH A1524 DISTANCE = 8.67 ANGSTROMS REMARK 525 HOH B1230 DISTANCE = 5.43 ANGSTROMS REMARK 525 HOH B1325 DISTANCE = 7.58 ANGSTROMS REMARK 525 HOH B1329 DISTANCE = 5.74 ANGSTROMS REMARK 525 HOH B1403 DISTANCE = 5.36 ANGSTROMS REMARK 525 HOH B1423 DISTANCE = 5.67 ANGSTROMS REMARK 525 HOH B1431 DISTANCE = 5.53 ANGSTROMS REMARK 525 HOH B1469 DISTANCE = 5.23 ANGSTROMS REMARK 525 HOH B1611 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B1623 DISTANCE = 5.22 ANGSTROMS
REMARK 600 REMARK 600 HETEROGEN REMARK 600 THERE IS ONE D-THREONOHYDROXAMIC ACID MOLECULE BOUND IN THE REMARK 600 LINEAR FORM IN THE ACTIVE SITE OF EACH MONOMER. IT IS REMARK 600 LABELED HYA A 960 IN MONOMER 1 AND HYA B 970 IN MONOMER 2. REMARK 600 REMARK 600 THERE ARE TWO WATER MOLECULES IN THE ACTIVE SITE OF EACH REMARK 600 MONOMER MAKING A LIGAND TO MAGNESIUM, NUMBERED HOH 1700 AND REMARK 600 1701 IN MONOMER 1 AND HOH 1800 AND 1801 IN MONOMER 2.
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 400 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 180 OE2 REMARK 620 2 GLU A 216 OE1 93.0 REMARK 620 3 HYA A 960 O1 70.8 79.4 REMARK 620 4 HYA A 960 O3 72.2 156.1 78.0 REMARK 620 5 ASP A 244 OD2 84.6 107.3 154.9 90.3 REMARK 620 6 ASP A 286 OD2 153.4 105.0 93.2 84.0 107.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 216 OE2 REMARK 620 2 HOH A1701 O 82.6 REMARK 620 3 HIS A 219 NE2 75.7 81.7 REMARK 620 4 GLU A 216 OE1 41.1 123.3 78.7 REMARK 620 5 HOH A1700 O 107.4 117.6 160.5 91.2 REMARK 620 6 HYA A 960 N 151.2 122.8 93.3 111.1 74.6 REMARK 620 7 HYA A 960 O1 104.9 162.6 84.9 64.2 75.7 46.9 REMARK 620 8 HYA A 960 O 153.2 100.5 78.4 126.2 94.8 25.0 65.8 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 400 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 216 OE1 REMARK 620 2 ASP B 244 OD2 78.3 REMARK 620 3 GLU B 180 OE1 127.0 82.5 REMARK 620 4 ASP B 286 OD2 77.3 84.7 148.9 REMARK 620 5 HYA B 970 O1 108.5 171.3 89.0 101.9 REMARK 620 6 HYA B 970 O3 174.1 100.1 57.9 96.9 73.7 REMARK 620 7 GLU B 180 OE2 83.2 91.6 48.3 160.6 83.9 102.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 219 NE2 REMARK 620 2 HOH B1801 O 100.5 REMARK 620 3 HYA B 970 N 124.2 97.9 REMARK 620 4 HYA B 970 O1 95.8 147.9 50.4 REMARK 620 5 HYA B 970 O 102.9 83.2 29.1 66.2 REMARK 620 6 HOH B1800 O 168.4 70.2 65.4 95.7 83.4 REMARK 620 7 GLU B 216 OE2 87.0 87.0 146.3 121.6 167.1 85.5 REMARK 620 N 1 2 3 4 5 6
REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEETS PRESENTED AS *S1* AND *S2* ON SHEET RECORDS REMARK 700 BELOW ARE ACTUALLY EIGHT-STRANDED BETA-BARRELS. THIS IS REMARK 700 REPRESENTED BY NINE-STRANDED SHEETS IN WHICH THE FIRST AND REMARK 700 LAST STRANDS OF EACH ARE IDENTICAL.
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: M1A REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: METAL BINDING SITE 1 IN MONOMER A ACTIVE SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: M2A REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: METAL BINDING SITE 2 IN MONOMER A ACTIVE SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: M1B REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: METAL BINDING SITE 1 IN MONOMER B ACTIVE SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: M2B REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: METAL BINDING SITE 2 IN MONOMER B ACTIVE SITE REMARK 800 REMARK 800 SITE_IDENTIFIER: HYA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: INHIBITOR, D-THREONOHYDROXAMIC ACID BINDING SITE REMARK 800 IN MONOMER A REMARK 800 REMARK 800 SITE_IDENTIFIER: HYB REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: INHIBITOR, D-THREONOHYDROXAMIC ACID BINDING SITE REMARK 800 IN MONOMER B REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HYA A 960 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HYA B 970
DBREF 2GYI A 1 386 UNP P15587 XYLA_STROL 1 386 DBREF 2GYI B 1 386 UNP P15587 XYLA_STROL 1 386
SEQRES 1 A 386 SER TYR GLN PRO THR PRO GLU ASP ARG PHE THR PHE GLY SEQRES 2 A 386 LEU TRP THR VAL GLY TRP GLN GLY ARG ASP PRO PHE GLY SEQRES 3 A 386 ASP ALA THR ARG PRO ALA LEU ASP PRO VAL GLU THR VAL SEQRES 4 A 386 GLN ARG LEU ALA GLU LEU GLY ALA HIS GLY VAL THR PHE SEQRES 5 A 386 HIS ASP ASP ASP LEU ILE PRO PHE GLY SER SER ASP THR SEQRES 6 A 386 GLU ARG GLU SER HIS ILE LYS ARG PHE ARG GLN ALA LEU SEQRES 7 A 386 ASP ALA THR GLY MET THR VAL PRO MET ALA THR THR ASN SEQRES 8 A 386 LEU PHE THR HIS PRO VAL PHE LYS ASP GLY GLY PHE THR SEQRES 9 A 386 ALA ASN ASP ARG ASP VAL ARG ARG TYR ALA LEU ARG LYS SEQRES 10 A 386 THR ILE ARG ASN ILE ASP LEU ALA VAL GLU LEU GLY ALA SEQRES 11 A 386 LYS THR TYR VAL ALA TRP GLY GLY ARG GLU GLY ALA GLU SEQRES 12 A 386 SER GLY ALA ALA LYS ASP VAL ARG VAL ALA LEU ASP ARG SEQRES 13 A 386 MET LYS GLU ALA PHE ASP LEU LEU GLY GLU TYR VAL THR SEQRES 14 A 386 SER GLN GLY TYR ASP THR ARG PHE ALA ILE GLU PRO LYS SEQRES 15 A 386 PRO ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR VAL SEQRES 16 A 386 GLY HIS ALA LEU ALA PHE ILE GLU ARG LEU GLU ARG PRO SEQRES 17 A 386 GLU LEU TYR GLY VAL ASN PRO GLU VAL GLY HIS GLU GLN SEQRES 18 A 386 MET ALA GLY LEU ASN PHE PRO HIS GLY ILE ALA GLN ALA SEQRES 19 A 386 LEU TRP ALA GLY LYS LEU PHE HIS ILE ASP LEU ASN GLY SEQRES 20 A 386 GLN SER GLY ILE LYS TYR ASP GLN ASP LEU ARG PHE GLY SEQRES 21 A 386 ALA GLY ASP LEU ARG ALA ALA PHE TRP LEU VAL ASP LEU SEQRES 22 A 386 LEU GLU SER ALA GLY TYR GLU GLY PRO ARG HIS PHE ASP SEQRES 23 A 386 PHE LYS PRO PRO ARG THR GLU ASP ILE ASP GLY VAL TRP SEQRES 24 A 386 ALA SER ALA ALA GLY CYS MET ARG ASN TYR LEU ILE LEU SEQRES 25 A 386 LYS GLU ARG ALA ALA ALA PHE ARG ALA ASP PRO GLU VAL SEQRES 26 A 386 GLN GLU ALA LEU ARG ALA SER ARG LEU ASP GLU LEU ALA SEQRES 27 A 386 GLN PRO THR ALA ALA ASP GLY VAL GLN GLU LEU LEU ALA SEQRES 28 A 386 ASP ARG THR ALA PHE GLU ASP PHE ASP VAL ASP ALA ALA SEQRES 29 A 386 ALA ALA ARG GLY MET ALA PHE GLU ARG LEU ASP GLN LEU SEQRES 30 A 386 ALA MET ASP HIS LEU LEU GLY ALA ARG SEQRES 1 B 386 SER TYR GLN PRO THR PRO GLU ASP ARG PHE THR PHE GLY SEQRES 2 B 386 LEU TRP THR VAL GLY TRP GLN GLY ARG ASP PRO PHE GLY SEQRES 3 B 386 ASP ALA THR ARG PRO ALA LEU ASP PRO VAL GLU THR VAL SEQRES 4 B 386 GLN ARG LEU ALA GLU LEU GLY ALA HIS GLY VAL THR PHE SEQRES 5 B 386 HIS ASP ASP ASP LEU ILE PRO PHE GLY SER SER ASP THR SEQRES 6 B 386 GLU ARG GLU SER HIS ILE LYS ARG PHE ARG GLN ALA LEU SEQRES 7 B 386 ASP ALA THR GLY MET THR VAL PRO MET ALA THR THR ASN SEQRES 8 B 386 LEU PHE THR HIS PRO VAL PHE LYS ASP GLY GLY PHE THR SEQRES 9 B 386 ALA ASN ASP ARG ASP VAL ARG ARG TYR ALA LEU ARG LYS SEQRES 10 B 386 THR ILE ARG ASN ILE ASP LEU ALA VAL GLU LEU GLY ALA SEQRES 11 B 386 LYS THR TYR VAL ALA TRP GLY GLY ARG GLU GLY ALA GLU SEQRES 12 B 386 SER GLY ALA ALA LYS ASP VAL ARG VAL ALA LEU ASP ARG SEQRES 13 B 386 MET LYS GLU ALA PHE ASP LEU LEU GLY GLU TYR VAL THR SEQRES 14 B 386 SER GLN GLY TYR ASP THR ARG PHE ALA ILE GLU PRO LYS SEQRES 15 B 386 PRO ASN GLU PRO ARG GLY ASP ILE LEU LEU PRO THR VAL SEQRES 16 B 386 GLY HIS ALA LEU ALA PHE ILE GLU ARG LEU GLU ARG PRO SEQRES 17 B 386 GLU LEU TYR GLY VAL ASN PRO GLU VAL GLY HIS GLU GLN SEQRES 18 B 386 MET ALA GLY LEU ASN PHE PRO HIS GLY ILE ALA GLN ALA SEQRES 19 B 386 LEU TRP ALA GLY LYS LEU PHE HIS ILE ASP LEU ASN GLY SEQRES 20 B 386 GLN SER GLY ILE LYS TYR ASP GLN ASP LEU ARG PHE GLY SEQRES 21 B 386 ALA GLY ASP LEU ARG ALA ALA PHE TRP LEU VAL ASP LEU SEQRES 22 B 386 LEU GLU SER ALA GLY TYR GLU GLY PRO ARG HIS PHE ASP SEQRES 23 B 386 PHE LYS PRO PRO ARG THR GLU ASP ILE ASP GLY VAL TRP SEQRES 24 B 386 ALA SER ALA ALA GLY CYS MET ARG ASN TYR LEU ILE LEU SEQRES 25 B 386 LYS GLU ARG ALA ALA ALA PHE ARG ALA ASP PRO GLU VAL SEQRES 26 B 386 GLN GLU ALA LEU ARG ALA SER ARG LEU ASP GLU LEU ALA SEQRES 27 B 386 GLN PRO THR ALA ALA ASP GLY VAL GLN GLU LEU LEU ALA SEQRES 28 B 386 ASP ARG THR ALA PHE GLU ASP PHE ASP VAL ASP ALA ALA SEQRES 29 B 386 ALA ALA ARG GLY MET ALA PHE GLU ARG LEU ASP GLN LEU SEQRES 30 B 386 ALA MET ASP HIS LEU LEU GLY ALA ARG
HET MG A 400 1 HET MG A 401 1 HET MG B 400 1 HET MG B 401 1 HET HYA A 960 10 HET HYA B 970 10
HETNAM MG MAGNESIUM ION HETNAM HYA 2,3,4,N-TETRAHYDROXY-BUTYRIMIDIC ACID
FORMUL 3 MG 4(MG 2+) FORMUL 7 HYA 2(C4 H9 N O5) FORMUL 9 HOH *634(H2 O)
HELIX 1 H1 LEU A 14 TRP A 19 1IN ALPHA/BETA BARREL 6 HELIX 2 H2 PRO A 35 LEU A 45 1IN ALPHA/BETA BARREL 11 HELIX 3 H3 ASP A 64 THR A 81 1IN ALPHA/BETA BARREL 18 HELIX 4 H4 ARG A 108 LEU A 128 1IN ALPHA/BETA BARREL 21 HELIX 5 H5 VAL A 150 GLN A 171 1IN ALPHA/BETA BARREL 22 HELIX 6 H6 VAL A 195 ARG A 204 1IN ALPHA/BETA BARREL 10 HELIX 7 H7 VAL A 217 ALA A 223 1IN ALPHA/BETA BARREL 7 HELIX 8 H8 PHE A 227 ALA A 237 1IN ALPHA/BETA BARREL 11 HELIX 9 H9 ARG A 265 SER A 276 1IN ALPHA/BETA BARREL 12 HELIX 10 H10 ILE A 295 ALA A 321 1IN ALPHA/BETA BARREL 27 HELIX 11 H11 GLU A 324 ALA A 331 1IN ALPHA/BETA BARREL 8 HELIX 12 H12 LEU A 334 ALA A 338 1IN C-TERMINAL DOMAIN 5 HELIX 13 H13 VAL A 346 ASP A 352 1IN C-TERMINAL DOMAIN 7 HELIX 14 H14 VAL A 361 ALA A 366 1IN C-TERMINAL DOMAIN 6 HELIX 15 H15 PHE A 371 LEU A 382 1IN C-TERMINAL DOMAIN 12 HELIX 16 H16 LEU B 14 TRP B 19 1IN ALPHA/BETA BARREL 6 HELIX 17 H17 PRO B 35 LEU B 45 1IN ALPHA/BETA BARREL 11 HELIX 18 H18 ASP B 64 THR B 81 1IN ALPHA/BETA BARREL 18 HELIX 19 H19 ARG B 108 LEU B 128 1IN ALPHA/BETA BARREL 21 HELIX 20 H20 VAL B 150 GLN B 171 1IN ALPHA/BETA BARREL 22 HELIX 21 H21 VAL B 195 ARG B 204 1IN ALPHA/BETA BARREL 10 HELIX 22 H22 VAL B 217 ALA B 223 1IN ALPHA/BETA BARREL 7 HELIX 23 H23 PHE B 227 ALA B 237 1IN ALPHA/BETA BARREL 11 HELIX 24 H24 ARG B 265 SER B 276 1IN ALPHA/BETA BARREL 12 HELIX 25 H25 ILE B 295 ALA B 321 1IN ALPHA/BETA BARREL 27 HELIX 26 H26 GLU B 324 ALA B 331 1IN ALPHA/BETA BARREL 8 HELIX 27 H27 LEU B 334 ALA B 338 1IN C-TERMINAL DOMAIN 5 HELIX 28 H28 VAL B 346 ASP B 352 1IN C-TERMINAL DOMAIN 7 HELIX 29 H29 VAL B 361 ALA B 366 1IN C-TERMINAL DOMAIN 6 HELIX 30 H30 PHE B 371 LEU B 382 1IN C-TERMINAL DOMAIN 12
SHEET 1 S1 9 PHE A 10 GLY A 13 0 SHEET 2 S1 9 GLY A 49 HIS A 53 1 SHEET 3 S1 9 THR A 84 THR A 90 1 SHEET 4 S1 9 THR A 132 GLU A 143 1 SHEET 5 S1 9 ARG A 176 PRO A 183 1 SHEET 6 S1 9 TYR A 211 GLU A 216 1 SHEET 7 S1 9 PHE A 241 ASN A 246 1 SHEET 8 S1 9 GLY A 278 ASP A 286 1 SHEET 9 S1 9 PHE A 10 GLY A 13 1 SHEET 1 S2 9 PHE B 10 GLY B 13 0 SHEET 2 S2 9 GLY B 49 HIS B 53 1 SHEET 3 S2 9 THR B 84 THR B 90 1 SHEET 4 S2 9 THR B 132 GLU B 143 1 SHEET 5 S2 9 ARG B 176 PRO B 183 1 SHEET 6 S2 9 TYR B 211 GLU B 216 1 SHEET 7 S2 9 PHE B 241 ASN B 246 1 SHEET 8 S2 9 GLY B 278 ASP B 286 1 SHEET 9 S2 9 PHE B 10 GLY B 13 1
LINK MG MG A 400 OE2 GLU A 180 1555 1555 2.42 LINK MG MG A 400 OE1 GLU A 216 1555 1555 2.31 LINK MG MG A 400 O1 HYA A 960 1555 1555 2.40 LINK MG MG A 400 O3 HYA A 960 1555 1555 2.37 LINK MG MG A 400 OD2 ASP A 244 1555 1555 2.38 LINK MG MG A 400 OD2 ASP A 286 1555 1555 2.39 LINK MG MG A 401 OE2 GLU A 216 1555 1555 2.42 LINK MG MG A 401 O HOH A1701 1555 1555 2.31 LINK MG MG A 401 NE2 HIS A 219 1555 1555 2.57 LINK MG MG A 401 OE1 GLU A 216 1555 1555 3.13 LINK MG MG A 401 O HOH A1700 1555 1555 2.42 LINK MG MG A 401 N HYA A 960 1555 1555 3.10 LINK MG MG A 401 O1 HYA A 960 1555 1555 2.40 LINK MG MG A 401 O HYA A 960 1555 1555 2.40 LINK MG MG B 400 OE1 GLU B 216 1555 1555 2.36 LINK MG MG B 400 OD2 ASP B 244 1555 1555 2.36 LINK MG MG B 400 OE1 GLU B 180 1555 1555 2.81 LINK MG MG B 400 OD2 ASP B 286 1555 1555 2.35 LINK MG MG B 400 O1 HYA B 970 1555 1555 2.43 LINK MG MG B 400 O3 HYA B 970 1555 1555 2.45 LINK MG MG B 400 OE2 GLU B 180 1555 1555 2.37 LINK MG MG B 401 NE2 HIS B 219 1555 1555 2.31 LINK MG MG B 401 O HOH B1801 1555 1555 2.42 LINK MG MG B 401 N HYA B 970 1555 1555 2.86 LINK MG MG B 401 O1 HYA B 970 1555 1555 2.62 LINK MG MG B 401 O HYA B 970 1555 1555 2.36 LINK MG MG B 401 O HOH B1800 1555 1555 2.41 LINK MG MG B 401 OE2 GLU B 216 1555 1555 2.36
CISPEP 1 GLU A 185 PRO A 186 0 13.91 CISPEP 2 GLU B 185 PRO B 186 0 22.39
SITE 1 M1A 6 MG A 400 GLU A 180 ASP A 244 ASP A 286 SITE 2 M1A 6 GLU A 216 HYA A 960 SITE 1 M2A 6 MG A 401 GLU A 216 HIS A 219 HYA A 960 SITE 2 M2A 6 HOH A1700 HOH A1701 SITE 1 M1B 6 MG B 400 GLU B 180 ASP B 244 ASP B 286 SITE 2 M1B 6 GLU B 216 HYA B 970 SITE 1 M2B 6 MG B 401 GLU B 216 HIS B 219 HYA B 970 SITE 2 M2B 6 HOH B1800 HOH B1801 SITE 1 HYA 3 HYA A 960 LYS A 182 HIS A 53 SITE 1 HYB 3 HYA B 970 LYS B 182 HIS B 53 SITE 1 AC1 5 GLU A 180 GLU A 216 ASP A 244 ASP A 286 SITE 2 AC1 5 HYA A 960 SITE 1 AC2 6 GLU A 216 HIS A 219 ASP A 256 HYA A 960 SITE 2 AC2 6 HOH A1700 HOH A1701 SITE 1 AC3 6 GLU B 180 GLU B 216 ASP B 244 ASP B 286 SITE 2 AC3 6 MG B 401 HYA B 970 SITE 1 AC4 6 GLU B 216 HIS B 219 MG B 400 HYA B 970 SITE 2 AC4 6 HOH B1800 HOH B1801 SITE 1 AC5 17 TRP A 15 HIS A 53 PHE A 93 TRP A 136 SITE 2 AC5 17 GLU A 180 LYS A 182 GLU A 216 HIS A 219 SITE 3 AC5 17 ASP A 244 ASP A 286 MG A 400 MG A 401 SITE 4 AC5 17 HOH A1166 HOH A1170 HOH A1338 HOH A1700 SITE 5 AC5 17 PHE B 25 SITE 1 AC6 16 PHE A 25 TRP B 15 HIS B 53 PHE B 93 SITE 2 AC6 16 TRP B 136 GLU B 180 LYS B 182 HIS B 219 SITE 3 AC6 16 ASP B 244 ASP B 286 MG B 400 MG B 401 SITE 4 AC6 16 HOH B1279 HOH B1281 HOH B1539 HOH B1800
CRYST1 86.900 99.050 93.650 90.00 90.00 90.00 P 21 21 2 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011507 0.000000 0.000000 0.00000
SCALE2 0.000000 0.010096 0.000000 0.00000
SCALE3 0.000000 0.000000 0.010678 0.00000
MTRIX1 1 0.999270 0.038290 -0.000450 -0.02028 1
MTRIX2 1 0.038290 -0.999270 0.001000 0.02478 1
MTRIX3 1 -0.000410 -0.001020 -1.000000 -47.31872 1