2GRW - Header Asymmetric Unit

HEADER RNA 25-APR-06 2GRW

TITLE SOLUTION STRUCTURE OF THE POLIOVIRUS 3'-UTR Y-STEM

COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-GGACCUCUCGAAAGAGAUGUCC-3'; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: POLIOVIRUS 3'-UTR Y-STEM; COMPND 5 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE IS A MUTANT OF POLIOVIRUS 3'- SOURCE 4 UTR Y-STEM

KEYWDS RNA, POLIOVIRUS, STEM-LOOP, PSEUDO-2-FOLD SYMMETRY

EXPDTA SOLUTION NMR

NUMMDL 12

AUTHOR H.A.HEUS,J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD,W.J.G.MELCHERS

REVDAT 3 24-FEB-09 2GRW 1 VERSN REVDAT 2 08-MAY-07 2GRW 1 JRNL REVDAT 1 06-MAR-07 2GRW 0

JRNL AUTH J.ZOLL,M.TESSARI,F.J.M.VAN KUPPEVELD, JRNL AUTH 2 W.J.G.MELCHERS,H.A.HEUS JRNL TITL BREAKING PSEUDO-TWOFOLD SYMMETRY IN THE POLIOVIRUS JRNL TITL 2 3'-UTR Y-STEM BY RESTORING WATSON-CRICK BASE PAIRS. JRNL REF RNA V. 13 781 2007 JRNL REFN ISSN 1355-8382 JRNL PMID 17449731 JRNL DOI 10.1261/RNA.375607

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : A.T. BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 2GRW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB037478.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300; 300; 300 REMARK 210 PH : 6.8; 6.8; 6.8 REMARK 210 IONIC STRENGTH : 5 MM; 5 MM; 5 MM REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM RNA 13C,15N, PH 6.8; 2MM REMARK 210 RNA 13C,15N, PH 6.8; 2MM RNA REMARK 210 13C, 15N, PH 6.8, 27 MG/ML REMARK 210 PHILAMENTOUS PHAGE PF1 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY, DQF-COSY, 2D TOCSY, REMARK 210 2D-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1, NMRPIPE 2.1, SPARKY REMARK 210 3.106, X-PLOR 3.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 12 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 G A 19 0.06 SIDE_CHAIN REMARK 500 2 G A 19 0.06 SIDE_CHAIN REMARK 500 3 G A 19 0.06 SIDE_CHAIN REMARK 500 4 G A 19 0.06 SIDE_CHAIN REMARK 500 5 G A 19 0.06 SIDE_CHAIN REMARK 500 6 G A 19 0.06 SIDE_CHAIN REMARK 500 7 G A 19 0.07 SIDE_CHAIN REMARK 500 8 G A 19 0.06 SIDE_CHAIN REMARK 500 9 G A 19 0.06 SIDE_CHAIN REMARK 500 10 G A 19 0.06 SIDE_CHAIN REMARK 500 11 G A 19 0.07 SIDE_CHAIN REMARK 500 12 G A 19 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL

REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2A82 RELATED DB: PDB

DBREF 2GRW A 1 22 PDB 2GRW 2GRW 1 22

SEQRES 1 A 22 G G A C C U C U C G A A A SEQRES 2 A 22 G A G A U G U C C

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000