10 20 30 40 50 60 70 80 2GQR - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER LIGASE 21-APR-06 2GQR
TITLE SAICAR SYNTHETASE COMPLEXED WITH ADP-MG2+
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE COMPND 3 SYNTHASE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: SAICAR SYNTHETASE; COMPND 6 EC: 6.3.2.6; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: PURC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS PURC, ADE2, ADE1, NUCLEOTIDE COMPLEX, OCTAHEDRAL MAGNESIUM KEYWDS 2 COORDINATION, ALTERNATE FOLDING, LIGASE
EXPDTA X-RAY DIFFRACTION
AUTHOR N.D.GINDER,R.B.HONZATKO
REVDAT 3 24-FEB-09 2GQR 1 VERSN REVDAT 2 08-AUG-06 2GQR 1 JRNL REVDAT 1 16-MAY-06 2GQR 0
JRNL AUTH N.D.GINDER,D.J.BINKOWSKI,H.J.FROMM,R.B.HONZATKO JRNL TITL NUCLEOTIDE COMPLEXES OF ESCHERICHIA COLI JRNL TITL 2 PHOSPHORIBOSYLAMINOIMIDAZOLE SUCCINOCARBOXAMIDE JRNL TITL 3 SYNTHETASE. JRNL REF J.BIOL.CHEM. V. 281 20680 2006 JRNL REFN ISSN 0021-9258 JRNL PMID 16687397 JRNL DOI 10.1074/JBC.M602109200
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1729656.250 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 40702 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4089 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5818 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 670 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3788 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 363 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -2.97000 REMARK 3 B33 (A**2) : 2.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM SIGMAA (A) : 0.14 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.18 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 3.55 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.310 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.030 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.540 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.470 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.40 REMARK 3 BSOL : 46.58 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2GQR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB037439.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900, 0.97884, 0.98671 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL-SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40775 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 46.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.020 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.42 REMARK 200 R MERGE FOR SHELL (I) : 0.33100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: WELL SOLUTION: 3.4-3.8 M SODIUM REMARK 280 FORMATE, 50 MM TRIS; PROTEIN SOLUTION: 15 MG/ML PROTEIN, 50 MM REMARK 280 ADP, 5 MM DTT, 5 MM EDTA, 15 MM TRIS, 25 MM KCL, 55 MM REMARK 280 MAGNESIUM CHLORIDE , PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 296K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.64500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.39000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.58000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.39000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.64500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.58000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HOMODIMER WITH 2-FOLD REMARK 300 SYMMETRY WHOLLY CONTAINED WITHIN THE ASYMMETRIC UNIT.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 36 -18.98 -43.24 REMARK 500 ALA A 38 57.04 32.74 REMARK 500 ARG A 45 -9.21 74.76 REMARK 500 PRO A 88 43.67 -70.73 REMARK 500 ASN A 124 95.41 -165.32 REMARK 500 ASP A 129 74.91 42.85 REMARK 500 VAL A 143 145.16 -170.65 REMARK 500 ASP A 191 -119.65 56.87 REMARK 500 GLN B 4 -62.59 -107.65 REMARK 500 ALA B 38 92.04 60.70 REMARK 500 ARG B 45 -8.74 71.80 REMARK 500 PRO B 88 46.82 -70.90 REMARK 500 ASN B 124 94.82 -161.08 REMARK 500 ASP B 129 71.08 45.74 REMARK 500 ASP B 191 -124.25 55.52 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 239 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 238 O2A REMARK 620 2 HOH A 240 O 176.0 REMARK 620 3 HOH A 242 O 95.5 81.3 REMARK 620 4 ADP A 238 O3B 90.5 87.1 90.0 REMARK 620 5 HOH A 241 O 99.0 83.3 86.7 170.2 REMARK 620 6 HOH A 243 O 82.3 101.0 175.4 94.1 89.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 239 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B 238 O3B REMARK 620 2 ADP B 238 O2A 94.4 REMARK 620 3 HOH B 241 O 168.9 92.2 REMARK 620 4 HOH B 243 O 102.5 89.7 86.4 REMARK 620 5 HOH B 242 O 91.0 97.0 79.4 164.5 REMARK 620 6 HOH B 240 O 85.7 178.5 87.4 91.8 81.5 REMARK 620 N 1 2 3 4 5
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 239 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 239 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 238 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 238
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ODB RELATED DB: PDB REMARK 900 RELATED ID: 1OBG RELATED DB: PDB REMARK 900 RELATED ID: 1A48 RELATED DB: PDB REMARK 900 RELATED ID: 1KUT RELATED DB: PDB REMARK 900 RELATED ID: 2GQS RELATED DB: PDB
DBREF 2GQR A 1 237 UNP P0A7D7 PUR7_ECOLI 1 237 DBREF 2GQR B 1 237 UNP P0A7D7 PUR7_ECOLI 1 237
SEQADV 2GQR MSE A 1 UNP P0A7D7 MET 1 MODIFIED RESIDUE SEQADV 2GQR MSE A 48 UNP P0A7D7 MET 48 MODIFIED RESIDUE SEQADV 2GQR MSE A 58 UNP P0A7D7 MET 58 MODIFIED RESIDUE SEQADV 2GQR MSE A 70 UNP P0A7D7 MET 70 MODIFIED RESIDUE SEQADV 2GQR MSE A 86 UNP P0A7D7 MET 86 MODIFIED RESIDUE SEQADV 2GQR MSE A 127 UNP P0A7D7 MET 127 MODIFIED RESIDUE SEQADV 2GQR MSE A 131 UNP P0A7D7 MET 131 MODIFIED RESIDUE SEQADV 2GQR MSE A 151 UNP P0A7D7 MET 151 MODIFIED RESIDUE SEQADV 2GQR MSE A 209 UNP P0A7D7 MET 209 MODIFIED RESIDUE SEQADV 2GQR MSE B 1 UNP P0A7D7 MET 1 MODIFIED RESIDUE SEQADV 2GQR MSE B 48 UNP P0A7D7 MET 48 MODIFIED RESIDUE SEQADV 2GQR MSE B 58 UNP P0A7D7 MET 58 MODIFIED RESIDUE SEQADV 2GQR MSE B 70 UNP P0A7D7 MET 70 MODIFIED RESIDUE SEQADV 2GQR MSE B 86 UNP P0A7D7 MET 86 MODIFIED RESIDUE SEQADV 2GQR MSE B 127 UNP P0A7D7 MET 127 MODIFIED RESIDUE SEQADV 2GQR MSE B 131 UNP P0A7D7 MET 131 MODIFIED RESIDUE SEQADV 2GQR MSE B 151 UNP P0A7D7 MET 151 MODIFIED RESIDUE SEQADV 2GQR MSE B 209 UNP P0A7D7 MET 209 MODIFIED RESIDUE
SEQRES 1 A 237 MSE GLN LYS GLN ALA GLU LEU TYR ARG GLY LYS ALA LYS SEQRES 2 A 237 THR VAL TYR SER THR GLU ASN PRO ASP LEU LEU VAL LEU SEQRES 3 A 237 GLU PHE ARG ASN ASP THR SER ALA GLY ASP GLY ALA ARG SEQRES 4 A 237 ILE GLU GLN PHE ASP ARG LYS GLY MSE VAL ASN ASN LYS SEQRES 5 A 237 PHE ASN TYR PHE ILE MSE SER LYS LEU ALA GLU ALA GLY SEQRES 6 A 237 ILE PRO THR GLN MSE GLU ARG LEU LEU SER ASP THR GLU SEQRES 7 A 237 CYS LEU VAL LYS LYS LEU ASP MSE VAL PRO VAL GLU CYS SEQRES 8 A 237 VAL VAL ARG ASN ARG ALA ALA GLY SER LEU VAL LYS ARG SEQRES 9 A 237 LEU GLY ILE GLU GLU GLY ILE GLU LEU ASN PRO PRO LEU SEQRES 10 A 237 PHE ASP LEU PHE LEU LYS ASN ASP ALA MSE HIS ASP PRO SEQRES 11 A 237 MSE VAL ASN GLU SER TYR CYS GLU THR PHE GLY TRP VAL SEQRES 12 A 237 SER LYS GLU ASN LEU ALA ARG MSE LYS GLU LEU THR TYR SEQRES 13 A 237 LYS ALA ASN ASP VAL LEU LYS LYS LEU PHE ASP ASP ALA SEQRES 14 A 237 GLY LEU ILE LEU VAL ASP PHE LYS LEU GLU PHE GLY LEU SEQRES 15 A 237 TYR LYS GLY GLU VAL VAL LEU GLY ASP GLU PHE SER PRO SEQRES 16 A 237 ASP GLY SER ARG LEU TRP ASP LYS GLU THR LEU GLU LYS SEQRES 17 A 237 MSE ASP LYS ASP ARG PHE ARG GLN SER LEU GLY GLY LEU SEQRES 18 A 237 ILE GLU ALA TYR GLU ALA VAL ALA ARG ARG LEU GLY VAL SEQRES 19 A 237 GLN LEU ASP SEQRES 1 B 237 MSE GLN LYS GLN ALA GLU LEU TYR ARG GLY LYS ALA LYS SEQRES 2 B 237 THR VAL TYR SER THR GLU ASN PRO ASP LEU LEU VAL LEU SEQRES 3 B 237 GLU PHE ARG ASN ASP THR SER ALA GLY ASP GLY ALA ARG SEQRES 4 B 237 ILE GLU GLN PHE ASP ARG LYS GLY MSE VAL ASN ASN LYS SEQRES 5 B 237 PHE ASN TYR PHE ILE MSE SER LYS LEU ALA GLU ALA GLY SEQRES 6 B 237 ILE PRO THR GLN MSE GLU ARG LEU LEU SER ASP THR GLU SEQRES 7 B 237 CYS LEU VAL LYS LYS LEU ASP MSE VAL PRO VAL GLU CYS SEQRES 8 B 237 VAL VAL ARG ASN ARG ALA ALA GLY SER LEU VAL LYS ARG SEQRES 9 B 237 LEU GLY ILE GLU GLU GLY ILE GLU LEU ASN PRO PRO LEU SEQRES 10 B 237 PHE ASP LEU PHE LEU LYS ASN ASP ALA MSE HIS ASP PRO SEQRES 11 B 237 MSE VAL ASN GLU SER TYR CYS GLU THR PHE GLY TRP VAL SEQRES 12 B 237 SER LYS GLU ASN LEU ALA ARG MSE LYS GLU LEU THR TYR SEQRES 13 B 237 LYS ALA ASN ASP VAL LEU LYS LYS LEU PHE ASP ASP ALA SEQRES 14 B 237 GLY LEU ILE LEU VAL ASP PHE LYS LEU GLU PHE GLY LEU SEQRES 15 B 237 TYR LYS GLY GLU VAL VAL LEU GLY ASP GLU PHE SER PRO SEQRES 16 B 237 ASP GLY SER ARG LEU TRP ASP LYS GLU THR LEU GLU LYS SEQRES 17 B 237 MSE ASP LYS ASP ARG PHE ARG GLN SER LEU GLY GLY LEU SEQRES 18 B 237 ILE GLU ALA TYR GLU ALA VAL ALA ARG ARG LEU GLY VAL SEQRES 19 B 237 GLN LEU ASP
MODRES 2GQR MSE A 1 MET SELENOMETHIONINE MODRES 2GQR MSE A 48 MET SELENOMETHIONINE MODRES 2GQR MSE A 58 MET SELENOMETHIONINE MODRES 2GQR MSE A 70 MET SELENOMETHIONINE MODRES 2GQR MSE A 86 MET SELENOMETHIONINE MODRES 2GQR MSE A 127 MET SELENOMETHIONINE MODRES 2GQR MSE A 131 MET SELENOMETHIONINE MODRES 2GQR MSE A 151 MET SELENOMETHIONINE MODRES 2GQR MSE A 209 MET SELENOMETHIONINE MODRES 2GQR MSE B 1 MET SELENOMETHIONINE MODRES 2GQR MSE B 48 MET SELENOMETHIONINE MODRES 2GQR MSE B 58 MET SELENOMETHIONINE MODRES 2GQR MSE B 70 MET SELENOMETHIONINE MODRES 2GQR MSE B 86 MET SELENOMETHIONINE MODRES 2GQR MSE B 127 MET SELENOMETHIONINE MODRES 2GQR MSE B 131 MET SELENOMETHIONINE MODRES 2GQR MSE B 151 MET SELENOMETHIONINE MODRES 2GQR MSE B 209 MET SELENOMETHIONINE
HET MSE A 1 8 HET MSE A 48 8 HET MSE A 58 8 HET MSE A 70 8 HET MSE A 86 8 HET MSE A 127 8 HET MSE A 131 8 HET MSE A 151 8 HET MSE A 209 8 HET MSE B 1 8 HET MSE B 48 8 HET MSE B 58 8 HET MSE B 70 8 HET MSE B 86 8 HET MSE B 127 8 HET MSE B 131 8 HET MSE B 151 8 HET MSE B 209 8 HET MG A 239 1 HET MG B 239 1 HET ADP A 238 27 HET ADP B 238 27
HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE
FORMUL 1 MSE 18(C5 H11 N O2 SE) FORMUL 3 MG 2(MG 2+) FORMUL 5 ADP 2(C10 H15 N5 O10 P2) FORMUL 7 HOH *363(H2 O)
HELIX 1 1 ARG A 45 ALA A 64 1 20 HELIX 2 2 ALA A 98 GLY A 106 1 9 HELIX 3 3 ASN A 124 HIS A 128 5 5 HELIX 4 4 ASN A 133 PHE A 140 1 8 HELIX 5 5 SER A 144 ALA A 169 1 26 HELIX 6 6 LYS A 211 GLN A 216 1 6 HELIX 7 7 GLY A 220 GLY A 233 1 14 HELIX 8 8 ARG B 45 ALA B 64 1 20 HELIX 9 9 ALA B 98 GLY B 106 1 9 HELIX 10 10 ASN B 133 PHE B 140 1 8 HELIX 11 11 SER B 144 ALA B 169 1 26 HELIX 12 12 LYS B 211 GLN B 216 1 6 HELIX 13 13 GLY B 220 GLY B 233 1 14
SHEET 1 A 5 ALA A 5 ARG A 9 0 SHEET 2 A 5 LYS A 13 SER A 17 -1 O VAL A 15 N TYR A 8 SHEET 3 A 5 LEU A 23 PHE A 28 -1 O VAL A 25 N TYR A 16 SHEET 4 A 5 GLU A 78 LYS A 82 -1 O VAL A 81 N LEU A 24 SHEET 5 A 5 MSE A 70 LEU A 73 -1 N ARG A 72 O LEU A 80 SHEET 1 B 2 ASP A 31 THR A 32 0 SHEET 2 B 2 GLU A 41 GLN A 42 -1 O GLU A 41 N THR A 32 SHEET 1 C 3 ASP A 85 MSE A 86 0 SHEET 2 C 3 LEU A 171 TYR A 183 -1 O LEU A 182 N ASP A 85 SHEET 3 C 3 GLU A 186 GLY A 190 -1 O VAL A 188 N GLY A 181 SHEET 1 D 5 MSE A 131 VAL A 132 0 SHEET 2 D 5 GLU A 112 LEU A 122 -1 N LEU A 120 O VAL A 132 SHEET 3 D 5 VAL A 89 ARG A 96 -1 N ASN A 95 O LEU A 113 SHEET 4 D 5 LEU A 171 TYR A 183 -1 O VAL A 174 N ASN A 95 SHEET 5 D 5 SER A 198 ASP A 202 -1 O TRP A 201 N ILE A 172 SHEET 1 E 5 GLU B 6 ARG B 9 0 SHEET 2 E 5 LYS B 13 TYR B 16 -1 O VAL B 15 N LEU B 7 SHEET 3 E 5 LEU B 23 PHE B 28 -1 O VAL B 25 N TYR B 16 SHEET 4 E 5 GLU B 78 LYS B 82 -1 O VAL B 81 N LEU B 24 SHEET 5 E 5 MSE B 70 LEU B 73 -1 N ARG B 72 O LEU B 80 SHEET 1 F 2 ASP B 31 THR B 32 0 SHEET 2 F 2 GLU B 41 GLN B 42 -1 O GLU B 41 N THR B 32 SHEET 1 G 3 ASP B 85 MSE B 86 0 SHEET 2 G 3 LEU B 171 TYR B 183 -1 O LEU B 182 N ASP B 85 SHEET 3 G 3 GLU B 186 GLY B 190 -1 O VAL B 188 N GLY B 181 SHEET 1 H 5 MSE B 131 VAL B 132 0 SHEET 2 H 5 GLU B 112 LEU B 122 -1 N LEU B 120 O VAL B 132 SHEET 3 H 5 VAL B 89 ARG B 96 -1 N VAL B 92 O ASP B 119 SHEET 4 H 5 LEU B 171 TYR B 183 -1 O VAL B 174 N ASN B 95 SHEET 5 H 5 SER B 198 ASP B 202 -1 O TRP B 201 N ILE B 172
LINK C MSE A 1 N GLN A 2 1555 1555 1.33 LINK C GLY A 47 N MSE A 48 1555 1555 1.33 LINK C MSE A 48 N VAL A 49 1555 1555 1.33 LINK C ILE A 57 N MSE A 58 1555 1555 1.33 LINK C MSE A 58 N SER A 59 1555 1555 1.33 LINK C GLN A 69 N MSE A 70 1555 1555 1.33 LINK C MSE A 70 N GLU A 71 1555 1555 1.33 LINK C ASP A 85 N MSE A 86 1555 1555 1.33 LINK C MSE A 86 N VAL A 87 1555 1555 1.33 LINK C ALA A 126 N MSE A 127 1555 1555 1.33 LINK C MSE A 127 N HIS A 128 1555 1555 1.33 LINK C PRO A 130 N MSE A 131 1555 1555 1.32 LINK C MSE A 131 N VAL A 132 1555 1555 1.33 LINK C ARG A 150 N MSE A 151 1555 1555 1.33 LINK C MSE A 151 N LYS A 152 1555 1555 1.33 LINK C LYS A 208 N MSE A 209 1555 1555 1.33 LINK C MSE A 209 N ASP A 210 1555 1555 1.33 LINK O2A ADP A 238 MG MG A 239 1555 1555 2.03 LINK MG MG A 239 O HOH A 240 1555 1555 2.09 LINK MG MG A 239 O HOH A 242 1555 1555 2.17 LINK MG MG A 239 O3B ADP A 238 1555 1555 2.11 LINK MG MG A 239 O HOH A 241 1555 1555 2.14 LINK MG MG A 239 O HOH A 243 1555 1555 2.08 LINK C MSE B 1 N GLN B 2 1555 1555 1.33 LINK C GLY B 47 N MSE B 48 1555 1555 1.32 LINK C MSE B 48 N VAL B 49 1555 1555 1.33 LINK C ILE B 57 N MSE B 58 1555 1555 1.33 LINK C MSE B 58 N SER B 59 1555 1555 1.33 LINK C GLN B 69 N MSE B 70 1555 1555 1.32 LINK C MSE B 70 N GLU B 71 1555 1555 1.33 LINK C ASP B 85 N MSE B 86 1555 1555 1.33 LINK C MSE B 86 N VAL B 87 1555 1555 1.33 LINK C ALA B 126 N MSE B 127 1555 1555 1.33 LINK C MSE B 127 N HIS B 128 1555 1555 1.33 LINK C PRO B 130 N MSE B 131 1555 1555 1.32 LINK C MSE B 131 N VAL B 132 1555 1555 1.33 LINK C ARG B 150 N MSE B 151 1555 1555 1.33 LINK C MSE B 151 N LYS B 152 1555 1555 1.33 LINK C LYS B 208 N MSE B 209 1555 1555 1.33 LINK C MSE B 209 N ASP B 210 1555 1555 1.33 LINK O3B ADP B 238 MG MG B 239 1555 1555 1.99 LINK MG MG B 239 O2A ADP B 238 1555 1555 2.17 LINK MG MG B 239 O HOH B 241 1555 1555 2.19 LINK MG MG B 239 O HOH B 243 1555 1555 2.12 LINK MG MG B 239 O HOH B 242 1555 1555 2.20 LINK MG MG B 239 O HOH B 240 1555 1555 2.13
CISPEP 1 ASN A 114 PRO A 115 0 -0.54 CISPEP 2 ASN B 114 PRO B 115 0 -0.38
SITE 1 AC1 5 ADP A 238 HOH A 240 HOH A 241 HOH A 242 SITE 2 AC1 5 HOH A 243 SITE 1 AC2 5 ADP B 238 HOH B 240 HOH B 241 HOH B 242 SITE 2 AC2 5 HOH B 243 SITE 1 AC3 23 TYR A 8 GLY A 10 LYS A 11 ALA A 12 SITE 2 AC3 23 LYS A 13 VAL A 15 LEU A 24 GLN A 69 SITE 3 AC3 23 LYS A 82 LEU A 84 MSE A 86 LYS A 123 SITE 4 AC3 23 GLU A 179 ASP A 191 MG A 239 HOH A 240 SITE 5 AC3 23 HOH A 242 HOH A 243 HOH A 256 HOH A 266 SITE 6 AC3 23 HOH A 291 HOH A 343 HOH A 354 SITE 1 AC4 23 TYR B 8 GLY B 10 LYS B 11 ALA B 12 SITE 2 AC4 23 LYS B 13 VAL B 15 LEU B 24 GLN B 69 SITE 3 AC4 23 VAL B 81 LYS B 82 LEU B 84 MSE B 86 SITE 4 AC4 23 LYS B 123 GLU B 179 ASP B 191 MG B 239 SITE 5 AC4 23 HOH B 240 HOH B 242 HOH B 243 HOH B 251 SITE 6 AC4 23 HOH B 311 HOH B 324 HOH B 336
CRYST1 59.290 67.160 148.780 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.016870 0.000000 0.000000 0.00000
SCALE2 0.000000 0.014890 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006720 0.00000