10 20 30 40 50 60 70 80 2GPT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER OXIDOREDUCTASE, LYASE 18-APR-06 2GPT
TITLE CRYSTAL STRUCTURE OF ARABIDOPSIS DEHYDROQUINATE DEHYDRATASE- TITLE 2 SHIKIMATE DEHYDROGENASE IN COMPLEX WITH TARTRATE AND TITLE 3 SHIKIMATE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-DEHYDROQUINATE DEHYDRATASE/ SHIKIMATE 5- COMPND 3 DEHYDROGENASE; COMPND 4 CHAIN: A; COMPND 5 EC: 4.2.1.10, 1.1.1.25; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS TYPE I DEHYDROQUINATE DEHYDRATASE, AROE, SHIKIMATE KEYWDS 2 DEHYDROGENASE, ARABIDOPSIS THALIANA, SHIKIMATE, TARTRATE, KEYWDS 3 BIFUNCTIONAL ENZYME, OXIDOREDUCTASE, LYASE
EXPDTA X-RAY DIFFRACTION
AUTHOR S.A.SINGH,D.CHRISTENDAT
REVDAT 3 24-FEB-09 2GPT 1 VERSN REVDAT 2 04-JUL-06 2GPT 1 JRNL REVDAT 1 06-JUN-06 2GPT 0
JRNL AUTH S.A.SINGH,D.CHRISTENDAT JRNL TITL STRUCTURE OF ARABIDOPSIS DEHYDROQUINATE JRNL TITL 2 DEHYDRATASE-SHIKIMATE DEHYDROGENASE AND JRNL TITL 3 IMPLICATIONS FOR METABOLIC CHANNELING IN THE JRNL TITL 4 SHIKIMATE PATHWAY JRNL REF BIOCHEMISTRY V. 45 7787 2006 JRNL REFN ISSN 0006-2960 JRNL PMID 16784230 JRNL DOI 10.1021/BI060366+
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 279246.460 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 43932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1309 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6535 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.50 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 170 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.025 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3840 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 271 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.82000 REMARK 3 B22 (A**2) : -0.82000 REMARK 3 B33 (A**2) : 1.63000 REMARK 3 B12 (A**2) : 0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.27 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.80 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.88 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.230 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.950 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.770 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.580 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 56.12 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTVIV.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : WATER.PARAM REMARK 3 PARAMETER FILE 4 : SHK.PARAM REMARK 3 PARAMETER FILE 5 : TARVIV.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTVIV.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : TARVIV.TOP REMARK 3 TOPOLOGY FILE 5 : SHK.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2GPT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB037405.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-04; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X8C; X8C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795; 1.1000 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CAD4 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46428 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : 0.04400 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 42.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.63500 REMARK 200 R SYM FOR SHELL (I) : 0.53700 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4 MM SODIUM TARTRATE REMARK 280 TETRAHYDRATE, 0.1 M TRI-SODIUM CITRATE DIHYDRATE PH5.6, 2.8 M REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.43800 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.71900 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.71900 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.43800 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A MONOMER
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 436 REMARK 465 SER A 437 REMARK 465 SER A 438 REMARK 465 GLY A 439 REMARK 465 ASP A 440 REMARK 465 PRO A 441 REMARK 465 SER A 442 REMARK 465 SER A 443 REMARK 465 VAL A 444 REMARK 465 PRO A 445 REMARK 465 SER A 446 REMARK 465 SER A 447 REMARK 465 SER A 448 REMARK 465 SER A 449 REMARK 465 PRO A 450 REMARK 465 LEU A 451 REMARK 465 ALA A 452 REMARK 465 SER A 453 REMARK 465 LYS A 454 REMARK 465 ALA A 489 REMARK 465 LEU A 490 REMARK 465 GLY A 498 REMARK 465 LYS A 499 REMARK 465 HIS A 510 REMARK 465 PRO A 511
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 91 -142.72 70.05 REMARK 500 PRO A 135 -73.41 -35.20 REMARK 500 ASN A 218 -164.08 -164.06 REMARK 500 PRO A 220 171.02 -54.68 REMARK 500 LYS A 298 59.41 -100.19 REMARK 500 LYS A 331 107.81 -162.86 REMARK 500 VAL A 333 -12.43 -143.47 REMARK 500 SER A 413 -85.79 -39.01 REMARK 500 ALA A 477 159.05 -41.97 REMARK 500 TYR A 486 -54.95 -24.51 REMARK 500 LEU A 501 147.62 -179.52 REMARK 500 LEU A 503 -64.16 -27.27 REMARK 500 REMARK 500 REMARK: NULL
REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A5181 DISTANCE = 5.88 ANGSTROMS
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1402 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1403 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TLA A 4988 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SKM A 4733
DBREF 2GPT A 90 603 UNP Q9SQT8 Q9SQT8_ARATH 90 603
SEQADV 2GPT GLY A 604 UNP Q9SQT8 CLONING ARTIFACT SEQADV 2GPT SER A 605 UNP Q9SQT8 CLONING ARTIFACT SEQADV 2GPT ARG A 606 UNP Q9SQT8 CLONING ARTIFACT SEQADV 2GPT GLU A 607 UNP Q9SQT8 CLONING ARTIFACT SEQADV 2GPT ASN A 608 UNP Q9SQT8 CLONING ARTIFACT SEQADV 2GPT LEU A 609 UNP Q9SQT8 CLONING ARTIFACT SEQADV 2GPT TYR A 610 UNP Q9SQT8 CLONING ARTIFACT SEQADV 2GPT PHE A 611 UNP Q9SQT8 CLONING ARTIFACT SEQADV 2GPT GLN A 612 UNP Q9SQT8 CLONING ARTIFACT
SEQRES 1 A 523 VAL LYS ASN PRO SER LEU ILE CYS ALA PRO VAL MET ALA SEQRES 2 A 523 ASP SER ILE ASP LYS MET VAL ILE GLU THR SER LYS ALA SEQRES 3 A 523 HIS GLU LEU GLY ALA ASP LEU VAL GLU ILE ARG LEU ASP SEQRES 4 A 523 TRP LEU LYS ASP PHE ASN PRO LEU GLU ASP LEU LYS THR SEQRES 5 A 523 ILE ILE LYS LYS SER PRO LEU PRO THR LEU PHE THR TYR SEQRES 6 A 523 ARG PRO LYS TRP GLU GLY GLY GLN TYR GLU GLY ASP GLU SEQRES 7 A 523 ASN GLU ARG ARG ASP VAL LEU ARG LEU ALA MET GLU LEU SEQRES 8 A 523 GLY ALA ASP TYR ILE ASP VAL GLU LEU GLN VAL ALA SER SEQRES 9 A 523 GLU PHE ILE LYS SER ILE ASP GLY LYS LYS PRO GLY LYS SEQRES 10 A 523 PHE LYS VAL ILE VAL SER SER HIS ASN TYR GLN ASN THR SEQRES 11 A 523 PRO SER VAL GLU ASP LEU ASP GLY LEU VAL ALA ARG ILE SEQRES 12 A 523 GLN GLN THR GLY ALA ASP ILE VAL LYS ILE ALA THR THR SEQRES 13 A 523 ALA VAL ASP ILE ALA ASP VAL ALA ARG MET PHE HIS ILE SEQRES 14 A 523 THR SER LYS ALA GLN VAL PRO THR ILE GLY LEU VAL MET SEQRES 15 A 523 GLY GLU ARG GLY LEU MET SER ARG ILE LEU CYS SER LYS SEQRES 16 A 523 PHE GLY GLY TYR LEU THR PHE GLY THR LEU ASP SER SER SEQRES 17 A 523 LYS VAL SER ALA PRO GLY GLN PRO THR ILE LYS ASP LEU SEQRES 18 A 523 LEU ASP LEU TYR ASN PHE ARG ARG ILE GLY PRO ASP THR SEQRES 19 A 523 LYS VAL TYR GLY ILE ILE GLY LYS PRO VAL SER HIS SER SEQRES 20 A 523 LYS SER PRO ILE VAL HIS ASN GLN ALA PHE LYS SER VAL SEQRES 21 A 523 ASP PHE ASN GLY VAL TYR VAL HIS LEU LEU VAL ASP ASN SEQRES 22 A 523 LEU VAL SER PHE LEU GLN ALA TYR SER SER SER ASP PHE SEQRES 23 A 523 ALA GLY PHE SER CYS THR ILE PRO HIS LYS GLU ALA ALA SEQRES 24 A 523 LEU GLN CYS CYS ASP GLU VAL ASP PRO LEU ALA LYS SER SEQRES 25 A 523 ILE GLY ALA VAL ASN THR ILE LEU ARG ARG LYS SER ASP SEQRES 26 A 523 GLY LYS LEU LEU GLY TYR ASN THR ASP CYS ILE GLY SER SEQRES 27 A 523 ILE SER ALA ILE GLU ASP GLY LEU ARG SER SER GLY ASP SEQRES 28 A 523 PRO SER SER VAL PRO SER SER SER SER PRO LEU ALA SER SEQRES 29 A 523 LYS THR VAL VAL VAL ILE GLY ALA GLY GLY ALA GLY LYS SEQRES 30 A 523 ALA LEU ALA TYR GLY ALA LYS GLU LYS GLY ALA LYS VAL SEQRES 31 A 523 VAL ILE ALA ASN ARG THR TYR GLU ARG ALA LEU GLU LEU SEQRES 32 A 523 ALA GLU ALA ILE GLY GLY LYS ALA LEU SER LEU THR ASP SEQRES 33 A 523 LEU ASP ASN TYR HIS PRO GLU ASP GLY MET VAL LEU ALA SEQRES 34 A 523 ASN THR THR SER MET GLY MET GLN PRO ASN VAL GLU GLU SEQRES 35 A 523 THR PRO ILE SER LYS ASP ALA LEU LYS HIS TYR ALA LEU SEQRES 36 A 523 VAL PHE ASP ALA VAL TYR THR PRO ARG ILE THR ARG LEU SEQRES 37 A 523 LEU ARG GLU ALA GLU GLU SER GLY ALA ILE THR VAL SER SEQRES 38 A 523 GLY SER GLU MET PHE VAL ARG GLN ALA TYR GLU GLN PHE SEQRES 39 A 523 GLU ILE PHE THR GLY LEU PRO ALA PRO LYS GLU LEU TYR SEQRES 40 A 523 TRP GLN ILE MET SER LYS TYR GLY SER ARG GLU ASN LEU SEQRES 41 A 523 TYR PHE GLN
HET SO4 A1402 5 HET SO4 A1403 5 HET TLA A4988 10 HET SKM A4733 12
HETNAM SO4 SULFATE ION HETNAM TLA L(+)-TARTARIC ACID HETNAM SKM (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1- HETNAM 2 SKM CARBOXYLIC ACID
HETSYN SKM SHIKIMATE
FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 TLA C4 H6 O6 FORMUL 5 SKM C7 H10 O5 FORMUL 6 HOH *271(H2 O)
HELIX 1 1 SER A 104 GLY A 119 1 16 HELIX 2 2 ASP A 128 LEU A 130 5 3 HELIX 3 3 ASN A 134 SER A 146 1 13 HELIX 4 4 PRO A 156 GLY A 160 5 5 HELIX 5 5 ASP A 166 LEU A 180 1 15 HELIX 6 6 LEU A 189 ILE A 199 1 11 HELIX 7 7 SER A 221 THR A 235 1 15 HELIX 8 8 ASP A 248 ALA A 250 5 3 HELIX 9 9 ASP A 251 ALA A 262 1 12 HELIX 10 10 GLY A 272 ARG A 274 5 3 HELIX 11 11 GLY A 275 LEU A 281 1 7 HELIX 12 12 THR A 306 LEU A 313 1 8 HELIX 13 13 ASN A 315 ILE A 319 5 5 HELIX 14 14 LYS A 337 VAL A 349 1 13 HELIX 15 15 ASN A 362 TYR A 370 1 9 HELIX 16 16 HIS A 384 CYS A 392 1 9 HELIX 17 17 ASP A 396 GLY A 403 1 8 HELIX 18 18 THR A 422 LEU A 435 1 14 HELIX 19 19 GLY A 462 LYS A 475 1 14 HELIX 20 20 GLU A 491 GLY A 497 1 7 HELIX 21 21 SER A 502 ASP A 507 1 6 HELIX 22 22 ALA A 538 LYS A 540 5 3 HELIX 23 23 THR A 555 GLU A 563 1 9 HELIX 24 24 SER A 570 GLY A 588 1 19 HELIX 25 25 PRO A 592 GLY A 604 1 13
SHEET 1 A 8 THR A 266 MET A 271 0 SHEET 2 A 8 ILE A 239 THR A 245 1 N THR A 244 O MET A 271 SHEET 3 A 8 LYS A 208 HIS A 214 1 N SER A 213 O ALA A 243 SHEET 4 A 8 TYR A 184 GLU A 188 1 N VAL A 187 O ILE A 210 SHEET 5 A 8 THR A 150 THR A 153 1 N PHE A 152 O ASP A 186 SHEET 6 A 8 LEU A 122 ARG A 126 1 N ILE A 125 O LEU A 151 SHEET 7 A 8 LEU A 95 VAL A 100 1 N VAL A 100 O GLU A 124 SHEET 8 A 8 LEU A 289 PHE A 291 1 O THR A 290 N CYS A 97 SHEET 1 B 6 GLY A 353 LEU A 359 0 SHEET 2 B 6 LYS A 324 GLY A 330 1 N TYR A 326 O VAL A 354 SHEET 3 B 6 PHE A 375 CYS A 380 1 O SER A 379 N ILE A 329 SHEET 4 B 6 THR A 407 ARG A 410 -1 O ARG A 410 N ALA A 376 SHEET 5 B 6 LEU A 417 TYR A 420 -1 O TYR A 420 N THR A 407 SHEET 6 B 6 GLU A 394 VAL A 395 1 N GLU A 394 O GLY A 419 SHEET 1 C 5 VAL A 479 ALA A 482 0 SHEET 2 C 5 VAL A 456 ILE A 459 1 N VAL A 458 O VAL A 480 SHEET 3 C 5 MET A 515 ASN A 519 1 O VAL A 516 N VAL A 457 SHEET 4 C 5 TYR A 542 ASP A 547 1 O PHE A 546 N LEU A 517 SHEET 5 C 5 ILE A 567 VAL A 569 1 O ILE A 567 N ALA A 543
CISPEP 1 LYS A 331 PRO A 332 0 -0.26 CISPEP 2 ILE A 382 PRO A 383 0 0.28 CISPEP 3 GLN A 526 PRO A 527 0 1.15 CISPEP 4 THR A 551 PRO A 552 0 1.61
SITE 1 AC1 10 ILE A 382 PRO A 383 HIS A 384 LYS A 385 SITE 2 AC1 10 GLU A 386 GLY A 462 GLY A 463 HOH A5062 SITE 3 AC1 10 HOH A5081 HOH A5125 SITE 1 AC2 4 TRP A 158 PRO A 332 PRO A 527 HOH A4996 SITE 1 AC3 11 ARG A 155 HIS A 214 LYS A 241 MET A 271 SITE 2 AC3 11 ARG A 279 ALA A 301 GLN A 304 HOH A5038 SITE 3 AC3 11 HOH A5066 HOH A5075 HOH A5210 SITE 1 AC4 12 ILE A 328 SER A 336 SER A 338 SER A 379 SITE 2 AC4 12 THR A 381 LYS A 385 ASN A 406 ASP A 423 SITE 3 AC4 12 TYR A 550 GLN A 578 GLN A 582 HOH A5028
CRYST1 96.934 96.934 116.157 90.00 90.00 120.00 P 32 2 1 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.010316 0.005956 0.000000 0.00000
SCALE2 0.000000 0.011912 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008609 0.00000