10 20 30 40 50 60 70 80 2GGR - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PROTEIN BINDING 24-MAR-06 2GGR
TITLE SOLUTION STRUCTURE OF THE C-TERMINAL SH3 DOMAIN OF C-CRKII
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTO-ONCOGENE C-CRK; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN; COMPND 5 SYNONYM: P38, ADAPTER MOLECULE CRK; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CRK, CRKO; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTRCHISA
KEYWDS SOLUTION STRUCTURE, NMR, CRK-II, SH3 DOMAIN, PROTEIN BINDING
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR V.MURALIDHARAN,K.DUTTA,T.W.MUIR,D.COWBURN
REVDAT 2 24-FEB-09 2GGR 1 VERSN REVDAT 1 01-AUG-06 2GGR 0
JRNL AUTH V.MURALIDHARAN,K.DUTTA,J.CHO,M.VILA-PERELLO, JRNL AUTH 2 D.P.RALEIGH,D.COWBURN,T.W.MUIR JRNL TITL SOLUTION STRUCTURE AND FOLDING CHARACTERISTICS OF JRNL TITL 2 THE C-TERMINAL SH3 DOMAIN OF C-CRK-II JRNL REF BIOCHEMISTRY V. 45 8874 2006 JRNL REFN ISSN 0006-2960 JRNL PMID 16846230 JRNL DOI 10.1021/BI060590Z
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2GGR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAR-06. REMARK 100 THE RCSB ID CODE IS RCSB037097.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 50MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4 MM CSH3 DOMAIN U-15N,13C; REMARK 210 10MM PHOSPHATE BUFFER PH7.2; REMARK 210 50MM NACL; 5MM DTT-D10; 0.1% REMARK 210 NAN3; 1MM EDTA; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY, 3D_13C_ REMARK 210 AROMATIC_NOESY, HNHA, HNCO_3J REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 700 MHZ, 800 MHZ, REMARK 210 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE, INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER, VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 2.2 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 229 REMARK 465 LEU A 230 REMARK 465 PRO A 231 REMARK 465 ASN A 232 REMARK 465 LEU A 233 REMARK 465 GLN A 234 REMARK 465 ASN A 235 REMARK 465 PRO A 299 REMARK 465 ASP A 300 REMARK 465 GLU A 301 REMARK 465 ASP A 302 REMARK 465 PHE A 303 REMARK 465 SER A 304
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 244 95.44 -176.90 REMARK 500 1 VAL A 247 70.87 -110.52 REMARK 500 1 ASP A 252 47.81 -95.38 REMARK 500 1 THR A 254 86.22 63.79 REMARK 500 1 ASN A 280 61.31 24.38 REMARK 500 2 GLN A 244 95.43 -176.35 REMARK 500 2 ASP A 252 56.54 -104.56 REMARK 500 2 THR A 254 75.54 59.26 REMARK 500 2 ASN A 280 56.52 34.40 REMARK 500 3 PRO A 237 147.73 -39.99 REMARK 500 3 GLN A 244 95.39 -176.17 REMARK 500 3 VAL A 247 75.67 -108.39 REMARK 500 3 ASP A 252 51.97 -96.88 REMARK 500 3 THR A 254 88.08 65.61 REMARK 500 3 ASN A 280 56.69 39.45 REMARK 500 4 GLN A 244 93.17 -176.59 REMARK 500 4 ASP A 252 65.45 -105.60 REMARK 500 4 ASN A 280 61.31 28.84 REMARK 500 4 HIS A 290 55.13 -119.98 REMARK 500 5 GLN A 244 94.06 -177.80 REMARK 500 5 VAL A 247 78.83 -104.13 REMARK 500 5 ASP A 252 49.19 -95.60 REMARK 500 5 THR A 254 77.63 59.55 REMARK 500 6 PRO A 237 141.79 -38.72 REMARK 500 6 GLN A 244 94.55 -176.30 REMARK 500 6 VAL A 247 75.33 -108.28 REMARK 500 6 ALA A 250 9.70 -69.46 REMARK 500 6 ASP A 252 67.96 -105.28 REMARK 500 6 THR A 254 73.48 55.66 REMARK 500 6 ASN A 280 57.19 33.65 REMARK 500 7 GLN A 244 102.60 -178.47 REMARK 500 7 VAL A 247 75.94 -100.85 REMARK 500 7 ASP A 252 49.27 -103.85 REMARK 500 7 THR A 254 81.94 61.12 REMARK 500 7 THR A 289 1.78 -68.62 REMARK 500 7 HIS A 290 33.71 -147.25 REMARK 500 7 GLN A 297 -34.95 175.33 REMARK 500 8 GLN A 244 94.08 -172.25 REMARK 500 8 VAL A 247 72.46 -110.48 REMARK 500 8 ASP A 252 63.73 -105.41 REMARK 500 8 ASN A 280 55.13 36.38 REMARK 500 9 GLN A 244 95.58 -178.22 REMARK 500 9 VAL A 247 75.48 -101.72 REMARK 500 9 ASP A 252 55.02 -93.34 REMARK 500 9 THR A 254 83.59 64.65 REMARK 500 9 ASN A 280 60.33 28.69 REMARK 500 9 GLN A 297 20.06 178.76 REMARK 500 10 GLN A 244 99.32 -173.78 REMARK 500 10 VAL A 247 77.45 -105.81 REMARK 500 10 ASP A 252 49.58 -102.73 REMARK 500 10 THR A 254 74.65 59.37 REMARK 500 10 HIS A 290 44.28 -141.64 REMARK 500 11 GLN A 244 98.51 -177.37 REMARK 500 11 VAL A 247 69.31 -108.98 REMARK 500 11 ASP A 252 53.47 -98.12 REMARK 500 11 THR A 254 87.01 62.09 REMARK 500 12 GLN A 244 106.91 -177.33 REMARK 500 12 VAL A 247 69.37 -110.51 REMARK 500 12 ALA A 250 4.86 -67.77 REMARK 500 12 ASP A 252 55.73 -101.17 REMARK 500 12 THR A 254 85.19 61.42 REMARK 500 12 ASN A 280 55.89 31.63 REMARK 500 13 GLN A 244 94.14 -173.94 REMARK 500 13 VAL A 247 77.96 -102.40 REMARK 500 13 ASP A 252 48.11 -105.04 REMARK 500 13 THR A 254 77.55 57.03 REMARK 500 14 GLN A 244 94.95 -177.00 REMARK 500 14 ASP A 252 48.35 -92.06 REMARK 500 14 THR A 254 83.35 64.98 REMARK 500 15 GLN A 244 94.60 -177.23 REMARK 500 15 ASP A 252 51.08 -97.96 REMARK 500 15 THR A 254 86.05 63.83 REMARK 500 15 ASN A 280 58.11 36.89 REMARK 500 16 GLN A 244 99.72 -164.37 REMARK 500 16 VAL A 247 75.76 -105.67 REMARK 500 16 ASP A 252 45.23 -96.31 REMARK 500 16 THR A 254 80.72 62.17 REMARK 500 16 ASN A 280 55.81 39.65 REMARK 500 17 GLN A 244 95.69 -178.10 REMARK 500 17 VAL A 247 69.68 -106.36 REMARK 500 17 ALA A 250 -8.13 -59.85 REMARK 500 17 ASP A 252 66.85 -104.67 REMARK 500 18 GLN A 244 106.00 -177.28 REMARK 500 18 VAL A 247 76.95 -104.22 REMARK 500 18 ASP A 252 60.21 -105.95 REMARK 500 18 ASN A 280 55.93 38.40 REMARK 500 18 HIS A 290 38.21 -155.77 REMARK 500 19 GLN A 244 95.24 -176.92 REMARK 500 19 ASP A 252 63.72 -105.15 REMARK 500 19 THR A 254 75.86 56.06 REMARK 500 20 GLN A 244 95.67 -176.29 REMARK 500 20 ALA A 250 0.25 -64.20 REMARK 500 20 ASP A 252 53.19 -104.74 REMARK 500 20 THR A 254 71.30 59.10 REMARK 500 20 ASN A 280 61.56 24.95 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CKA RELATED DB: PDB REMARK 900 N TERMINAL SH3 DOMAIN OF CRKII REMARK 900 RELATED ID: 1JEG RELATED DB: PDB REMARK 900 SH3 DOMAIN OF CSK
DBREF 2GGR A 230 304 UNP Q64010 CRK_MOUSE 230 304
SEQADV 2GGR GLY A 229 UNP Q64010 CLONING ARTIFACT
SEQRES 1 A 76 GLY LEU PRO ASN LEU GLN ASN GLY PRO ILE TYR ALA ARG SEQRES 2 A 76 VAL ILE GLN LYS ARG VAL PRO ASN ALA TYR ASP LYS THR SEQRES 3 A 76 ALA LEU ALA LEU GLU VAL GLY GLU LEU VAL LYS VAL THR SEQRES 4 A 76 LYS ILE ASN VAL SER GLY GLN TRP GLU GLY GLU CYS ASN SEQRES 5 A 76 GLY LYS ARG GLY HIS PHE PRO PHE THR HIS VAL ARG LEU SEQRES 6 A 76 LEU ASP GLN GLN ASN PRO ASP GLU ASP PHE SER
HELIX 1 1 PRO A 287 THR A 289 5 3
SHEET 1 A 5 LYS A 282 PHE A 286 0 SHEET 2 A 5 TRP A 275 CYS A 279 -1 N CYS A 279 O LYS A 282 SHEET 3 A 5 GLU A 262 LYS A 268 -1 N LYS A 265 O GLU A 278 SHEET 4 A 5 ILE A 238 VAL A 242 -1 N ALA A 240 O VAL A 264 SHEET 5 A 5 VAL A 291 LEU A 294 -1 O LEU A 294 N TYR A 239
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000