10 20 30 40 50 60 70 80 2GDT - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER VIRAL PROTEIN, HYDROLASE 17-MAR-06 2GDT
TITLE NMR STRUCTURE OF THE NONSTRUCTURAL PROTEIN 1 (NSP1) FROM TITLE 2 THE SARS CORONAVIRUS
COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEADER PROTEIN; P65 HOMOLOG; NSP1 (EC 3.4.22.-); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: NSP1-6; COMPND 5 EC: 3.4.22.-; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SARS CORONAVIRUS; SOURCE 3 ORGANISM_TAXID: 227859; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PSTEF
KEYWDS LEADER PROTEIN, NMR, BETA-BARREL, ALPHA-BETA, VIRUS, KEYWDS 2 REPLICASE, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 4 VIRAL PROTEIN, HYDROLASE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.S.ALMEIDA,T.HERRMANN,M.GERALT,M.A.JOHNSON,K.SAIKATENDU, AUTHOR 2 J.JOSEPH,R.C.SUBRAMANIAN,B.W.NEUMAN,M.J.BUCHMEIER, AUTHOR 3 R.C.STEVENS,P.KUHN,I.A.WILSON,K.WUTHRICH,JOINT CENTER FOR AUTHOR 4 STRUCTURAL GENOMICS (JCSG)
REVDAT 4 24-FEB-09 2GDT 1 VERSN REVDAT 3 20-NOV-07 2GDT 1 JRNL REVDAT 2 13-MAR-07 2GDT 1 REVDAT 1 06-FEB-07 2GDT 0
JRNL AUTH M.S.ALMEIDA,M.A.JOHNSON,T.HERRMANN,M.GERALT, JRNL AUTH 2 K.WUTHRICH JRNL TITL NOVEL BETA-BARREL FOLD IN THE NUCLEAR MAGNETIC JRNL TITL 2 RESONANCE STRUCTURE OF THE REPLICASE NONSTRUCTURAL JRNL TITL 3 PROTEIN 1 FROM THE SEVERE ACUTE RESPIRATORY JRNL TITL 4 SYNDROME CORONAVIRUS. JRNL REF J.VIROL. V. 81 3151 2007 JRNL REFN ISSN 0022-538X JRNL PMID 17202208 JRNL DOI 10.1128/JVI.01939-06
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : OPALP - REMARK 3 AUTHORS : LUGINBUHL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MOLECULAR DYNAMICS USING CYANA REMARK 3 1.0.3. ENERGY MINIMIZATION IN A WATER SHELL USING OPALP WITH REMARK 3 AMBER FORCE FIELD.
REMARK 4 REMARK 4 2GDT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-06. REMARK 100 THE RCSB ID CODE IS RCSB036994.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 25 MM SODIUM PHOSPHATE AND REMARK 210 250 MM NACL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 2 MM NSP1-6; 25 MM REMARK 210 NAPHOSPHATE PH 7.0, 250 MM REMARK 210 NACL, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 1.3, ATNOS/CANDID REMARK 210 STANDALONE, CYANA 1.0.3 REMARK 210 METHOD USED : ATNOS/CANDID/CYANA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 120 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 3 ARG A 88 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 4 VAL A 95 CA - CB - CG1 ANGL. DEV. = 15.7 DEGREES REMARK 500 5 ARG A 32 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 9 ARG A 18 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 13 ARG A 18 CD - NE - CZ ANGL. DEV. = 9.2 DEGREES REMARK 500 14 ARG A 32 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 17 ARG A 13 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 18 ARG A 113 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 2 162.14 64.80 REMARK 500 1 VAL A 15 65.02 -65.36 REMARK 500 1 THR A 39 38.89 -94.41 REMARK 500 1 PRO A 51 43.86 -84.37 REMARK 500 1 GLN A 52 -17.49 -142.28 REMARK 500 1 GLU A 54 -88.37 -82.49 REMARK 500 1 GLN A 55 -59.65 -156.39 REMARK 500 1 SER A 63 78.89 43.01 REMARK 500 1 ALA A 65 18.65 -163.42 REMARK 500 1 SER A 67 82.02 -150.71 REMARK 500 1 MET A 81 -72.20 -78.48 REMARK 500 1 TYR A 86 -70.71 65.38 REMARK 500 1 ILE A 91 -93.25 -65.69 REMARK 500 1 THR A 92 116.45 21.61 REMARK 500 1 THR A 103 101.99 69.17 REMARK 500 2 HIS A 2 165.59 62.21 REMARK 500 2 ASP A 22 -18.48 66.78 REMARK 500 2 THR A 39 39.90 -89.87 REMARK 500 2 GLU A 54 -86.73 -77.82 REMARK 500 2 GLN A 55 -56.42 -158.71 REMARK 500 2 ARG A 62 47.45 -70.40 REMARK 500 2 SER A 63 -176.43 52.15 REMARK 500 2 SER A 67 76.33 -165.46 REMARK 500 2 VAL A 74 177.75 52.50 REMARK 500 2 MET A 81 -75.31 -73.09 REMARK 500 2 ILE A 84 -67.55 -28.19 REMARK 500 2 TYR A 86 -37.72 72.77 REMARK 500 2 GLU A 102 -100.38 -55.56 REMARK 500 2 THR A 103 96.89 -164.88 REMARK 500 2 ASN A 115 -88.98 -92.55 REMARK 500 3 HIS A 2 166.41 67.79 REMARK 500 3 LEU A 16 -8.45 -49.82 REMARK 500 3 ASP A 22 -39.99 -157.42 REMARK 500 3 THR A 39 41.06 -84.24 REMARK 500 3 GLU A 54 -89.20 -72.07 REMARK 500 3 GLN A 55 -62.10 -160.48 REMARK 500 3 ARG A 62 76.75 -68.47 REMARK 500 3 SER A 63 -149.61 45.29 REMARK 500 3 ASP A 64 55.11 -91.49 REMARK 500 3 THR A 68 -147.73 43.04 REMARK 500 3 LYS A 73 96.32 -49.39 REMARK 500 3 ILE A 84 -70.53 -25.60 REMARK 500 3 TYR A 86 -48.99 72.46 REMARK 500 3 ARG A 88 -133.24 58.02 REMARK 500 3 SER A 89 -173.09 65.85 REMARK 500 3 THR A 103 105.58 61.00 REMARK 500 3 ASN A 115 -76.34 -63.64 REMARK 500 4 HIS A 2 158.23 66.74 REMARK 500 4 VAL A 15 65.40 -59.61 REMARK 500 4 LEU A 16 -35.95 -36.13 REMARK 500 4 THR A 39 54.04 -90.16 REMARK 500 4 GLU A 54 -85.43 -76.54 REMARK 500 4 GLN A 55 -57.83 -169.60 REMARK 500 4 ASP A 64 28.93 -146.86 REMARK 500 4 THR A 68 -59.62 -157.36 REMARK 500 4 HIS A 72 150.13 61.73 REMARK 500 4 TYR A 86 -43.70 76.40 REMARK 500 4 VAL A 100 53.19 -112.73 REMARK 500 4 THR A 103 105.80 72.29 REMARK 500 4 ASN A 115 -72.23 -120.45 REMARK 500 5 HIS A 2 174.88 58.64 REMARK 500 5 VAL A 15 65.39 -63.14 REMARK 500 5 THR A 39 46.27 -85.99 REMARK 500 5 GLU A 54 -78.89 -72.18 REMARK 500 5 GLN A 55 -56.20 -164.64 REMARK 500 5 VAL A 58 96.19 -69.80 REMARK 500 5 SER A 63 84.62 23.93 REMARK 500 5 SER A 67 -80.94 -83.44 REMARK 500 5 HIS A 70 -75.59 -147.36 REMARK 500 5 ILE A 84 66.51 -39.82 REMARK 500 5 GLN A 85 -142.60 90.04 REMARK 500 5 TYR A 86 -81.06 60.06 REMARK 500 5 ILE A 91 -42.68 -178.38 REMARK 500 5 THR A 103 100.86 76.31 REMARK 500 5 ASN A 115 -88.57 -88.57 REMARK 500 6 HIS A 2 169.93 81.98 REMARK 500 6 VAL A 15 63.41 -68.33 REMARK 500 6 LEU A 16 -33.81 -34.88 REMARK 500 6 GLU A 54 -87.06 -74.69 REMARK 500 6 GLN A 55 -51.60 -168.44 REMARK 500 6 SER A 63 -131.82 38.40 REMARK 500 6 ALA A 65 76.71 52.13 REMARK 500 6 HIS A 72 87.21 -67.45 REMARK 500 6 LYS A 73 74.94 40.39 REMARK 500 6 ILE A 84 65.66 -48.44 REMARK 500 6 GLN A 85 -86.11 96.19 REMARK 500 6 TYR A 86 -85.42 23.18 REMARK 500 6 ARG A 88 47.22 -107.95 REMARK 500 6 LEU A 93 -60.31 -95.63 REMARK 500 6 VAL A 100 57.30 -115.49 REMARK 500 6 GLU A 102 -101.50 -75.23 REMARK 500 6 THR A 103 100.93 -162.37 REMARK 500 6 LYS A 114 95.02 28.53 REMARK 500 7 GLU A 54 -90.00 -71.92 REMARK 500 7 GLN A 55 -57.40 -155.81 REMARK 500 7 ARG A 62 18.11 -67.08 REMARK 500 7 SER A 63 153.64 66.81 REMARK 500 7 LEU A 66 93.19 24.33 REMARK 500 7 HIS A 70 72.13 45.01 REMARK 500 7 HIS A 72 170.95 58.40 REMARK 500 7 LYS A 73 83.76 -69.55 REMARK 500 7 ASP A 82 -37.98 -166.84 REMARK 500 7 TYR A 86 -44.31 68.51 REMARK 500 7 ARG A 88 2.90 57.32 REMARK 500 7 GLU A 102 0.51 -66.36 REMARK 500 7 THR A 103 103.08 71.97 REMARK 500 7 ARG A 113 42.08 -77.57 REMARK 500 7 LYS A 114 -160.60 52.20 REMARK 500 7 ASN A 115 -90.73 -120.73 REMARK 500 8 VAL A 15 65.08 -62.76 REMARK 500 8 THR A 39 49.24 -95.83 REMARK 500 8 VAL A 49 -63.51 -120.45 REMARK 500 8 GLU A 54 -89.74 -71.42 REMARK 500 8 GLN A 55 -65.19 -166.00 REMARK 500 8 SER A 63 -95.94 56.67 REMARK 500 8 ALA A 65 6.38 -158.26 REMARK 500 8 THR A 68 88.84 36.47 REMARK 500 8 HIS A 70 89.07 25.18 REMARK 500 8 HIS A 72 174.14 -57.48 REMARK 500 8 LYS A 73 94.13 -68.05 REMARK 500 8 TYR A 86 -42.79 73.10 REMARK 500 8 ARG A 88 5.72 58.54 REMARK 500 8 GLU A 102 -101.35 -65.57 REMARK 500 8 THR A 103 105.68 -165.12 REMARK 500 9 HIS A 2 174.07 59.82 REMARK 500 9 VAL A 15 64.36 -66.25 REMARK 500 9 THR A 39 39.85 -83.96 REMARK 500 9 PRO A 51 42.19 -83.30 REMARK 500 9 GLN A 52 -24.94 -149.11 REMARK 500 9 GLU A 54 -81.13 -71.36 REMARK 500 9 GLN A 55 -59.44 -171.01 REMARK 500 9 ARG A 62 35.45 -75.78 REMARK 500 9 SER A 63 -55.66 65.13 REMARK 500 9 ASP A 64 14.19 57.64 REMARK 500 9 LEU A 66 -38.50 -144.22 REMARK 500 9 ASN A 69 62.26 35.07 REMARK 500 9 HIS A 70 113.04 93.75 REMARK 500 9 ILE A 84 -49.16 -25.27 REMARK 500 9 GLN A 85 -47.29 -145.99 REMARK 500 9 ARG A 88 5.62 -161.66 REMARK 500 9 GLU A 102 -101.05 -82.36 REMARK 500 10 HIS A 2 174.51 62.55 REMARK 500 10 VAL A 15 63.76 -58.59 REMARK 500 10 THR A 39 50.56 -115.76 REMARK 500 10 GLU A 54 -93.48 -74.51 REMARK 500 10 GLN A 55 -62.45 -155.74 REMARK 500 10 SER A 63 -62.43 64.96 REMARK 500 10 ASP A 64 156.78 91.73 REMARK 500 10 ALA A 65 14.09 82.62 REMARK 500 10 LEU A 66 46.34 -152.56 REMARK 500 10 SER A 67 102.97 -54.96 REMARK 500 10 TYR A 86 -55.70 72.81 REMARK 500 10 THR A 92 150.14 95.52 REMARK 500 10 THR A 103 105.80 71.21 REMARK 500 10 ASN A 115 -95.04 -120.83 REMARK 500 11 VAL A 15 65.19 -61.14 REMARK 500 11 LEU A 16 -27.70 -32.86 REMARK 500 11 ARG A 18 51.30 -105.91 REMARK 500 11 THR A 39 39.25 -142.76 REMARK 500 11 LYS A 47 -71.24 -60.65 REMARK 500 11 VAL A 49 -63.41 -102.74 REMARK 500 11 GLU A 54 -101.24 -73.82 REMARK 500 11 GLN A 55 -63.73 -151.97 REMARK 500 11 ARG A 62 46.62 -75.27 REMARK 500 11 SER A 63 169.97 54.63 REMARK 500 11 ASP A 64 15.35 -144.15 REMARK 500 11 LEU A 66 -53.00 -142.40 REMARK 500 11 SER A 67 -60.43 59.82 REMARK 500 11 LYS A 73 94.02 -57.93 REMARK 500 11 TYR A 86 -62.24 75.53 REMARK 500 11 VAL A 100 51.02 -141.99 REMARK 500 11 THR A 103 101.46 73.38 REMARK 500 12 GLU A 54 -93.56 -68.40 REMARK 500 12 GLN A 55 -65.68 -168.57 REMARK 500 12 ALA A 65 79.33 36.87 REMARK 500 12 LEU A 66 -128.01 -94.65 REMARK 500 12 SER A 67 79.55 -69.61 REMARK 500 12 ASN A 69 -57.10 -120.57 REMARK 500 12 HIS A 72 92.54 -63.59 REMARK 500 12 LYS A 73 75.82 35.35 REMARK 500 12 TYR A 86 -70.06 74.91 REMARK 500 12 VAL A 100 38.74 -93.48 REMARK 500 12 GLU A 102 -91.32 -42.41 REMARK 500 12 THR A 103 90.61 -166.33 REMARK 500 13 HIS A 2 -177.07 61.18 REMARK 500 13 VAL A 15 66.12 -68.85 REMARK 500 13 LEU A 16 -44.02 -25.07 REMARK 500 13 THR A 39 39.81 -83.94 REMARK 500 13 VAL A 49 -60.83 -100.57 REMARK 500 13 GLU A 54 -79.58 -68.34 REMARK 500 13 GLN A 55 -57.07 -167.58 REMARK 500 13 ARG A 62 68.81 -69.95 REMARK 500 13 SER A 63 -131.21 43.81 REMARK 500 13 ASP A 64 -48.34 -164.32 REMARK 500 13 THR A 68 -84.70 29.51 REMARK 500 13 HIS A 70 68.27 26.71 REMARK 500 13 HIS A 72 175.85 56.55 REMARK 500 13 TYR A 86 -61.22 67.88 REMARK 500 13 GLU A 102 1.38 -67.17 REMARK 500 13 THR A 103 96.03 68.20 REMARK 500 14 VAL A 15 63.94 -64.42 REMARK 500 14 LEU A 16 -14.70 -48.30 REMARK 500 14 PRO A 51 43.79 -84.83 REMARK 500 14 GLN A 52 -33.56 -141.39 REMARK 500 14 GLU A 54 -94.27 -66.25 REMARK 500 14 GLN A 55 -64.63 -161.45 REMARK 500 14 SER A 63 174.27 55.63 REMARK 500 14 LEU A 66 -90.57 42.98 REMARK 500 14 SER A 67 178.54 60.68 REMARK 500 14 THR A 68 178.32 46.62 REMARK 500 14 LYS A 73 100.02 -52.12 REMARK 500 14 TYR A 86 -57.37 74.58 REMARK 500 14 VAL A 100 38.93 -79.61 REMARK 500 14 GLU A 102 -100.03 -60.08 REMARK 500 14 THR A 103 87.41 -156.77 REMARK 500 14 ASN A 115 -100.41 -99.65 REMARK 500 15 HIS A 2 145.47 70.02 REMARK 500 15 VAL A 15 64.54 -61.46 REMARK 500 15 THR A 39 39.41 -86.66 REMARK 500 15 PRO A 51 43.80 -85.37 REMARK 500 15 GLN A 52 -22.26 -149.45 REMARK 500 15 GLU A 54 -93.82 -76.84 REMARK 500 15 GLN A 55 -53.80 -157.43 REMARK 500 15 VAL A 58 86.07 -57.28 REMARK 500 15 SER A 63 -116.80 49.35 REMARK 500 15 ASP A 64 -39.09 -165.15 REMARK 500 15 ASN A 69 -100.64 -121.23 REMARK 500 15 HIS A 70 64.93 -100.26 REMARK 500 15 ASP A 82 26.90 -143.99 REMARK 500 15 ILE A 84 -71.02 -25.03 REMARK 500 15 ARG A 88 -19.54 66.08 REMARK 500 15 GLU A 102 -91.95 -47.30 REMARK 500 15 THR A 103 103.76 -166.25 REMARK 500 15 ARG A 113 93.07 -63.42 REMARK 500 16 LEU A 16 -21.68 -39.27 REMARK 500 16 THR A 39 43.32 -97.28 REMARK 500 16 VAL A 49 -60.44 -103.10 REMARK 500 16 PRO A 51 1.15 -69.61 REMARK 500 16 GLU A 54 -104.64 -69.29 REMARK 500 16 GLN A 55 -64.59 -160.63 REMARK 500 16 ARG A 62 25.21 -69.18 REMARK 500 16 SER A 63 169.93 64.75 REMARK 500 16 ALA A 65 44.06 -99.37 REMARK 500 16 LEU A 66 -67.80 -146.64 REMARK 500 16 SER A 67 78.67 46.89 REMARK 500 16 TYR A 86 -73.06 79.16 REMARK 500 16 SER A 89 176.02 95.70 REMARK 500 16 GLU A 102 -100.81 -91.40 REMARK 500 16 THR A 103 85.48 -162.48 REMARK 500 17 VAL A 15 63.89 -69.88 REMARK 500 17 THR A 39 43.63 -81.58 REMARK 500 17 PRO A 51 44.13 -80.98 REMARK 500 17 GLN A 52 -12.30 -148.17 REMARK 500 17 GLU A 54 -72.25 -67.25 REMARK 500 17 GLN A 55 -50.73 -167.64 REMARK 500 17 ALA A 65 21.11 -143.18 REMARK 500 17 THR A 68 -43.80 -134.51 REMARK 500 17 HIS A 70 69.40 24.15 REMARK 500 17 ILE A 84 -68.72 -25.61 REMARK 500 17 ARG A 88 19.37 56.16 REMARK 500 17 GLU A 102 -101.07 -69.85 REMARK 500 17 THR A 103 107.89 -166.29 REMARK 500 18 VAL A 15 65.82 -56.53 REMARK 500 18 LEU A 16 -43.51 -29.46 REMARK 500 18 THR A 39 39.44 -93.81 REMARK 500 18 PRO A 51 43.57 -82.74 REMARK 500 18 GLN A 52 -19.91 -140.49 REMARK 500 18 GLU A 54 -96.11 -75.69 REMARK 500 18 GLN A 55 -54.56 -159.03 REMARK 500 18 PRO A 56 86.34 -68.54 REMARK 500 18 SER A 63 -116.34 46.23 REMARK 500 18 ASP A 64 -58.89 -150.66 REMARK 500 18 HIS A 70 73.24 42.50 REMARK 500 18 TYR A 86 -53.81 74.07 REMARK 500 18 ARG A 88 -5.37 62.88 REMARK 500 18 ILE A 91 -32.26 -155.33 REMARK 500 18 GLU A 102 0.06 -69.92 REMARK 500 18 THR A 103 116.74 69.36 REMARK 500 18 ARG A 113 30.28 -66.49 REMARK 500 18 LYS A 114 -139.65 60.93 REMARK 500 18 ASN A 115 -80.83 -93.79 REMARK 500 19 HIS A 2 171.95 60.47 REMARK 500 19 VAL A 15 64.38 -61.90 REMARK 500 19 THR A 39 39.75 -84.51 REMARK 500 19 GLU A 46 -168.18 -118.94 REMARK 500 19 PRO A 51 44.16 -83.35 REMARK 500 19 GLN A 52 -26.64 -140.72 REMARK 500 19 GLU A 54 -80.00 -70.33 REMARK 500 19 GLN A 55 -54.11 -162.12 REMARK 500 19 SER A 63 88.93 35.64 REMARK 500 19 ALA A 65 19.02 -156.26 REMARK 500 19 ASN A 69 55.57 -99.24 REMARK 500 19 TYR A 86 -47.03 71.57 REMARK 500 19 GLU A 102 -101.18 -81.50 REMARK 500 20 HIS A 2 -176.59 58.05 REMARK 500 20 VAL A 12 0.66 -69.30 REMARK 500 20 VAL A 15 67.09 -57.47 REMARK 500 20 PRO A 51 43.87 -79.56 REMARK 500 20 GLN A 52 -28.19 -143.19 REMARK 500 20 GLU A 54 -86.44 -62.19 REMARK 500 20 GLN A 55 -62.61 -161.61 REMARK 500 20 ARG A 62 38.83 -69.64 REMARK 500 20 SER A 63 -48.13 74.18 REMARK 500 20 ASP A 64 -62.58 68.30 REMARK 500 20 ALA A 65 30.17 -72.60 REMARK 500 20 LEU A 66 60.59 26.77 REMARK 500 20 SER A 67 -61.67 -24.83 REMARK 500 20 ASN A 69 -73.49 -31.97 REMARK 500 20 HIS A 72 -160.80 54.21 REMARK 500 20 LYS A 73 73.38 -66.43 REMARK 500 20 ASP A 82 13.94 48.66 REMARK 500 20 ILE A 84 -83.50 -23.20 REMARK 500 20 ARG A 88 3.52 56.08 REMARK 500 20 VAL A 100 52.46 -118.16 REMARK 500 20 GLU A 102 1.62 -61.42 REMARK 500 20 THR A 103 97.97 65.62 REMARK 500 20 ASN A 115 -52.36 -120.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 22 SER A 23 1 146.30 REMARK 500 ILE A 91 THR A 92 1 148.28 REMARK 500 ARG A 62 SER A 63 4 144.42 REMARK 500 GLY A 71 HIS A 72 4 -146.81 REMARK 500 SER A 63 ASP A 64 6 146.24 REMARK 500 ASN A 115 GLY A 116 7 142.24 REMARK 500 GLY A 90 ILE A 91 10 145.54 REMARK 500 GLY A 83 ILE A 84 15 -143.65 REMARK 500 SER A 63 ASP A 64 16 -145.43 REMARK 500 ARG A 88 SER A 89 17 146.63 REMARK 500 ASN A 115 GLY A 116 17 -144.62 REMARK 500 ASP A 82 GLY A 83 19 -146.84 REMARK 500 LYS A 114 ASN A 115 19 148.44 REMARK 500 ARG A 113 LYS A 114 20 146.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 62 0.11 SIDE_CHAIN REMARK 500 2 ARG A 62 0.10 SIDE_CHAIN REMARK 500 2 ARG A 113 0.11 SIDE_CHAIN REMARK 500 3 ARG A 113 0.08 SIDE_CHAIN REMARK 500 4 ARG A 13 0.16 SIDE_CHAIN REMARK 500 5 TYR A 57 0.07 SIDE_CHAIN REMARK 500 5 TYR A 86 0.07 SIDE_CHAIN REMARK 500 6 ARG A 88 0.08 SIDE_CHAIN REMARK 500 7 ARG A 32 0.13 SIDE_CHAIN REMARK 500 9 ARG A 62 0.12 SIDE_CHAIN REMARK 500 12 ARG A 13 0.10 SIDE_CHAIN REMARK 500 12 TYR A 86 0.07 SIDE_CHAIN REMARK 500 12 ARG A 108 0.10 SIDE_CHAIN REMARK 500 13 ARG A 13 0.08 SIDE_CHAIN REMARK 500 13 ARG A 88 0.11 SIDE_CHAIN REMARK 500 15 ARG A 13 0.08 SIDE_CHAIN REMARK 500 16 ARG A 13 0.09 SIDE_CHAIN REMARK 500 17 ARG A 18 0.12 SIDE_CHAIN REMARK 500 17 TYR A 86 0.11 SIDE_CHAIN REMARK 500 18 ARG A 13 0.13 SIDE_CHAIN REMARK 500 18 ARG A 32 0.09 SIDE_CHAIN REMARK 500 18 ARG A 88 0.07 SIDE_CHAIN REMARK 500 19 ARG A 13 0.10 SIDE_CHAIN REMARK 500 20 ARG A 18 0.10 SIDE_CHAIN REMARK 500 20 ARG A 32 0.09 SIDE_CHAIN REMARK 500 20 ARG A 62 0.12 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7014 RELATED DB: BMRB REMARK 900 CHEMICAL SHIFTS
DBREF 2GDT A 1 116 UNP P59641 R1AB_CVHSA 12 127
SEQADV 2GDT GLY A 1 UNP P59641 THR 12 ENGINEERED
SEQRES 1 A 116 GLY HIS VAL GLN LEU SER LEU PRO VAL LEU GLN VAL ARG SEQRES 2 A 116 ASP VAL LEU VAL ARG GLY PHE GLY ASP SER VAL GLU GLU SEQRES 3 A 116 ALA LEU SER GLU ALA ARG GLU HIS LEU LYS ASN GLY THR SEQRES 4 A 116 CYS GLY LEU VAL GLU LEU GLU LYS GLY VAL LEU PRO GLN SEQRES 5 A 116 LEU GLU GLN PRO TYR VAL PHE ILE LYS ARG SER ASP ALA SEQRES 6 A 116 LEU SER THR ASN HIS GLY HIS LYS VAL VAL GLU LEU VAL SEQRES 7 A 116 ALA GLU MET ASP GLY ILE GLN TYR GLY ARG SER GLY ILE SEQRES 8 A 116 THR LEU GLY VAL LEU VAL PRO HIS VAL GLY GLU THR PRO SEQRES 9 A 116 ILE ALA TYR ARG ASN VAL LEU LEU ARG LYS ASN GLY
HELIX 1 1 SER A 23 GLY A 38 1 16 HELIX 2 2 VAL A 49 LEU A 53 5 5
SHEET 1 A 2 VAL A 3 VAL A 9 0 SHEET 2 A 2 ALA A 106 LEU A 112 -1 O ARG A 108 N LEU A 7 SHEET 1 B 4 CYS A 40 VAL A 43 0 SHEET 2 B 4 GLY A 94 PRO A 98 -1 O VAL A 95 N VAL A 43 SHEET 3 B 4 TYR A 57 LYS A 61 -1 N VAL A 58 O LEU A 96 SHEET 4 B 4 GLU A 76 GLU A 80 -1 O VAL A 78 N PHE A 59
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000