10 20 30 40 50 60 70 80 2FMR - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA-BINDING PROTEIN 06-OCT-97 2FMR
TITLE KH1 FROM THE FRAGILE X PROTEIN FMR1, NMR, 18 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: FMR1 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIRST KH DOMAIN RESIDUES 216 - 280; COMPND 5 SYNONYM: KH1; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: MODULE FROM THE KH FAMILY
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL_LINE: BL21; SOURCE 6 CELLULAR_LOCATION: CYTOPLASM; SOURCE 7 GENE: FMR1; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET9; SOURCE 13 OTHER_DETAILS: HUMAN CDNA SEQUENCE CODING THE FIRST DOMAIN SOURCE 14 OF FMR WAS PCR AMPLIFIED AND SUB-CLONED INTO A PET9 SOURCE 15 DERIVED PLASMID VECTOR WITH C-TERMINAL HIS-TAG
KEYWDS FMR1, FRAGILE X, MODULAR PROTEINS, RNA-BINDING PROTEIN, NMR
EXPDTA SOLUTION NMR
NUMMDL 18
AUTHOR G.MUSCO,A.KHARRAT,G.STIER,F.FRATERNALI,T.J.GIBSON,M.NILGES, AUTHOR 2 A.PASTORE
REVDAT 2 24-FEB-09 2FMR 1 VERSN REVDAT 1 08-APR-98 2FMR 0
JRNL AUTH G.MUSCO,A.KHARRAT,G.STIER,F.FRATERNALI,T.J.GIBSON, JRNL AUTH 2 M.NILGES,A.PASTORE JRNL TITL THE SOLUTION STRUCTURE OF THE FIRST KH DOMAIN OF JRNL TITL 2 FMR1, THE PROTEIN RESPONSIBLE FOR THE FRAGILE X JRNL TITL 3 SYNDROME. JRNL REF NAT.STRUCT.BIOL. V. 4 712 1997 JRNL REFN ISSN 1072-8368 JRNL PMID 9302998 JRNL DOI 10.1038/NSB0997-712
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT DETAILS CAN BE FOUND IN REMARK 3 THE JNRL CITATION. ARIA (NILGES) ALSO WAS USED.
REMARK 4 REMARK 4 2FMR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.1 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : TOCSY, NOESY, NOESY HSQC, REMARK 210 HMQC-J REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR, ARIA REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 18 REMARK 210 CONFORMERS, SELECTION CRITERIA : ENERGY, RMS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 19 105.64 -58.35 REMARK 500 1 THR A 21 -164.71 59.18 REMARK 500 1 CYS A 45 49.65 70.57 REMARK 500 2 LEU A 14 40.88 -105.27 REMARK 500 2 LEU A 17 53.76 -90.55 REMARK 500 2 THR A 21 -59.52 -151.35 REMARK 500 2 HIS A 22 -172.36 -57.88 REMARK 500 2 ASN A 25 -86.04 -78.23 REMARK 500 2 GLU A 42 43.62 -96.41 REMARK 500 2 ASP A 43 -50.84 -128.74 REMARK 500 2 CYS A 45 80.88 49.45 REMARK 500 3 LEU A 17 103.85 177.59 REMARK 500 3 ILE A 19 -60.62 -98.62 REMARK 500 3 ALA A 24 60.87 74.18 REMARK 500 3 CYS A 45 77.48 64.64 REMARK 500 3 GLU A 52 30.51 -98.57 REMARK 500 3 ASP A 53 126.91 -175.34 REMARK 500 4 ALA A 24 38.44 -144.83 REMARK 500 4 ALA A 37 148.07 -174.57 REMARK 500 4 ASP A 53 114.01 -160.55 REMARK 500 5 LEU A 17 -69.43 -90.76 REMARK 500 5 ALA A 18 -69.82 66.66 REMARK 500 5 CYS A 45 80.17 50.21 REMARK 500 5 LEU A 64 -76.61 -62.55 REMARK 500 6 SER A 2 176.43 -53.11 REMARK 500 6 VAL A 10 72.61 -155.04 REMARK 500 6 ARG A 11 -168.28 43.90 REMARK 500 6 HIS A 22 -75.92 177.51 REMARK 500 6 ALA A 24 133.89 65.63 REMARK 500 6 VAL A 35 172.53 -55.44 REMARK 500 6 CYS A 45 84.89 56.26 REMARK 500 6 THR A 46 -169.95 -172.49 REMARK 500 7 SER A 2 92.94 50.13 REMARK 500 7 VAL A 35 83.19 -58.56 REMARK 500 7 ALA A 37 144.56 178.06 REMARK 500 7 GLU A 42 -49.39 -130.51 REMARK 500 7 CYS A 45 81.84 62.05 REMARK 500 7 LEU A 64 61.54 -107.06 REMARK 500 8 PHE A 8 132.36 -175.74 REMARK 500 8 ILE A 9 170.06 -59.21 REMARK 500 8 ILE A 19 92.73 45.44 REMARK 500 8 HIS A 22 89.17 57.62 REMARK 500 8 GLU A 42 55.33 -99.14 REMARK 500 8 ASP A 43 -68.99 -143.24 REMARK 500 8 CYS A 45 85.28 46.48 REMARK 500 8 ASP A 53 119.68 -173.42 REMARK 500 8 LEU A 64 35.42 -97.23 REMARK 500 9 SER A 2 -163.13 64.08 REMARK 500 9 ARG A 3 -35.30 -166.74 REMARK 500 9 ALA A 18 149.65 -171.49 REMARK 500 9 ASP A 53 108.82 -170.76 REMARK 500 10 ARG A 3 -25.50 88.65 REMARK 500 10 LEU A 17 -73.77 -149.28 REMARK 500 10 ALA A 18 -86.32 55.55 REMARK 500 10 THR A 21 -50.93 -130.29 REMARK 500 10 VAL A 35 100.10 -58.67 REMARK 500 10 GLU A 42 44.29 -106.99 REMARK 500 10 ASP A 43 -62.08 -139.09 REMARK 500 10 LEU A 64 -79.92 -51.67 REMARK 500 11 ARG A 3 -39.78 -130.79 REMARK 500 11 MET A 15 -69.19 -105.37 REMARK 500 11 ALA A 18 68.42 62.21 REMARK 500 11 HIS A 22 81.23 65.24 REMARK 500 11 VAL A 35 89.41 -58.95 REMARK 500 11 ALA A 37 166.89 178.11 REMARK 500 11 CYS A 45 86.17 42.97 REMARK 500 12 MET A 15 -66.31 -101.19 REMARK 500 12 THR A 21 -72.95 -104.23 REMARK 500 12 VAL A 35 109.57 -56.50 REMARK 500 12 CYS A 45 92.43 47.72 REMARK 500 12 LEU A 64 47.81 -94.49 REMARK 500 13 SER A 2 -75.08 -110.42 REMARK 500 13 ARG A 3 -45.62 168.41 REMARK 500 13 MET A 15 -75.56 -47.36 REMARK 500 13 LEU A 17 -51.15 -142.88 REMARK 500 13 HIS A 22 35.27 -160.96 REMARK 500 13 VAL A 35 102.82 -55.31 REMARK 500 13 GLU A 42 -61.43 -93.77 REMARK 500 13 CYS A 45 102.38 -42.19 REMARK 500 14 ARG A 11 -170.20 -66.86 REMARK 500 14 CYS A 45 81.80 50.08 REMARK 500 14 LEU A 64 -77.63 -95.42 REMARK 500 15 LEU A 17 103.85 56.86 REMARK 500 15 ALA A 18 101.50 -174.06 REMARK 500 15 ALA A 24 74.28 -107.20 REMARK 500 15 CYS A 45 78.28 46.83 REMARK 500 15 LEU A 64 32.75 -94.97 REMARK 500 16 ILE A 19 53.84 -91.76 REMARK 500 16 THR A 21 -171.51 58.45 REMARK 500 16 ALA A 24 44.45 -95.38 REMARK 500 16 VAL A 35 89.54 -57.19 REMARK 500 16 CYS A 45 71.94 71.90 REMARK 500 17 LEU A 17 69.03 66.88 REMARK 500 17 GLU A 42 -76.36 -61.38 REMARK 500 17 ASP A 43 -75.66 -47.87 REMARK 500 17 THR A 44 81.02 -63.10 REMARK 500 17 CYS A 45 90.08 -48.82 REMARK 500 18 ARG A 3 -66.36 67.36 REMARK 500 18 LEU A 14 49.90 -98.36 REMARK 500 18 MET A 15 -67.55 -94.44 REMARK 500 18 THR A 21 -68.12 -128.47 REMARK 500 18 HIS A 22 64.87 -176.73 REMARK 500 18 ALA A 24 27.99 -163.36 REMARK 500 18 ALA A 37 161.79 176.98 REMARK 500 18 GLU A 42 -62.60 -91.36 REMARK 500 18 CYS A 45 92.22 -49.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 3 0.23 SIDE_CHAIN REMARK 500 1 ARG A 11 0.18 SIDE_CHAIN REMARK 500 1 ARG A 30 0.24 SIDE_CHAIN REMARK 500 1 ARG A 61 0.28 SIDE_CHAIN REMARK 500 2 ARG A 3 0.30 SIDE_CHAIN REMARK 500 2 ARG A 11 0.21 SIDE_CHAIN REMARK 500 2 ARG A 30 0.12 SIDE_CHAIN REMARK 500 2 ARG A 61 0.29 SIDE_CHAIN REMARK 500 3 ARG A 3 0.29 SIDE_CHAIN REMARK 500 3 ARG A 11 0.25 SIDE_CHAIN REMARK 500 3 ARG A 30 0.23 SIDE_CHAIN REMARK 500 3 ARG A 61 0.24 SIDE_CHAIN REMARK 500 4 ARG A 3 0.15 SIDE_CHAIN REMARK 500 4 ARG A 11 0.26 SIDE_CHAIN REMARK 500 4 ARG A 30 0.19 SIDE_CHAIN REMARK 500 4 ARG A 61 0.24 SIDE_CHAIN REMARK 500 5 ARG A 3 0.29 SIDE_CHAIN REMARK 500 5 ARG A 11 0.18 SIDE_CHAIN REMARK 500 5 ARG A 30 0.30 SIDE_CHAIN REMARK 500 5 ARG A 61 0.27 SIDE_CHAIN REMARK 500 6 ARG A 3 0.26 SIDE_CHAIN REMARK 500 6 ARG A 11 0.14 SIDE_CHAIN REMARK 500 6 ARG A 30 0.30 SIDE_CHAIN REMARK 500 7 ARG A 3 0.29 SIDE_CHAIN REMARK 500 7 ARG A 11 0.30 SIDE_CHAIN REMARK 500 7 ARG A 30 0.30 SIDE_CHAIN REMARK 500 7 ARG A 61 0.31 SIDE_CHAIN REMARK 500 8 ARG A 3 0.25 SIDE_CHAIN REMARK 500 8 ARG A 11 0.28 SIDE_CHAIN REMARK 500 8 ARG A 30 0.31 SIDE_CHAIN REMARK 500 8 ARG A 61 0.27 SIDE_CHAIN REMARK 500 9 ARG A 3 0.28 SIDE_CHAIN REMARK 500 9 ARG A 11 0.24 SIDE_CHAIN REMARK 500 9 ARG A 30 0.29 SIDE_CHAIN REMARK 500 9 ARG A 61 0.23 SIDE_CHAIN REMARK 500 10 ARG A 3 0.08 SIDE_CHAIN REMARK 500 10 ARG A 11 0.28 SIDE_CHAIN REMARK 500 10 ARG A 30 0.24 SIDE_CHAIN REMARK 500 10 ARG A 61 0.26 SIDE_CHAIN REMARK 500 11 ARG A 3 0.31 SIDE_CHAIN REMARK 500 11 ARG A 11 0.16 SIDE_CHAIN REMARK 500 11 ARG A 30 0.19 SIDE_CHAIN REMARK 500 11 ARG A 61 0.31 SIDE_CHAIN REMARK 500 12 ARG A 3 0.21 SIDE_CHAIN REMARK 500 12 ARG A 11 0.29 SIDE_CHAIN REMARK 500 12 ARG A 30 0.31 SIDE_CHAIN REMARK 500 12 ARG A 61 0.25 SIDE_CHAIN REMARK 500 13 ARG A 3 0.30 SIDE_CHAIN REMARK 500 13 ARG A 11 0.23 SIDE_CHAIN REMARK 500 13 ARG A 30 0.09 SIDE_CHAIN REMARK 500 13 ARG A 61 0.31 SIDE_CHAIN REMARK 500 14 ARG A 3 0.27 SIDE_CHAIN REMARK 500 14 ARG A 11 0.20 SIDE_CHAIN REMARK 500 14 ARG A 30 0.24 SIDE_CHAIN REMARK 500 14 ARG A 61 0.31 SIDE_CHAIN REMARK 500 15 ARG A 3 0.30 SIDE_CHAIN REMARK 500 15 ARG A 11 0.20 SIDE_CHAIN REMARK 500 15 ARG A 30 0.30 SIDE_CHAIN REMARK 500 15 ARG A 61 0.14 SIDE_CHAIN REMARK 500 16 ARG A 3 0.30 SIDE_CHAIN REMARK 500 16 ARG A 11 0.29 SIDE_CHAIN REMARK 500 16 ARG A 30 0.12 SIDE_CHAIN REMARK 500 16 ARG A 61 0.19 SIDE_CHAIN REMARK 500 17 ARG A 3 0.30 SIDE_CHAIN REMARK 500 17 ARG A 11 0.29 SIDE_CHAIN REMARK 500 17 ARG A 30 0.19 SIDE_CHAIN REMARK 500 17 ARG A 61 0.23 SIDE_CHAIN REMARK 500 18 ARG A 3 0.26 SIDE_CHAIN REMARK 500 18 ARG A 11 0.28 SIDE_CHAIN REMARK 500 18 ARG A 30 0.30 SIDE_CHAIN REMARK 500 18 ARG A 61 0.15 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
DBREF 2FMR A 1 65 UNP Q06787 FMR1_HUMAN 216 280
SEQRES 1 A 65 ALA SER ARG PHE HIS GLU GLN PHE ILE VAL ARG GLU ASP SEQRES 2 A 65 LEU MET GLY LEU ALA ILE GLY THR HIS GLY ALA ASN ILE SEQRES 3 A 65 GLN GLN ALA ARG LYS VAL PRO GLY VAL THR ALA ILE ASP SEQRES 4 A 65 LEU ASP GLU ASP THR CYS THR PHE HIS ILE TYR GLY GLU SEQRES 5 A 65 ASP GLN ASP ALA VAL LYS LYS ALA ARG SER PHE LEU GLU
HELIX 1 1 ASN A 25 LYS A 31 1 7 HELIX 2 2 GLN A 54 PHE A 63 1 10
SHEET 1 A 3 PHE A 4 PHE A 8 0 SHEET 2 A 3 THR A 46 GLY A 51 -1 N GLY A 51 O PHE A 4 SHEET 3 A 3 VAL A 35 ASP A 41 -1 N ASP A 41 O THR A 46
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000