10 20 30 40 50 60 70 80 2EZA - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER PHOSPHOTRANSFERASE 07-MAY-97 2EZA
TITLE AMINO TERMINAL DOMAIN OF ENZYME I FROM ESCHERICHIA COLI, TITLE 2 NMR, RESTRAINED REGULARIZED MEAN STRUCTURE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOTRANSFERASE SYSTEM, ENZYME I; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: AMINO-TERMINAL DOMAIN RESIDUES 1 - 259; COMPND 5 EC: 2.7.3.9; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: GI698; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PLP2
KEYWDS PHOSPHOTRANSFERASE, TRANSFERASE, KINASE, SUGAR TRANSPORT
EXPDTA SOLUTION NMR
AUTHOR G.M.CLORE,N.TJANDRA,D.S.GARRETT,A.M.GRONENBORN
REVDAT 2 24-FEB-09 2EZA 1 VERSN REVDAT 1 20-AUG-97 2EZA 0
JRNL AUTH N.TJANDRA,D.S.GARRETT,A.M.GRONENBORN,A.BAX, JRNL AUTH 2 G.M.CLORE JRNL TITL DEFINING LONG RANGE ORDER IN NMR STRUCTURE JRNL TITL 2 DETERMINATION FROM THE DEPENDENCE OF HETERONUCLEAR JRNL TITL 3 RELAXATION TIMES ON ROTATIONAL DIFFUSION JRNL TITL 4 ANISOTROPY. JRNL REF NAT.STRUCT.BIOL. V. 4 443 1997 JRNL REFN ISSN 1072-8368 JRNL PMID 9187651 JRNL DOI 10.1038/NSB0697-443
REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.S.GARRETT,Y.J.SEOK,D.I.LIAO,A.PETERKOFSKY, REMARK 1 AUTH 2 A.M.GRONENBORN,G.M.CLORE REMARK 1 TITL SOLUTION STRUCTURE OF THE 30 KDA N-TERMINAL DOMAIN REMARK 1 TITL 2 OF ENZYME I OF THE ESCHERICHIA COLI REMARK 1 TITL 3 PHOSPHOENOLPYRUVATE:SUGAR PHOSPHOTRANSFERASE REMARK 1 TITL 4 SYSTEM BY MULTIDIMENSIONAL NMR REMARK 1 REF BIOCHEMISTRY V. 36 2517 1997 REMARK 1 REFN ISSN 0006-2960
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE STRUCTURES WERE CALCULATED USING THE SIMULATED REMARK 3 ANNEALING PROTOCOL OF NILGES ET AL. (1988) FEBS LETT. 229, REMARK 3 129-136 USING THE PROGRAM X-PLOR 3.1 (BRUNGER) MODIFIED TO REMARK 3 INCORPORATE COUPLING CONSTANT (GARRETT ET AL. (1984) J. REMARK 3 MAGN. RESON. SERIES B 104, 99-103) AND CARBON CHEMICAL REMARK 3 SHIFT (KUSZEWSKI ET AL. (1995) J. MAGN. RESON. SERIES B REMARK 3 106, 92-96) RESTRAINTS, AND T1/T2 RESTRAINTS REMARK 3 (TJANDRA ET AL. NATURE STRUCT. BIOL. 4, 443-449, 1997). REMARK 3 REMARK 3 IN THIS ENTRY THE LAST COLUMN REPRESENTS THE AVERAGE RMS REMARK 3 DIFFERENCE BETWEEN THE INDIVIDUAL SIMULATED ANNEALING REMARK 3 STRUCTURES AND THE MEAN COORDINATE POSITIONS. THE LAST REMARK 3 COLUMN IN THE INDIVIDUAL SA STRUCTURES HAS NO MEANING. REMARK 3 BEST FITTING TO GENERATE THE AVERAGE STRUCTURE IS WITH REMARK 3 RESPECT TO RESIDUES 1 - 246 (RESIDUES 250 - 259 ARE REMARK 3 DISORDERED IN SOLUTION). REMARK 3 REMARK 3 THE DIFFUSION AXIS IS REPRESENTED BY A LINE CONNECTING THE REMARK 3 FOLLOWING POINTS: REMARK 3 P1 99.732 -1.172 2.902 REMARK 3 P2 101.246 -1.242 3.113
REMARK 4 REMARK 4 2EZA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 600 MHZ REMARK 210 SPECTROMETER MODEL : AMX500, AMX600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR (SEE ABOVE) ABOVE) REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : REGULARIZED MEAN STRUCTURE REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: THE 3D STRUCTURE OF THE EIN WAS SOLVED BY MULTI- REMARK 210 DIMENSIONAL HETERONUCLEAR NMR AND IS BASED ON 4369 REMARK 210 EXPERIMENTAL NMR RESTRAINTS: 117 T1/T2 RESTRAINTS; 952 REMARK 210 SEQUENTIAL (|I- J|=1), 809 MEDIUM RANGE (1 < |I-J| <=5) AND REMARK 210 586 LONG RANGE (|I-J| >5) INTERRESIDUES AND 471 INTRARESIDUE REMARK 210 APPROXIMATE INTERPROTON DISTANCE RESTRAINTS; 230 DISTANCES FOR REMARK 210 115 BACKBONE HYDROGEN BONDS; 543 TORSION ANGLE RESTRAINTS; 163 REMARK 210 THREE-BOND HN-HA COUPLING CONSTANT RESTRAINTS; AND 498 (257 REMARK 210 CALPHA AND 241 CBETA) 13C SHIFT. RESTRAINTS. (NUMBERS OF REMARK 210 RESIDUES 1 - 259)
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 2 93.42 -61.18 REMARK 500 LEU A 6 109.08 58.83 REMARK 500 GLU A 68 -15.18 -46.40 REMARK 500 ASP A 119 56.07 -97.41 REMARK 500 LEU A 144 156.13 -49.93 REMARK 500 ASP A 182 50.28 -94.55 REMARK 500 GLU A 198 6.74 52.66 REMARK 500 VAL A 203 -31.29 -139.30 REMARK 500 ASP A 215 -13.37 72.84 REMARK 500 ALA A 222 20.55 41.15 REMARK 500 ASN A 230 70.17 53.47 REMARK 500 LEU A 256 39.16 -73.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 259 0.10 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2EZB RELATED DB: PDB REMARK 900 MODELS 1 - 14 OF 28 REMARK 900 RELATED ID: 2EZC RELATED DB: PDB REMARK 900 MODELS 15 - 28 OF 28
DBREF 2EZA A 1 258 UNP P08839 PT1_ECOLI 1 258
SEQRES 1 A 259 MET ILE SER GLY ILE LEU ALA SER PRO GLY ILE ALA PHE SEQRES 2 A 259 GLY LYS ALA LEU LEU LEU LYS GLU ASP GLU ILE VAL ILE SEQRES 3 A 259 ASP ARG LYS LYS ILE SER ALA ASP GLN VAL ASP GLN GLU SEQRES 4 A 259 VAL GLU ARG PHE LEU SER GLY ARG ALA LYS ALA SER ALA SEQRES 5 A 259 GLN LEU GLU THR ILE LYS THR LYS ALA GLY GLU THR PHE SEQRES 6 A 259 GLY GLU GLU LYS GLU ALA ILE PHE GLU GLY HIS ILE MET SEQRES 7 A 259 LEU LEU GLU ASP GLU GLU LEU GLU GLN GLU ILE ILE ALA SEQRES 8 A 259 LEU ILE LYS ASP LYS HIS MET THR ALA ASP ALA ALA ALA SEQRES 9 A 259 HIS GLU VAL ILE GLU GLY GLN ALA SER ALA LEU GLU GLU SEQRES 10 A 259 LEU ASP ASP GLU TYR LEU LYS GLU ARG ALA ALA ASP VAL SEQRES 11 A 259 ARG ASP ILE GLY LYS ARG LEU LEU ARG ASN ILE LEU GLY SEQRES 12 A 259 LEU LYS ILE ILE ASP LEU SER ALA ILE GLN ASP GLU VAL SEQRES 13 A 259 ILE LEU VAL ALA ALA ASP LEU THR PRO SER GLU THR ALA SEQRES 14 A 259 GLN LEU ASN LEU LYS LYS VAL LEU GLY PHE ILE THR ASP SEQRES 15 A 259 ALA GLY GLY ARG THR SER HIS THR SER ILE MET ALA ARG SEQRES 16 A 259 SER LEU GLU LEU PRO ALA ILE VAL GLY THR GLY SER VAL SEQRES 17 A 259 THR SER GLN VAL LYS ASN ASP ASP TYR LEU ILE LEU ASP SEQRES 18 A 259 ALA VAL ASN ASN GLN VAL TYR VAL ASN PRO THR ASN GLU SEQRES 19 A 259 VAL ILE ASP LYS MET ARG ALA VAL GLN GLU GLN VAL ALA SEQRES 20 A 259 SER GLU LYS ALA GLU LEU ALA LYS LEU LYS ASP ARG
HELIX 1 1 ALA A 33 THR A 64 1 32 HELIX 2 2 GLU A 67 LEU A 80 5 14 HELIX 3 3 GLU A 83 ASP A 95 1 13 HELIX 4 4 ALA A 100 GLU A 117 1 18 HELIX 5 5 GLU A 121 ILE A 141 1 21 HELIX 6 6 LEU A 149 ALA A 151 5 3 HELIX 7 7 PRO A 165 GLN A 170 1 6 HELIX 8 8 HIS A 189 SER A 196 1 8 HELIX 9 9 VAL A 208 SER A 210 5 3 HELIX 10 10 ASN A 233 ALA A 254 1 22
SHEET 1 A 3 ALA A 12 LYS A 15 0 SHEET 2 A 3 TYR A 217 LEU A 220 -1 N LEU A 220 O ALA A 12 SHEET 3 A 3 VAL A 227 VAL A 229 -1 N TYR A 228 O ILE A 219 SHEET 1 B 3 ALA A 16 LEU A 18 0 SHEET 2 B 3 ILE A 157 ALA A 160 1 N ILE A 157 O LEU A 17 SHEET 3 B 3 PHE A 179 THR A 181 1 N ILE A 180 O LEU A 158
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000