10 20 30 40 50 60 70 80 2ERG - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION ACTIVATOR/DNA 24-OCT-05 2ERG
TITLE CRYSTAL STRUCTURE OF LEU3 DNA-BINDING DOMAIN WITH A SINGLE TITLE 2 H50C MUTATION COMPLEXED WITH A 15MER DNA DUPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'- COMPND 3 D(*TP*TP*GP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*CP*A)-3'; COMPND 4 CHAIN: C, D; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: REGULATORY PROTEIN LEU3; COMPND 8 CHAIN: A, B; COMPND 9 FRAGMENT: RESIDUES 32-103; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 5 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 6 ORGANISM_TAXID: 4932; SOURCE 7 GENE: LEU3; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PT7-7
KEYWDS ZN(2)CYS(6) BINUCLEAR CLUSTER MOTIF, TRANSCRIPTION KEYWDS 2 ACTIVATOR/DNA COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR M.X.FITZGERALD,R.MARMORSTEIN
REVDAT 3 24-FEB-09 2ERG 1 VERSN REVDAT 2 18-APR-06 2ERG 1 JRNL REVDAT 1 04-APR-06 2ERG 0
JRNL AUTH M.X.FITZGERALD,J.R.ROJAS,J.M.KIM,G.B.KOHLHAW, JRNL AUTH 2 R.MARMORSTEIN JRNL TITL STRUCTURE OF A LEU3-DNA COMPLEX: RECOGNITION OF JRNL TITL 2 EVERTED CGG HALF-SITES BY A ZN2CYS6 BINUCLEAR JRNL TITL 3 CLUSTER PROTEIN. JRNL REF STRUCTURE V. 14 725 2006 JRNL REFN ISSN 0969-2126 JRNL PMID 16615914 JRNL DOI 10.1016/J.STR.2005.11.025
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 3218987.680 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 5393 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.273 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.500 REMARK 3 FREE R VALUE TEST SET COUNT : 565 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.012 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.35 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 810 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 93 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.033 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 918 REMARK 3 NUCLEIC ACID ATOMS : 608 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 13 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 24.19000 REMARK 3 B22 (A**2) : 24.19000 REMARK 3 B33 (A**2) : -48.37000 REMARK 3 B12 (A**2) : 18.44000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM SIGMAA (A) : 0.55 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.47 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.61 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.30 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.06 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.41 REMARK 3 BSOL : 300.00 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED
REMARK 4 REMARK 4 2ERG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-NOV-05. REMARK 100 THE RCSB ID CODE IS RCSB035004.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-00 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9213 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5419 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 42.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.15300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2ERE REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MES, 3% V/V ISOPROPANOL, 20 REMARK 280 MM MG(OAC)2, PH 6.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.83000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.91500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 81.83000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.91500 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ASYMMETRIC UNIT CONTAINS ONE BIOLOGICAL UNIT OF A LEU3 REMARK 300 HOMODIMER BOUND TO DNA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 32 REMARK 465 ARG A 33 REMARK 465 LYS A 34 REMARK 465 THR A 100 REMARK 465 SER A 101 REMARK 465 ASP A 102 REMARK 465 GLU A 103 REMARK 465 LYS B 32 REMARK 465 ARG B 33 REMARK 465 LYS B 34 REMARK 465 THR B 100 REMARK 465 SER B 101 REMARK 465 ASP B 102 REMARK 465 GLU B 103
REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS(M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 ASP A 48 CG OD1 OD2 REMARK 470 CYS A 50 SG REMARK 470 ARG A 52 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 54 CB CG CD REMARK 470 GLU A 55 CG CD OE1 OE2 REMARK 470 LYS A 59 CG CD CE NZ REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 ILE A 68 CG1 CG2 CD1 REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 ARG A 71 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 LEU A 92 CG CD1 CD2 REMARK 470 ARG A 94 CG CD NE CZ NH1 NH2 REMARK 470 THR A 95 OG1 CG2 REMARK 470 LEU A 96 CG CD1 CD2 REMARK 470 ASN A 98 CG OD1 ND2 REMARK 470 LEU A 99 CG CD1 CD2 REMARK 470 LYS B 46 CG CD CE NZ REMARK 470 ASP B 48 CG OD1 OD2 REMARK 470 CYS B 50 SG REMARK 470 ARG B 52 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 54 CB CG CD REMARK 470 GLU B 55 CG CD OE1 OE2 REMARK 470 LYS B 59 CG CD CE NZ REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 ILE B 68 CG1 CG2 CD1 REMARK 470 LYS B 70 CG CD CE NZ REMARK 470 ARG B 71 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 90 CG CD CE NZ REMARK 470 GLU B 91 CG CD OE1 OE2 REMARK 470 LEU B 92 CG CD1 CD2 REMARK 470 ARG B 94 CG CD NE CZ NH1 NH2 REMARK 470 THR B 95 OG1 CG2 REMARK 470 LEU B 96 CG CD1 CD2 REMARK 470 ASN B 98 CG OD1 ND2 REMARK 470 LEU B 99 CG CD1 CD2
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 48 67.72 -118.30 REMARK 500 ALA A 49 -84.11 -77.28 REMARK 500 CYS A 50 -64.88 -25.29 REMARK 500 GLU A 51 -96.16 -37.81 REMARK 500 ARG A 52 76.85 -54.07 REMARK 500 ALA A 53 -146.02 0.20 REMARK 500 PRO A 56 153.22 -40.92 REMARK 500 ALA A 61 -72.66 -83.38 REMARK 500 ASN A 64 76.74 55.45 REMARK 500 LYS A 70 78.91 -102.40 REMARK 500 ARG A 71 -23.69 -31.44 REMARK 500 LYS A 78 -70.52 -26.83 REMARK 500 ARG A 79 -85.14 -41.20 REMARK 500 ARG A 81 -76.20 -54.17 REMARK 500 PHE A 89 -35.11 -38.11 REMARK 500 LYS A 90 -78.57 -57.73 REMARK 500 GLU A 91 -63.75 -28.35 REMARK 500 ASN A 98 -82.64 -127.54 REMARK 500 ASP B 48 67.42 -118.63 REMARK 500 ALA B 49 -83.87 -77.12 REMARK 500 CYS B 50 -64.78 -25.57 REMARK 500 GLU B 51 -96.29 -37.82 REMARK 500 ARG B 52 76.62 -53.87 REMARK 500 ALA B 53 -146.11 0.22 REMARK 500 PRO B 56 153.03 -40.83 REMARK 500 ALA B 61 -72.84 -83.12 REMARK 500 ASN B 64 76.67 55.19 REMARK 500 LYS B 70 79.26 -102.16 REMARK 500 ARG B 71 -23.86 -31.79 REMARK 500 LYS B 78 -70.57 -27.21 REMARK 500 ARG B 79 -85.15 -41.08 REMARK 500 ARG B 81 -75.82 -54.34 REMARK 500 PHE B 89 -34.99 -37.89 REMARK 500 LYS B 90 -78.50 -57.85 REMARK 500 GLU B 91 -63.52 -28.53 REMARK 500 ASN B 98 -83.00 -127.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DG C 7 0.06 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 104 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 60 SG REMARK 620 2 CYS A 67 SG 101.5 REMARK 620 3 CYS A 37 SG 97.3 126.7 REMARK 620 4 CYS A 57 SG 82.2 136.9 94.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 105 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 37 SG REMARK 620 2 CYS A 40 SG 96.5 REMARK 620 3 CYS A 47 SG 94.5 117.4 REMARK 620 4 CYS A 57 SG 89.0 103.2 138.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 104 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 57 SG REMARK 620 2 CYS B 67 SG 137.7 REMARK 620 3 CYS B 60 SG 82.0 101.1 REMARK 620 4 CYS B 37 SG 94.0 127.0 96.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 105 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 37 SG REMARK 620 2 CYS B 40 SG 95.9 REMARK 620 3 CYS B 57 SG 89.3 103.5 REMARK 620 4 CYS B 47 SG 93.8 117.6 138.2 REMARK 620 N 1 2 3
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 104 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 105 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 104 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 105
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2ERE RELATED DB: PDB REMARK 900 RELATED ID: 2ER8 RELATED DB: PDB
DBREF 2ERG A 32 103 UNP P08638 LEUR_YEAST 32 103 DBREF 2ERG B 32 103 UNP P08638 LEUR_YEAST 32 103 DBREF 2ERG C 1 15 PDB 2ERG 2ERG 1 15 DBREF 2ERG D 16 30 PDB 2ERG 2ERG 16 30
SEQADV 2ERG CYS A 50 UNP P08638 HIS 50 ENGINEERED SEQADV 2ERG CYS B 50 UNP P08638 HIS 50 ENGINEERED
SEQRES 1 C 15 DT DT DG DC DC DG DG DT DA DC DC DG DG SEQRES 2 C 15 DC DA SEQRES 1 D 15 DT DT DG DC DC DG DG DT DA DC DC DG DG SEQRES 2 D 15 DC DA SEQRES 1 A 72 LYS ARG LYS PHE ALA CYS VAL GLU CYS ARG GLN GLN LYS SEQRES 2 A 72 SER LYS CYS ASP ALA CYS GLU ARG ALA PRO GLU PRO CYS SEQRES 3 A 72 THR LYS CYS ALA LYS LYS ASN VAL PRO CYS ILE LEU LYS SEQRES 4 A 72 ARG ASP PHE ARG ARG THR TYR LYS ARG ALA ARG ASN GLU SEQRES 5 A 72 ALA ILE GLU LYS ARG PHE LYS GLU LEU THR ARG THR LEU SEQRES 6 A 72 THR ASN LEU THR SER ASP GLU SEQRES 1 B 72 LYS ARG LYS PHE ALA CYS VAL GLU CYS ARG GLN GLN LYS SEQRES 2 B 72 SER LYS CYS ASP ALA CYS GLU ARG ALA PRO GLU PRO CYS SEQRES 3 B 72 THR LYS CYS ALA LYS LYS ASN VAL PRO CYS ILE LEU LYS SEQRES 4 B 72 ARG ASP PHE ARG ARG THR TYR LYS ARG ALA ARG ASN GLU SEQRES 5 B 72 ALA ILE GLU LYS ARG PHE LYS GLU LEU THR ARG THR LEU SEQRES 6 B 72 THR ASN LEU THR SER ASP GLU
HET ZN A 104 1 HET ZN A 105 1 HET ZN B 104 1 HET ZN B 105 1
HETNAM ZN ZINC ION
FORMUL 5 ZN 4(ZN 2+) FORMUL 9 HOH *13(H2 O)
HELIX 1 1 CYS A 37 GLN A 43 1 7 HELIX 2 2 THR A 58 ASN A 64 1 7 HELIX 3 3 TYR A 77 THR A 97 1 21 HELIX 4 4 CYS B 37 GLN B 43 1 7 HELIX 5 5 THR B 58 ASN B 64 1 7 HELIX 6 6 TYR B 77 THR B 97 1 21
LINK ZN ZN A 104 SG CYS A 60 1555 1555 2.48 LINK ZN ZN A 104 SG CYS A 67 1555 1555 2.28 LINK ZN ZN A 104 SG CYS A 37 1555 1555 2.34 LINK ZN ZN A 104 SG CYS A 57 1555 1555 2.17 LINK ZN ZN A 105 SG CYS A 37 1555 1555 2.23 LINK ZN ZN A 105 SG CYS A 40 1555 1555 2.33 LINK ZN ZN A 105 SG CYS A 47 1555 1555 2.05 LINK ZN ZN A 105 SG CYS A 57 1555 1555 2.49 LINK ZN ZN B 104 SG CYS B 57 1555 1555 2.18 LINK ZN ZN B 104 SG CYS B 67 1555 1555 2.25 LINK ZN ZN B 104 SG CYS B 60 1555 1555 2.51 LINK ZN ZN B 104 SG CYS B 37 1555 1555 2.36 LINK ZN ZN B 105 SG CYS B 37 1555 1555 2.25 LINK ZN ZN B 105 SG CYS B 40 1555 1555 2.31 LINK ZN ZN B 105 SG CYS B 57 1555 1555 2.47 LINK ZN ZN B 105 SG CYS B 47 1555 1555 2.07
SITE 1 AC1 5 CYS A 37 CYS A 57 CYS A 60 CYS A 67 SITE 2 AC1 5 ZN A 105 SITE 1 AC2 5 CYS A 37 CYS A 40 CYS A 47 CYS A 57 SITE 2 AC2 5 ZN A 104 SITE 1 AC3 5 CYS B 37 CYS B 57 CYS B 60 CYS B 67 SITE 2 AC3 5 ZN B 105 SITE 1 AC4 5 CYS B 37 CYS B 40 CYS B 47 CYS B 57 SITE 2 AC4 5 ZN B 104
CRYST1 66.768 66.768 122.745 90.00 90.00 120.00 P 62 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.014977 0.008647 0.000000 0.00000
SCALE2 0.000000 0.017294 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008147 0.00000