10 20 30 40 50 60 70 80 2EQ4 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 30-MAR-07 2EQ4
TITLE SOLUTION STRUCTURE OF THE 11TH C2H2 TYPE ZINC FINGER DOMAIN TITLE 2 OF ZINC FINGER PROTEIN 224
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER PROTEIN 224; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER DOMAIN; COMPND 5 SYNONYM: ZINC FINGER PROTEIN 27, ZINC FINGER PROTEIN 233, COMPND 6 ZINC FINGER PROTEIN 255, BONE MARROW ZINC FINGER 2, BMZF-2, COMPND 7 ZINC FINGER PROTEIN KOX22; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZNF224, BMZF2, KOX22, ZNF233, ZNF255, ZNF27; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P061225-41; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS C2H2, ZINC FINGER DOMAIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR K.MASUDA,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, AUTHOR 2 M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2EQ4 1 VERSN REVDAT 1 02-OCT-07 2EQ4 0
JRNL AUTH K.MASUDA,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 11TH C2H2 TYPE ZINC JRNL TITL 2 FINGER DOMAIN OF ZINC FINGER PROTEIN 224 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2EQ4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB026969.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.11MM 13C-15N PROTEIN; 20MM REMARK 210 D-TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O ;0.05MM ZNCL2, REMARK 210 1MM IDA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 445 53.25 -109.73 REMARK 500 1 ASN A 457 125.56 -171.23 REMARK 500 1 SER A 479 74.61 -106.41 REMARK 500 1 LYS A 482 73.31 58.36 REMARK 500 1 PRO A 483 86.67 -69.76 REMARK 500 2 LYS A 454 129.60 -170.45 REMARK 500 2 ASN A 457 119.34 -172.46 REMARK 500 2 SER A 484 -63.16 -90.23 REMARK 500 2 PRO A 486 82.05 -69.81 REMARK 500 3 THR A 451 77.46 -116.28 REMARK 500 3 GLU A 453 56.65 -102.42 REMARK 500 3 GLU A 460 -70.56 -52.24 REMARK 500 3 HIS A 478 -178.13 -68.59 REMARK 500 3 LYS A 482 71.31 -118.76 REMARK 500 4 ASN A 457 119.08 -178.12 REMARK 500 4 GLU A 460 -73.45 -52.12 REMARK 500 4 HIS A 478 104.26 -58.18 REMARK 500 5 ASN A 457 113.16 -168.21 REMARK 500 5 HIS A 478 108.30 -53.44 REMARK 500 5 PRO A 486 -171.43 -69.78 REMARK 500 5 SER A 488 55.83 -111.36 REMARK 500 6 SER A 445 -68.03 -133.60 REMARK 500 6 ASN A 457 115.03 -170.56 REMARK 500 6 GLU A 460 -70.90 -54.58 REMARK 500 6 LYS A 482 71.39 52.73 REMARK 500 6 SER A 484 51.52 -97.38 REMARK 500 7 SER A 448 56.17 -93.83 REMARK 500 7 ASN A 457 118.40 -168.49 REMARK 500 7 GLU A 460 -71.45 -54.15 REMARK 500 7 HIS A 478 -178.55 -66.04 REMARK 500 7 LYS A 482 71.90 -114.85 REMARK 500 7 PRO A 483 -175.08 -69.76 REMARK 500 8 SER A 449 134.13 -173.93 REMARK 500 8 ASN A 457 122.11 -176.83 REMARK 500 8 PHE A 465 -176.64 -69.14 REMARK 500 8 GLU A 481 97.56 -62.88 REMARK 500 9 SER A 449 -68.03 -123.75 REMARK 500 9 GLU A 453 -177.00 -61.19 REMARK 500 9 ASN A 457 126.31 -177.15 REMARK 500 9 SER A 466 -73.72 -80.70 REMARK 500 9 LYS A 482 71.88 57.42 REMARK 500 10 LYS A 454 44.40 -99.59 REMARK 500 10 LEU A 455 97.55 -64.46 REMARK 500 10 ASN A 457 118.39 -163.26 REMARK 500 10 LYS A 482 70.89 -167.82 REMARK 500 11 SER A 448 -70.39 -107.30 REMARK 500 11 SER A 449 -61.06 -133.97 REMARK 500 11 GLU A 460 -72.12 -51.92 REMARK 500 11 PRO A 483 90.68 -69.74 REMARK 500 11 SER A 484 -177.65 -68.74 REMARK 500 12 SER A 446 -70.39 -106.98 REMARK 500 12 ASN A 457 118.73 -174.46 REMARK 500 12 PRO A 486 -172.03 -69.76 REMARK 500 14 SER A 449 121.79 -172.43 REMARK 500 14 ASN A 457 117.33 -169.58 REMARK 500 14 HIS A 478 -176.55 -62.91 REMARK 500 14 PRO A 483 85.94 -69.76 REMARK 500 15 ASN A 457 134.94 -176.77 REMARK 500 17 ASN A 457 121.19 -171.29 REMARK 500 17 LYS A 482 70.39 57.04 REMARK 500 18 ASN A 457 117.76 -164.96 REMARK 500 18 CYS A 458 93.82 -68.36 REMARK 500 18 GLU A 460 -74.10 -52.86 REMARK 500 18 HIS A 478 101.30 -58.73 REMARK 500 19 SER A 446 -42.93 -133.90 REMARK 500 19 ASN A 457 139.01 -174.84 REMARK 500 19 PHE A 465 -176.59 -68.58 REMARK 500 19 LYS A 482 71.88 52.40 REMARK 500 20 SER A 449 53.64 -95.16 REMARK 500 20 SER A 479 -72.43 -116.68 REMARK 500 20 PRO A 483 79.75 -69.77 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 458 SG REMARK 620 2 CYS A 461 SG 105.5 REMARK 620 3 HIS A 474 NE2 112.7 120.0 REMARK 620 4 HIS A 478 NE2 103.0 107.7 106.6 REMARK 620 N 1 2 3
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003012948.12 RELATED DB: TARGETDB
DBREF 2EQ4 A 451 483 UNP Q9NZL3 ZN224_HUMAN 451 483
SEQADV 2EQ4 GLY A 444 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 SER A 445 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 SER A 446 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 GLY A 447 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 SER A 448 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 SER A 449 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 GLY A 450 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 SER A 484 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 GLY A 485 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 PRO A 486 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 SER A 487 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 SER A 488 UNP Q9NZL3 EXPRESSION TAG SEQADV 2EQ4 GLY A 489 UNP Q9NZL3 EXPRESSION TAG
SEQRES 1 A 46 GLY SER SER GLY SER SER GLY THR GLY GLU LYS LEU TYR SEQRES 2 A 46 ASN CYS LYS GLU CYS GLY LYS SER PHE SER ARG ALA PRO SEQRES 3 A 46 CYS LEU LEU LYS HIS GLU ARG LEU HIS SER GLY GLU LYS SEQRES 4 A 46 PRO SER GLY PRO SER SER GLY
HET ZN A 201 1
HETNAM ZN ZINC ION
FORMUL 2 ZN ZN 2+
HELIX 1 1 ARG A 467 HIS A 478 1 12
LINK SG CYS A 458 ZN ZN A 201 1555 1555 2.36 LINK SG CYS A 461 ZN ZN A 201 1555 1555 2.22 LINK NE2 HIS A 474 ZN ZN A 201 1555 1555 1.95 LINK NE2 HIS A 478 ZN ZN A 201 1555 1555 2.09
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000