10 20 30 40 50 60 70 80 2EQ1 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-MAR-07 2EQ1
TITLE SOLUTION STRUCTURE OF THE 9TH C2H2 TYPE ZINC FINGER DOMAIN TITLE 2 OF ZINC FINGER PROTEIN 347
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER PROTEIN 347; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER DOMAIN; COMPND 5 SYNONYM: ZINC FINGER PROTEIN 1111; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZNF347, ZNF1111; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P070115-14; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS C2H2, ZINC FINGER DOMAIN, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL KEYWDS 4 GENOMICS, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, AUTHOR 2 M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2EQ1 1 VERSN REVDAT 1 02-OCT-07 2EQ1 0
JRNL AUTH W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 9TH C2H2 TYPE ZINC JRNL TITL 2 FINGER DOMAIN OF ZINC FINGER PROTEIN 347 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2EQ1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB026966.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 90% H2O, 10% D2O ;0.05MM REMARK 210 ZNCL2, 1MM IDA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 475 135.85 -174.86 REMARK 500 1 LYS A 483 70.93 -116.54 REMARK 500 1 ASN A 488 42.81 -97.34 REMARK 500 1 HIS A 507 41.45 -93.68 REMARK 500 1 LYS A 511 72.30 55.01 REMARK 500 1 PRO A 515 -179.55 -69.76 REMARK 500 2 LYS A 483 71.92 -168.95 REMARK 500 2 HIS A 507 41.49 -93.77 REMARK 500 2 LYS A 511 73.04 -157.13 REMARK 500 3 LYS A 483 72.09 -151.62 REMARK 500 3 HIS A 507 41.56 -93.73 REMARK 500 3 PRO A 512 87.02 -69.78 REMARK 500 3 SER A 516 -176.13 -62.12 REMARK 500 3 SER A 517 46.92 -103.69 REMARK 500 4 LYS A 483 69.16 -168.79 REMARK 500 4 HIS A 507 41.57 -93.65 REMARK 500 5 ASN A 488 43.94 -98.52 REMARK 500 5 GLU A 489 -48.23 -130.09 REMARK 500 5 HIS A 507 40.39 -94.14 REMARK 500 5 LYS A 511 71.79 58.85 REMARK 500 6 ASN A 488 33.82 -96.54 REMARK 500 6 HIS A 507 37.88 -94.96 REMARK 500 6 PRO A 512 95.71 -69.75 REMARK 500 7 LYS A 483 72.13 -173.30 REMARK 500 7 LYS A 511 73.46 56.00 REMARK 500 8 LYS A 511 72.73 -116.14 REMARK 500 9 ASN A 488 34.71 -95.97 REMARK 500 10 GLU A 482 44.22 -93.76 REMARK 500 10 HIS A 507 41.64 -93.72 REMARK 500 10 LYS A 511 69.73 -157.97 REMARK 500 11 PRO A 512 86.08 -69.77 REMARK 500 11 PRO A 515 -172.49 -69.78 REMARK 500 12 TYR A 485 50.97 -102.66 REMARK 500 12 LYS A 511 69.88 -163.73 REMARK 500 12 PRO A 512 88.25 -69.80 REMARK 500 13 SER A 478 -177.55 -69.16 REMARK 500 13 THR A 480 69.41 -113.83 REMARK 500 13 HIS A 507 -70.78 -80.74 REMARK 500 13 LYS A 511 71.77 59.56 REMARK 500 14 GLU A 482 63.57 -111.13 REMARK 500 14 LYS A 483 70.89 -156.83 REMARK 500 14 GLU A 510 -74.37 -106.76 REMARK 500 15 LYS A 483 72.76 -154.86 REMARK 500 15 HIS A 507 41.81 -93.63 REMARK 500 15 SER A 517 -175.48 -69.43 REMARK 500 16 LYS A 483 69.38 -150.17 REMARK 500 16 HIS A 507 -74.67 -78.93 REMARK 500 16 SER A 513 113.64 -172.24 REMARK 500 17 CYS A 487 109.22 -59.03 REMARK 500 18 ASN A 488 41.49 -93.92 REMARK 500 18 HIS A 507 41.55 -93.78 REMARK 500 18 LYS A 511 70.51 -159.81 REMARK 500 18 PRO A 515 -179.71 -69.77 REMARK 500 19 GLU A 482 54.12 -104.64 REMARK 500 19 ASN A 488 31.66 -98.88 REMARK 500 19 HIS A 507 -74.71 -78.75 REMARK 500 19 THR A 508 172.23 -56.41 REMARK 500 19 LYS A 511 68.35 -159.12 REMARK 500 19 PRO A 512 -174.43 -69.73 REMARK 500 20 SER A 475 103.79 -58.49 REMARK 500 20 THR A 480 76.87 -110.37 REMARK 500 20 ASN A 488 35.39 -96.31 REMARK 500 20 HIS A 507 41.45 -93.74 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 487 SG REMARK 620 2 CYS A 490 SG 116.7 REMARK 620 3 HIS A 503 NE2 114.8 100.9 REMARK 620 4 HIS A 507 NE2 108.0 114.4 100.9 REMARK 620 N 1 2 3
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003005619.2 RELATED DB: TARGETDB
DBREF 2EQ1 A 480 512 UNP Q96SE7 ZN347_HUMAN 480 512
SEQADV 2EQ1 GLY A 473 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 SER A 474 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 SER A 475 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 GLY A 476 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 SER A 477 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 SER A 478 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 GLY A 479 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 SER A 513 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 GLY A 514 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 PRO A 515 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 SER A 516 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 SER A 517 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ1 GLY A 518 UNP Q96SE7 EXPRESSION TAG
SEQRES 1 A 46 GLY SER SER GLY SER SER GLY THR GLY GLU LYS PRO TYR SEQRES 2 A 46 LYS CYS ASN GLU CYS GLY LYS ALA PHE ARG ALA HIS SER SEQRES 3 A 46 ASN LEU THR THR HIS GLN VAL ILE HIS THR GLY GLU LYS SEQRES 4 A 46 PRO SER GLY PRO SER SER GLY
HET ZN A 201 1
HETNAM ZN ZINC ION
FORMUL 2 ZN ZN 2+
HELIX 1 1 ALA A 496 VAL A 505 1 10
LINK SG CYS A 487 ZN ZN A 201 1555 1555 2.30 LINK SG CYS A 490 ZN ZN A 201 1555 1555 2.29 LINK NE2 HIS A 503 ZN ZN A 201 1555 1555 2.01 LINK NE2 HIS A 507 ZN ZN A 201 1555 1555 2.07
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000