10 20 30 40 50 60 70 80 2EQ0 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-MAR-07 2EQ0
TITLE SOLUTION STRUCTURE OF THE 8TH C2H2 TYPE ZINC FINGER DOMAIN TITLE 2 OF ZINC FINGER PROTEIN 347
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER PROTEIN 347; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER DOMAIN; COMPND 5 SYNONYM: ZINC FINGER PROTEIN 1111; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZNF347, ZNF1111; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P070115-13; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS C2H2, ZINC FINGER DOMAIN, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL KEYWDS 4 GENOMICS, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR K.MASUDA,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, AUTHOR 2 M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2EQ0 1 VERSN REVDAT 1 02-OCT-07 2EQ0 0
JRNL AUTH K.MASUDA,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 8TH C2H2 TYPE ZINC JRNL TITL 2 FINGER DOMAIN OF ZINC FINGER PROTEIN 347 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2EQ0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB026965.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.14MM 13C-15N PROTEIN; 20MM REMARK 210 D-TRIS-HCL (PH7.0); 100MM REMARK 210 NACL; 1MM D-DTT; 0.02% NAN3; REMARK 210 10% D2O ;0.050MM ZNCL2, 1MM REMARK 210 IDA; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 450 54.31 -96.58 REMARK 500 1 HIS A 479 -67.16 -96.83 REMARK 500 1 LYS A 483 71.82 -116.46 REMARK 500 2 SER A 446 61.63 -114.44 REMARK 500 2 GLU A 454 76.82 -119.86 REMARK 500 2 ARG A 467 -74.31 -63.41 REMARK 500 2 GLU A 482 49.18 -103.13 REMARK 500 2 LYS A 483 71.65 -167.62 REMARK 500 3 LYS A 455 73.63 -171.04 REMARK 500 3 HIS A 479 -63.46 -95.63 REMARK 500 3 LYS A 483 72.85 -117.81 REMARK 500 3 PRO A 484 82.94 -69.72 REMARK 500 4 LYS A 455 68.40 -159.05 REMARK 500 4 LYS A 483 71.82 55.58 REMARK 500 4 SER A 489 -71.13 -96.03 REMARK 500 5 SER A 449 59.60 -118.75 REMARK 500 5 SER A 450 42.23 -103.04 REMARK 500 5 LYS A 455 72.85 -167.32 REMARK 500 5 HIS A 479 -69.57 -100.19 REMARK 500 5 GLU A 482 69.60 -105.09 REMARK 500 6 SER A 447 56.44 -118.88 REMARK 500 6 LYS A 455 71.32 -151.32 REMARK 500 6 LYS A 483 71.69 53.99 REMARK 500 6 PRO A 484 83.31 -69.79 REMARK 500 6 SER A 488 56.42 -93.56 REMARK 500 7 LYS A 455 68.51 -174.03 REMARK 500 7 ARG A 467 -72.92 -55.07 REMARK 500 7 LYS A 483 72.89 -161.37 REMARK 500 7 SER A 485 170.38 -55.91 REMARK 500 7 PRO A 487 97.65 -69.74 REMARK 500 8 SER A 446 35.38 -96.31 REMARK 500 8 SER A 450 -68.36 -103.38 REMARK 500 8 LYS A 455 160.70 63.20 REMARK 500 8 LYS A 483 73.29 53.17 REMARK 500 9 ARG A 467 -73.26 -75.64 REMARK 500 9 THR A 480 105.45 -51.78 REMARK 500 9 PRO A 487 84.16 -69.80 REMARK 500 10 SER A 447 79.62 -112.40 REMARK 500 10 LYS A 455 160.63 63.26 REMARK 500 10 ARG A 467 -73.79 -90.17 REMARK 500 10 THR A 480 45.99 -104.37 REMARK 500 10 LYS A 483 73.06 63.24 REMARK 500 11 THR A 452 72.00 -114.43 REMARK 500 11 SER A 488 105.91 -59.11 REMARK 500 12 HIS A 479 -62.43 -94.05 REMARK 500 13 SER A 449 -64.84 -106.95 REMARK 500 13 PRO A 484 96.47 -69.81 REMARK 500 13 PRO A 487 98.55 -69.70 REMARK 500 14 HIS A 479 -69.98 -96.62 REMARK 500 14 LYS A 483 72.25 52.83 REMARK 500 15 LYS A 483 73.66 56.75 REMARK 500 15 PRO A 484 -179.21 -69.78 REMARK 500 16 LYS A 483 73.58 57.55 REMARK 500 16 PRO A 484 90.31 -69.75 REMARK 500 17 SER A 449 -176.57 -66.18 REMARK 500 17 SER A 450 -63.94 -128.71 REMARK 500 17 ARG A 467 -72.02 -63.70 REMARK 500 17 LYS A 483 73.45 -163.64 REMARK 500 18 LYS A 455 68.32 -152.33 REMARK 500 18 ARG A 467 -73.49 -62.01 REMARK 500 18 GLU A 482 -70.07 -110.54 REMARK 500 18 PRO A 487 83.76 -69.76 REMARK 500 19 ARG A 467 -67.07 -94.03 REMARK 500 19 LYS A 483 71.49 -161.68 REMARK 500 19 SER A 489 111.32 -162.18 REMARK 500 20 SER A 446 66.74 -111.26 REMARK 500 20 PRO A 484 80.23 -69.74 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 459 SG REMARK 620 2 CYS A 462 SG 119.8 REMARK 620 3 HIS A 475 NE2 108.7 101.4 REMARK 620 4 HIS A 479 NE2 103.5 122.1 98.6 REMARK 620 N 1 2 3
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003005619.1 RELATED DB: TARGETDB
DBREF 2EQ0 A 452 484 UNP Q96SE7 ZN347_HUMAN 452 484
SEQADV 2EQ0 GLY A 445 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 SER A 446 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 SER A 447 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 GLY A 448 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 SER A 449 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 SER A 450 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 GLY A 451 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 SER A 485 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 GLY A 486 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 PRO A 487 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 SER A 488 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 SER A 489 UNP Q96SE7 EXPRESSION TAG SEQADV 2EQ0 GLY A 490 UNP Q96SE7 EXPRESSION TAG
SEQRES 1 A 46 GLY SER SER GLY SER SER GLY THR GLY GLU LYS PRO TYR SEQRES 2 A 46 LYS CYS HIS GLU CYS GLY LYS VAL PHE ARG ARG ASN SER SEQRES 3 A 46 HIS LEU ALA ARG HIS GLN LEU ILE HIS THR GLY GLU LYS SEQRES 4 A 46 PRO SER GLY PRO SER SER GLY
HET ZN A 201 1
HETNAM ZN ZINC ION
FORMUL 2 ZN ZN 2+
HELIX 1 1 ARG A 468 LEU A 477 1 10
SHEET 1 A 2 TYR A 457 LYS A 458 0 SHEET 2 A 2 VAL A 465 PHE A 466 -1 O PHE A 466 N TYR A 457
LINK SG CYS A 459 ZN ZN A 201 1555 1555 2.39 LINK SG CYS A 462 ZN ZN A 201 1555 1555 2.19 LINK NE2 HIS A 475 ZN ZN A 201 1555 1555 2.10 LINK NE2 HIS A 479 ZN ZN A 201 1555 1555 2.06
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000