10 20 30 40 50 60 70 80 2EPY - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 30-MAR-07 2EPY
TITLE SOLUTION STRUCTURE OF THE 10TH C2H2 TYPE ZINC FINGER DOMAIN TITLE 2 OF ZINC FINGER PROTEIN 268
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER PROTEIN 268; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER DOMAIN, UNP RESIDUES 525-553; COMPND 5 SYNONYM: ZINC FINGER PROTEIN HZF3; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZNF268; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P061218-10; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS C2H2, ZINC FINGER DOMAIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.IMAI,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 2EPY 1 VERSN REVDAT 1 02-OCT-07 2EPY 0
JRNL AUTH M.IMAI,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 10TH C2H2 TYPE ZINC JRNL TITL 2 FINGER DOMAIN OF ZINC FINGER PROTEIN 268 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2EPY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB026963.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.14MM 13C-15N PROTEIN; 20MM REMARK 210 D-TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 0.05MM REMARK 210 ZNCL2+1MM IDA; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 531 32.92 -87.88 REMARK 500 1 ASN A 532 -54.68 -128.05 REMARK 500 1 GLN A 547 -18.82 -49.36 REMARK 500 2 ASN A 531 30.55 -85.05 REMARK 500 2 ASN A 532 -52.19 -125.69 REMARK 500 3 ASN A 531 33.47 -84.29 REMARK 500 3 ASN A 532 -51.63 -129.23 REMARK 500 3 SER A 538 -32.93 -39.11 REMARK 500 4 SER A 520 130.27 -171.49 REMARK 500 4 GLN A 547 -19.46 -48.36 REMARK 500 4 PRO A 556 2.44 -69.80 REMARK 500 5 LYS A 526 101.63 -56.24 REMARK 500 5 ASN A 531 34.99 -84.21 REMARK 500 5 ASN A 532 -50.77 -130.43 REMARK 500 5 SER A 538 -30.31 -36.79 REMARK 500 5 SER A 557 125.74 -173.32 REMARK 500 6 ASN A 531 37.11 -83.16 REMARK 500 6 ASN A 532 -53.19 -132.81 REMARK 500 6 SER A 538 -35.60 -34.56 REMARK 500 6 THR A 551 -28.00 -37.84 REMARK 500 6 GLU A 553 114.69 -34.50 REMARK 500 6 PRO A 556 93.49 -69.71 REMARK 500 7 ASN A 531 33.76 -84.73 REMARK 500 7 ASN A 532 -51.06 -129.69 REMARK 500 7 SER A 538 -31.69 -39.97 REMARK 500 7 GLN A 547 -19.26 -48.52 REMARK 500 8 ASN A 531 34.33 -83.92 REMARK 500 8 ASN A 532 -49.42 -130.49 REMARK 500 8 THR A 551 39.37 -90.15 REMARK 500 9 LYS A 526 51.21 -114.12 REMARK 500 9 ASN A 531 30.10 -88.08 REMARK 500 9 GLU A 553 129.85 -174.60 REMARK 500 10 SER A 538 -33.07 -36.66 REMARK 500 10 THR A 551 44.45 -78.90 REMARK 500 10 SER A 558 108.59 -162.70 REMARK 500 11 SER A 519 142.91 -39.51 REMARK 500 11 GLU A 525 117.28 -169.69 REMARK 500 11 ASN A 531 35.67 -83.64 REMARK 500 11 ASN A 532 -52.75 -131.10 REMARK 500 11 SER A 538 -35.64 -37.78 REMARK 500 12 SER A 523 139.10 -35.61 REMARK 500 12 ASN A 531 34.90 -89.60 REMARK 500 12 ASN A 532 -48.14 -131.24 REMARK 500 12 SER A 538 -34.68 -34.52 REMARK 500 12 GLN A 547 -19.05 -48.97 REMARK 500 12 HIS A 550 -65.13 -90.16 REMARK 500 12 GLU A 553 146.82 -36.14 REMARK 500 12 SER A 554 178.73 -59.27 REMARK 500 12 PRO A 556 97.52 -69.77 REMARK 500 13 ASN A 531 32.32 -84.43 REMARK 500 13 ASN A 532 -52.58 -128.09 REMARK 500 13 GLN A 547 -19.76 -47.83 REMARK 500 13 GLU A 553 134.03 -35.50 REMARK 500 14 SER A 519 99.69 -69.73 REMARK 500 14 ASN A 531 35.28 -84.02 REMARK 500 14 ASN A 532 -50.24 -131.36 REMARK 500 14 SER A 538 -36.00 -34.88 REMARK 500 14 SER A 557 86.31 -69.41 REMARK 500 15 ASN A 531 31.89 -84.40 REMARK 500 15 ASN A 532 -54.20 -127.07 REMARK 500 15 SER A 538 -37.64 -38.16 REMARK 500 15 GLU A 553 174.49 -49.35 REMARK 500 16 SER A 522 43.04 -84.94 REMARK 500 17 SER A 523 128.34 -172.42 REMARK 500 17 ASN A 531 31.79 -84.53 REMARK 500 17 ASN A 532 -52.56 -126.79 REMARK 500 17 SER A 538 -34.39 -38.09 REMARK 500 18 ASN A 532 -51.41 -122.86 REMARK 500 18 GLN A 547 -19.62 -48.05 REMARK 500 19 SER A 523 41.40 72.65 REMARK 500 19 GLN A 547 -19.39 -48.28 REMARK 500 20 ASN A 531 36.80 -83.25 REMARK 500 20 ASN A 532 -52.31 -132.69 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 530 SG REMARK 620 2 CYS A 533 SG 116.4 REMARK 620 3 HIS A 546 NE2 103.5 100.3 REMARK 620 4 HIS A 550 NE2 110.2 107.5 119.0 REMARK 620 N 1 2 3
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003011774.22 RELATED DB: TARGETDB
DBREF 2EPY A 525 553 UNP Q14587 ZN268_HUMAN 525 553
SEQADV 2EPY GLY A 518 UNP Q14587 EXPRESSION TAG SEQADV 2EPY SER A 519 UNP Q14587 EXPRESSION TAG SEQADV 2EPY SER A 520 UNP Q14587 EXPRESSION TAG SEQADV 2EPY GLY A 521 UNP Q14587 EXPRESSION TAG SEQADV 2EPY SER A 522 UNP Q14587 EXPRESSION TAG SEQADV 2EPY SER A 523 UNP Q14587 EXPRESSION TAG SEQADV 2EPY GLY A 524 UNP Q14587 EXPRESSION TAG SEQADV 2EPY SER A 554 UNP Q14587 EXPRESSION TAG SEQADV 2EPY GLY A 555 UNP Q14587 EXPRESSION TAG SEQADV 2EPY PRO A 556 UNP Q14587 EXPRESSION TAG SEQADV 2EPY SER A 557 UNP Q14587 EXPRESSION TAG SEQADV 2EPY SER A 558 UNP Q14587 EXPRESSION TAG SEQADV 2EPY GLY A 559 UNP Q14587 EXPRESSION TAG
SEQRES 1 A 42 GLY SER SER GLY SER SER GLY GLU LYS LEU HIS GLU CYS SEQRES 2 A 42 ASN ASN CYS GLY LYS ALA PHE SER PHE LYS SER GLN LEU SEQRES 3 A 42 ILE ILE HIS GLN ARG ILE HIS THR GLY GLU SER GLY PRO SEQRES 4 A 42 SER SER GLY
HET ZN A 201 1
HETNAM ZN ZINC ION
FORMUL 2 ZN ZN 2+
HELIX 1 1 PHE A 539 ARG A 548 1 10
SHEET 1 A 2 HIS A 528 GLU A 529 0 SHEET 2 A 2 ALA A 536 PHE A 537 -1 O PHE A 537 N HIS A 528
LINK SG CYS A 530 ZN ZN A 201 1555 1555 2.37 LINK SG CYS A 533 ZN ZN A 201 1555 1555 2.26 LINK NE2 HIS A 546 ZN ZN A 201 1555 1555 2.07 LINK NE2 HIS A 550 ZN ZN A 201 1555 1555 2.06
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000