10 20 30 40 50 60 70 80 2EPV - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 30-MAR-07 2EPV
TITLE SOLUTION STRUCTURE OF THE 20TH C2H2 TYPE ZINC FINGER DOMAIN TITLE 2 OF ZINC FINGER PROTEIN 268
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER PROTEIN 268; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC FINGER DOMAIN; COMPND 5 SYNONYM: ZINC FINGER PROTEIN HZF3; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZNF268; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P061218-20; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS C2H2, ZINC FINGER DOMAIN, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 2 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 3 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 4 RSGI, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, AUTHOR 2 M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2EPV 1 VERSN REVDAT 1 02-OCT-07 2EPV 0
JRNL AUTH W.TANABE,S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE 20TH C2H2 TYPE ZINC JRNL TITL 2 FINGER DOMAIN OF ZINC FINGER PROTEIN 268 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2EPV COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-07. REMARK 100 THE RCSB ID CODE IS RCSB026960.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.82MM 13C-15N PROTEIN; 20MM REMARK 210 D-TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O ;0.05MM ZNCL2, REMARK 210 1MM IDA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 798 42.42 -84.05 REMARK 500 1 CYS A 810 152.84 -37.95 REMARK 500 1 LYS A 815 174.41 -56.31 REMARK 500 1 GLU A 827 -36.12 -39.18 REMARK 500 1 THR A 829 -26.63 -38.39 REMARK 500 1 HIS A 830 43.50 -89.43 REMARK 500 1 PRO A 836 91.54 -69.78 REMARK 500 1 SER A 837 41.68 -90.69 REMARK 500 2 CYS A 810 151.80 -36.59 REMARK 500 2 ALA A 831 44.71 -85.16 REMARK 500 3 SER A 797 42.19 39.43 REMARK 500 3 CYS A 810 153.30 -44.84 REMARK 500 3 LYS A 815 173.83 -53.09 REMARK 500 3 THR A 829 -37.67 -39.16 REMARK 500 3 HIS A 830 40.42 -81.91 REMARK 500 4 SER A 803 41.53 -104.22 REMARK 500 4 CYS A 810 152.10 -39.02 REMARK 500 4 HIS A 830 35.10 -83.81 REMARK 500 4 ALA A 831 45.27 -108.59 REMARK 500 4 SER A 838 140.65 -35.04 REMARK 500 5 SER A 803 116.21 -35.71 REMARK 500 5 GLU A 809 107.78 -166.09 REMARK 500 5 CYS A 810 152.84 -35.42 REMARK 500 5 HIS A 830 39.49 -88.36 REMARK 500 5 PRO A 836 2.83 -69.75 REMARK 500 6 CYS A 810 159.06 -39.02 REMARK 500 6 SER A 834 41.45 -109.68 REMARK 500 7 SER A 798 95.25 -55.82 REMARK 500 7 GLU A 805 50.51 39.08 REMARK 500 7 CYS A 810 153.89 -41.90 REMARK 500 7 LYS A 815 175.81 -54.55 REMARK 500 7 HIS A 826 -60.23 -90.02 REMARK 500 7 THR A 829 -35.52 -39.07 REMARK 500 7 HIS A 830 47.23 -78.85 REMARK 500 7 PRO A 836 0.36 -69.79 REMARK 500 8 SER A 803 42.53 -92.74 REMARK 500 8 CYS A 810 156.45 -41.36 REMARK 500 8 LYS A 815 171.98 -50.21 REMARK 500 9 SER A 801 93.02 -69.99 REMARK 500 9 CYS A 810 156.37 -45.14 REMARK 500 9 LYS A 815 173.85 -55.63 REMARK 500 10 CYS A 810 151.95 -39.04 REMARK 500 10 LYS A 815 174.90 -57.44 REMARK 500 10 HIS A 826 -60.28 -92.42 REMARK 500 11 SER A 801 151.21 -36.59 REMARK 500 11 LYS A 815 176.20 -50.24 REMARK 500 11 GLU A 827 -35.64 -39.95 REMARK 500 11 HIS A 830 41.44 -81.57 REMARK 500 12 CYS A 810 153.34 -35.79 REMARK 500 12 LYS A 815 174.70 -53.78 REMARK 500 12 HIS A 830 39.09 -85.11 REMARK 500 13 CYS A 810 155.34 -44.52 REMARK 500 13 GLU A 827 -39.32 -38.87 REMARK 500 13 ALA A 831 100.41 -44.58 REMARK 500 13 VAL A 833 137.36 -37.26 REMARK 500 14 SER A 800 -60.01 -91.62 REMARK 500 14 SER A 801 42.22 39.50 REMARK 500 14 CYS A 810 151.26 -34.37 REMARK 500 14 LYS A 815 176.39 -55.93 REMARK 500 14 HIS A 830 34.42 -84.87 REMARK 500 14 SER A 834 41.95 34.02 REMARK 500 15 SER A 803 42.12 37.67 REMARK 500 15 CYS A 810 153.18 -37.84 REMARK 500 15 LYS A 815 175.70 -56.51 REMARK 500 15 HIS A 830 39.91 -83.36 REMARK 500 15 PRO A 836 2.78 -69.74 REMARK 500 15 SER A 838 99.74 -55.57 REMARK 500 16 CYS A 810 154.76 -48.53 REMARK 500 16 LYS A 815 175.02 -53.76 REMARK 500 16 THR A 829 -38.61 -38.52 REMARK 500 17 CYS A 810 156.13 -41.51 REMARK 500 17 LYS A 815 176.70 -55.09 REMARK 500 18 CYS A 810 152.73 -36.03 REMARK 500 18 LYS A 815 173.42 -54.32 REMARK 500 18 HIS A 830 43.32 -92.55 REMARK 500 18 VAL A 833 40.09 -82.95 REMARK 500 19 SER A 803 -50.52 -123.08 REMARK 500 19 CYS A 810 152.84 -35.45 REMARK 500 19 ALA A 831 105.14 -38.59 REMARK 500 19 VAL A 833 39.83 -84.10 REMARK 500 20 CYS A 810 153.52 -39.53 REMARK 500 20 LYS A 815 172.00 -55.08 REMARK 500 20 HIS A 826 -64.04 -94.88 REMARK 500 20 GLU A 827 -39.06 -36.37 REMARK 500 20 HIS A 830 39.74 -83.42 REMARK 500 20 VAL A 833 115.04 -37.11 REMARK 500 20 SER A 837 46.51 34.32 REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 810 SG REMARK 620 2 CYS A 813 SG 114.0 REMARK 620 3 HIS A 826 NE2 100.1 101.2 REMARK 620 4 HIS A 830 NE2 114.1 112.9 113.2 REMARK 620 N 1 2 3
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO003011774.21 RELATED DB: TARGETDB
DBREF 2EPV A 803 833 UNP Q14587 ZN268_HUMAN 803 833
SEQADV 2EPV GLY A 796 UNP Q14587 EXPRESSION TAG SEQADV 2EPV SER A 797 UNP Q14587 EXPRESSION TAG SEQADV 2EPV SER A 798 UNP Q14587 EXPRESSION TAG SEQADV 2EPV GLY A 799 UNP Q14587 EXPRESSION TAG SEQADV 2EPV SER A 800 UNP Q14587 EXPRESSION TAG SEQADV 2EPV SER A 801 UNP Q14587 EXPRESSION TAG SEQADV 2EPV GLY A 802 UNP Q14587 EXPRESSION TAG SEQADV 2EPV SER A 834 UNP Q14587 EXPRESSION TAG SEQADV 2EPV GLY A 835 UNP Q14587 EXPRESSION TAG SEQADV 2EPV PRO A 836 UNP Q14587 EXPRESSION TAG SEQADV 2EPV SER A 837 UNP Q14587 EXPRESSION TAG SEQADV 2EPV SER A 838 UNP Q14587 EXPRESSION TAG SEQADV 2EPV GLY A 839 UNP Q14587 EXPRESSION TAG
SEQRES 1 A 44 GLY SER SER GLY SER SER GLY SER GLY GLU LYS PRO TYR SEQRES 2 A 44 GLU CYS ASN GLU CYS GLY LYS ALA PHE ILE TRP LYS SER SEQRES 3 A 44 LEU LEU ILE VAL HIS GLU ARG THR HIS ALA GLY VAL SER SEQRES 4 A 44 GLY PRO SER SER GLY
HET ZN A 201 1
HETNAM ZN ZINC ION
FORMUL 2 ZN ZN 2+
HELIX 1 1 TRP A 819 ARG A 828 1 10 HELIX 2 2 THR A 829 ALA A 831 5 3
SHEET 1 A 2 TYR A 808 GLU A 809 0 SHEET 2 A 2 ALA A 816 PHE A 817 -1 O PHE A 817 N TYR A 808
LINK SG CYS A 810 ZN ZN A 201 1555 1555 2.35 LINK SG CYS A 813 ZN ZN A 201 1555 1555 2.22 LINK NE2 HIS A 826 ZN ZN A 201 1555 1555 2.08 LINK NE2 HIS A 830 ZN ZN A 201 1555 1555 2.06
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000