10 20 30 40 50 60 70 80 2ELJ - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 27-MAR-07 2ELJ
TITLE SOLUTION STRUCTURE OF THE SWIRM DOMAIN OF BAKER'S YEAST TITLE 2 TRANSCRIPTIONAL ADAPTER 2
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL ADAPTER 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SWIRM; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: ADA2; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060216-01; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS YDR448W, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.YONEYAMA,N.TOCHIO,S.KOSHIBA,T.TOMIZAWA,S.WATANABE, AUTHOR 2 T.HARADA,T.UMEHARA,A.TANAKA,T.KIGAWA,S.YOKOYAMA,RIKEN AUTHOR 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2ELJ 1 VERSN REVDAT 1 02-OCT-07 2ELJ 0
JRNL AUTH M.YONEYAMA,N.TOCHIO,S.KOSHIBA,T.TOMIZAWA, JRNL AUTH 2 S.WATANABE,T.HARADA,T.UMEHARA,A.TANAKA,T.KIGAWA, JRNL AUTH 3 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SWIRM DOMAIN OF BAKER'S JRNL TITL 2 YEAST TRANSCRIPTIONAL ADAPTER 2 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2ELJ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAY-07. REMARK 100 THE RCSB ID CODE IS RCSB026813.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.3MM SAMPLE U-15N,13C; 20MM REMARK 210 D-TRIS-HCL; 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE2 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 1.3, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 5 41.67 39.44 REMARK 500 1 ASN A 86 31.01 39.00 REMARK 500 2 GLN A 29 -38.83 -35.66 REMARK 500 2 LYS A 35 40.42 39.58 REMARK 500 2 ASP A 71 151.45 -38.51 REMARK 500 2 GLN A 85 35.50 -83.92 REMARK 500 2 ASN A 86 41.40 37.54 REMARK 500 3 SER A 3 42.19 35.38 REMARK 500 3 LYS A 35 50.48 36.40 REMARK 500 4 SER A 2 -58.88 -124.86 REMARK 500 4 LEU A 23 159.05 -44.98 REMARK 500 4 ASN A 69 36.95 -86.98 REMARK 500 4 ASN A 86 39.05 38.30 REMARK 500 5 SER A 2 90.51 -67.68 REMARK 500 5 ASN A 25 -39.32 -36.60 REMARK 500 5 ASN A 86 37.62 35.76 REMARK 500 6 SER A 6 137.70 -172.81 REMARK 500 6 ASN A 8 41.72 -95.91 REMARK 500 6 ASP A 71 148.22 -36.81 REMARK 500 6 ASN A 86 29.06 39.89 REMARK 500 7 ALA A 17 143.68 -38.12 REMARK 500 8 SER A 3 -60.00 -103.06 REMARK 500 8 HIS A 16 35.28 -96.54 REMARK 500 8 LEU A 23 151.30 -42.35 REMARK 500 8 CYS A 31 -36.07 -37.56 REMARK 500 8 LYS A 61 -37.57 -39.19 REMARK 500 8 ARG A 65 -33.23 -38.54 REMARK 500 8 ASN A 69 49.03 -92.93 REMARK 500 8 ASN A 86 41.23 36.66 REMARK 500 9 SER A 6 110.28 -160.77 REMARK 500 9 HIS A 16 33.78 -88.98 REMARK 500 9 LYS A 61 -39.72 -34.53 REMARK 500 9 ASN A 86 36.24 35.35 REMARK 500 10 SER A 2 107.19 -40.02 REMARK 500 10 LYS A 35 45.26 39.87 REMARK 500 10 ASN A 58 62.11 -113.54 REMARK 500 10 ASN A 86 29.85 42.54 REMARK 500 11 HIS A 16 50.23 -102.64 REMARK 500 11 LEU A 23 156.40 -40.99 REMARK 500 11 ASN A 58 50.35 -110.20 REMARK 500 12 LEU A 23 141.69 -38.90 REMARK 500 12 ASP A 71 158.44 -46.59 REMARK 500 12 ASN A 86 33.27 36.19 REMARK 500 13 ALA A 17 140.47 -39.48 REMARK 500 13 CYS A 31 -39.18 -37.50 REMARK 500 13 LYS A 61 -31.69 -35.36 REMARK 500 13 ASN A 69 46.32 -84.22 REMARK 500 13 GLN A 85 35.28 -84.27 REMARK 500 13 ASN A 86 37.20 34.39 REMARK 500 14 LEU A 23 153.97 -40.51 REMARK 500 14 ASP A 71 144.69 -38.65 REMARK 500 14 ASN A 86 34.44 35.24 REMARK 500 15 SER A 2 31.16 71.45 REMARK 500 15 SER A 12 -37.49 -37.59 REMARK 500 15 HIS A 16 31.38 -99.63 REMARK 500 16 ASP A 71 150.53 -37.59 REMARK 500 16 ASN A 86 31.41 39.64 REMARK 500 17 SER A 2 113.99 -170.70 REMARK 500 17 HIS A 16 42.84 -94.49 REMARK 500 17 LEU A 23 173.03 -50.78 REMARK 500 17 ASN A 69 41.83 -98.45 REMARK 500 17 ASN A 86 40.46 34.33 REMARK 500 18 SER A 3 -60.47 -98.15 REMARK 500 18 ASN A 8 100.90 -39.97 REMARK 500 18 ASN A 69 40.34 -84.91 REMARK 500 18 ASN A 86 29.71 40.06 REMARK 500 19 SER A 2 47.22 38.28 REMARK 500 19 ILE A 14 -70.70 -76.79 REMARK 500 19 ALA A 17 142.43 -36.86 REMARK 500 19 ALA A 21 -35.25 -35.15 REMARK 500 19 CYS A 31 -37.09 -37.59 REMARK 500 19 ASN A 69 45.12 -103.20 REMARK 500 19 ASN A 86 36.03 37.49 REMARK 500 20 THR A 55 30.77 -90.07 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MY_001000053.1 RELATED DB: TARGETDB
DBREF 2ELJ A 8 88 UNP Q02336 ADA2_YEAST 354 434
SEQADV 2ELJ GLY A 1 UNP Q02336 EXPRESSION TAG SEQADV 2ELJ SER A 2 UNP Q02336 EXPRESSION TAG SEQADV 2ELJ SER A 3 UNP Q02336 EXPRESSION TAG SEQADV 2ELJ GLY A 4 UNP Q02336 EXPRESSION TAG SEQADV 2ELJ SER A 5 UNP Q02336 EXPRESSION TAG SEQADV 2ELJ SER A 6 UNP Q02336 EXPRESSION TAG SEQADV 2ELJ GLY A 7 UNP Q02336 EXPRESSION TAG
SEQRES 1 A 88 GLY SER SER GLY SER SER GLY ASN MET THR ILE SER ASP SEQRES 2 A 88 ILE GLN HIS ALA PRO ASP TYR ALA LEU LEU SER ASN ASP SEQRES 3 A 88 GLU GLN GLN LEU CYS ILE GLN LEU LYS ILE LEU PRO LYS SEQRES 4 A 88 PRO TYR LEU VAL LEU LYS GLU VAL MET PHE ARG GLU LEU SEQRES 5 A 88 LEU LYS THR GLY GLY ASN LEU SER LYS SER ALA CYS ARG SEQRES 6 A 88 GLU LEU LEU ASN ILE ASP PRO ILE LYS ALA ASN ARG ILE SEQRES 7 A 88 TYR ASP PHE PHE GLN SER GLN ASN TRP MET
HELIX 1 1 ILE A 11 HIS A 16 1 6 HELIX 2 2 SER A 24 LEU A 34 1 11 HELIX 3 3 LEU A 37 GLY A 56 1 20 HELIX 4 4 SER A 60 LEU A 68 1 9 HELIX 5 5 ASP A 71 GLN A 85 1 15
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000