10 20 30 40 50 60 70 80 2EGA - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 28-FEB-07 2EGA
TITLE SOLUTION STRUCTURE OF THE FIRST SH3 DOMAIN FROM HUMAN TITLE 2 KIAA0418 PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SH3 AND PX DOMAIN-CONTAINING PROTEIN 2A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 SYNONYM: KIAA0418 PROTEIN, SH3 MULTIPLE DOMAINS PROTEIN 1, COMPND 6 FIVE SH3 DOMAIN-CONTAINING PROTEIN, ADAPTOR PROTEIN TKS5; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SH3MD1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050905-04; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS SH3 DOMAIN, KIAA0418 PROTEIN, SH3MD1, SH3 MULTIPLE DOMAINS KEYWDS 2 1, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR K.INOUE,C.KUROSAKI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN AUTHOR 2 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2EGA 1 VERSN REVDAT 1 28-AUG-07 2EGA 0
JRNL AUTH K.INOUE,C.KUROSAKI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FIRST SH3 DOMAIN FROM JRNL TITL 2 HUMAN KIAA0418 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2EGA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-07. REMARK 100 THE RCSB ID CODE IS RCSB026628.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.13MM U-15N, 13C-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL; REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : ECA REMARK 210 SPECTROMETER MANUFACTURER : JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DELTA NMR 4.3.2, NMRPIPE REMARK 210 20060324, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9807, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 71.76 -109.49 REMARK 500 1 SER A 26 73.80 -109.80 REMARK 500 2 SER A 26 66.49 -108.61 REMARK 500 2 ILE A 36 -61.54 -91.12 REMARK 500 2 PRO A 67 88.65 -69.74 REMARK 500 3 GLN A 20 -41.24 -130.55 REMARK 500 3 SER A 23 45.99 -94.75 REMARK 500 3 SER A 26 72.02 -107.29 REMARK 500 3 ALA A 62 109.18 -54.81 REMARK 500 4 SER A 5 147.13 -171.83 REMARK 500 4 SER A 23 -56.09 -124.93 REMARK 500 4 ALA A 62 105.44 -51.96 REMARK 500 4 GLN A 63 -72.55 -52.16 REMARK 500 5 SER A 5 146.84 -173.88 REMARK 500 5 GLN A 20 -68.92 -93.02 REMARK 500 5 GLU A 21 -67.07 -129.71 REMARK 500 5 ALA A 62 109.68 -59.20 REMARK 500 5 SER A 65 -53.72 -122.73 REMARK 500 6 SER A 5 -68.57 -101.15 REMARK 500 6 GLU A 21 -179.75 -172.35 REMARK 500 6 ALA A 62 105.17 -51.82 REMARK 500 7 SER A 3 -74.09 -56.98 REMARK 500 7 GLN A 20 -72.19 -123.44 REMARK 500 7 GLU A 21 -70.80 -130.16 REMARK 500 7 SER A 23 105.27 -59.74 REMARK 500 7 ALA A 62 107.34 -51.96 REMARK 500 7 SER A 68 60.94 -107.66 REMARK 500 8 SER A 6 -68.93 -123.92 REMARK 500 8 LYS A 19 46.35 -100.69 REMARK 500 8 ASN A 22 -74.11 -57.20 REMARK 500 9 LEU A 27 174.74 -55.41 REMARK 500 9 GLU A 50 -71.72 -86.39 REMARK 500 10 GLN A 20 -74.23 -121.99 REMARK 500 10 GLU A 21 -67.05 -129.42 REMARK 500 10 SER A 23 95.72 -61.71 REMARK 500 10 ILE A 36 -60.06 -95.14 REMARK 500 10 ALA A 62 105.08 -51.95 REMARK 500 10 GLN A 63 108.95 -52.96 REMARK 500 11 ILE A 36 -63.84 -104.42 REMARK 500 11 TYR A 59 30.66 -97.73 REMARK 500 11 ALA A 62 104.83 -55.60 REMARK 500 11 SER A 65 -72.88 -113.78 REMARK 500 11 PRO A 67 -172.95 -69.75 REMARK 500 12 GLN A 20 -44.06 -132.94 REMARK 500 12 SER A 23 55.81 -104.89 REMARK 500 13 SER A 2 -178.69 -66.47 REMARK 500 13 SER A 6 -70.94 -65.20 REMARK 500 13 ASN A 16 90.32 -67.69 REMARK 500 13 LYS A 19 -179.12 -59.54 REMARK 500 13 SER A 23 99.30 -58.53 REMARK 500 14 GLN A 20 -72.16 -133.46 REMARK 500 14 GLU A 21 -60.38 -124.85 REMARK 500 14 SER A 23 92.87 -66.96 REMARK 500 14 LEU A 27 -174.84 -68.55 REMARK 500 15 GLU A 21 -60.39 -124.31 REMARK 500 15 SER A 65 64.44 -116.26 REMARK 500 16 SER A 2 101.89 -56.64 REMARK 500 16 GLU A 21 -73.14 -111.91 REMARK 500 16 ILE A 36 -62.26 -100.47 REMARK 500 16 GLN A 63 109.56 -53.53 REMARK 500 17 GLN A 20 -74.44 -131.50 REMARK 500 17 GLU A 21 35.82 -95.45 REMARK 500 17 SER A 68 131.14 -173.55 REMARK 500 18 ILE A 36 -66.59 -92.43 REMARK 500 18 GLN A 63 107.39 -52.56 REMARK 500 18 PRO A 67 -173.33 -69.83 REMARK 500 19 LEU A 27 172.10 -53.55 REMARK 500 19 TYR A 59 30.81 -97.84 REMARK 500 19 ASN A 64 140.26 -175.49 REMARK 500 19 SER A 65 178.84 -56.99 REMARK 500 19 PRO A 67 80.34 -69.71 REMARK 500 20 SER A 23 101.26 -55.45 REMARK 500 20 SER A 26 85.73 -69.37 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002100407.2 RELATED DB: TARGETDB
DBREF 2EGA A 8 64 UNP Q5TCZ1 SPD2A_HUMAN 168 224
SEQADV 2EGA GLY A 1 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA SER A 2 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA SER A 3 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA GLY A 4 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA SER A 5 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA SER A 6 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA GLY A 7 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA SER A 65 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA GLY A 66 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA PRO A 67 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA SER A 68 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA SER A 69 UNP Q5TCZ1 EXPRESSION TAG SEQADV 2EGA GLY A 70 UNP Q5TCZ1 EXPRESSION TAG
SEQRES 1 A 70 GLY SER SER GLY SER SER GLY LEU GLU GLN TYR VAL VAL SEQRES 2 A 70 VAL SER ASN TYR LYS LYS GLN GLU ASN SER GLU LEU SER SEQRES 3 A 70 LEU GLN ALA GLY GLU VAL VAL ASP VAL ILE GLU LYS ASN SEQRES 4 A 70 GLU SER GLY TRP TRP PHE VAL SER THR SER GLU GLU GLN SEQRES 5 A 70 GLY TRP VAL PRO ALA THR TYR LEU GLU ALA GLN ASN SER SEQRES 6 A 70 GLY PRO SER SER GLY
HELIX 1 1 THR A 58 LEU A 60 5 3
SHEET 1 A 2 TYR A 11 VAL A 12 0 SHEET 2 A 2 GLU A 61 ALA A 62 -1 O GLU A 61 N VAL A 12 SHEET 1 B 3 ASP A 34 LYS A 38 0 SHEET 2 B 3 TRP A 43 SER A 47 -1 O PHE A 45 N ILE A 36 SHEET 3 B 3 GLN A 52 PRO A 56 -1 O VAL A 55 N TRP A 44
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000