10 20 30 40 50 60 70 80 2EFI - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 22-FEB-07 2EFI
TITLE SOLUTION STRUCTURE OF THE CHROMO DOMAIN OF MORTALITY FACTOR TITLE 2 4-LIKE PROTEIN 1 FROM HUMAN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: MORTALITY FACTOR 4-LIKE PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CHROMO DOMAIN; COMPND 5 SYNONYM: MORF-RELATED GENE 15 PROTEIN, TRANSCRIPTION COMPND 6 FACTOR-LIKE PROTEIN MRG15, MSL3-1 PROTEIN; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MORF4L1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060522-07; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS CHROMO DOMAIN, MORTALITY FACTOR 4-LIKE PROTEIN 1, KEYWDS 2 STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR H.LI,M.SATO,N.TOCHIO,T.TOMIZAWA,S.KOSHIBA,T.HARADA, AUTHOR 2 S.WATANABE,T.KIGAWA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 3 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2EFI 1 VERSN REVDAT 1 28-AUG-07 2EFI 0
JRNL AUTH H.LI,M.SATO,N.TOCHIO,T.TOMIZAWA,S.KOSHIBA,T.HARADA, JRNL AUTH 2 S.WATANABE,T.KIGAWA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE CHROMO DOMAIN OF JRNL TITL 2 MORTALITY FACTOR 4-LIKE PROTEIN 1 FROM HUMAN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2EFI COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-FEB-07. REMARK 100 THE RCSB ID CODE IS RCSB026600.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 296 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.13MM CHROMO DOMAIN U-15N, REMARK 210 13C; 20MM D-TRIS-HCL(PH 7.0); REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9827, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 10 -171.04 -69.78 REMARK 500 1 LYS A 11 52.66 -90.59 REMARK 500 1 ASP A 13 149.13 -39.10 REMARK 500 1 PRO A 30 2.94 -69.69 REMARK 500 1 ASP A 61 150.46 -34.54 REMARK 500 1 PRO A 65 -165.95 -69.71 REMARK 500 1 GLN A 80 -35.53 -33.39 REMARK 500 1 ARG A 97 179.39 -51.98 REMARK 500 2 PRO A 10 -178.16 -69.78 REMARK 500 2 ASP A 13 153.33 -42.58 REMARK 500 2 PRO A 30 3.28 -69.76 REMARK 500 2 TYR A 53 106.28 -54.92 REMARK 500 2 SER A 54 106.08 -42.94 REMARK 500 2 ASP A 61 108.67 -40.82 REMARK 500 2 PRO A 65 -170.30 -69.75 REMARK 500 2 GLN A 80 -35.20 -33.14 REMARK 500 3 LYS A 11 54.98 -119.51 REMARK 500 3 PRO A 30 3.37 -69.80 REMARK 500 3 TYR A 53 103.14 -52.96 REMARK 500 3 SER A 54 134.74 -34.50 REMARK 500 3 PRO A 65 -177.06 -69.79 REMARK 500 3 GLN A 80 -32.89 -36.31 REMARK 500 4 PRO A 14 -174.26 -69.72 REMARK 500 4 PRO A 30 3.39 -69.77 REMARK 500 4 TYR A 53 105.35 -52.77 REMARK 500 4 SER A 54 105.32 -40.40 REMARK 500 4 LYS A 58 41.86 -107.10 REMARK 500 4 ASP A 61 106.94 -37.36 REMARK 500 4 PRO A 65 -171.00 -69.72 REMARK 500 4 LYS A 79 -60.58 -97.43 REMARK 500 4 GLN A 80 -38.05 -33.76 REMARK 500 4 ALA A 92 -71.26 -56.57 REMARK 500 4 GLU A 93 27.90 40.38 REMARK 500 5 GLN A 12 47.81 -77.53 REMARK 500 5 HIS A 28 41.72 -106.75 REMARK 500 5 PRO A 30 3.15 -69.79 REMARK 500 5 PHE A 50 99.31 -69.15 REMARK 500 5 TYR A 53 103.25 -56.30 REMARK 500 5 SER A 54 116.43 -38.79 REMARK 500 5 ASN A 57 -39.19 -35.62 REMARK 500 5 LYS A 79 -62.21 -93.33 REMARK 500 5 GLN A 80 -34.36 -33.60 REMARK 500 5 GLU A 93 102.68 -42.52 REMARK 500 6 PRO A 30 3.36 -69.84 REMARK 500 6 ASP A 44 27.97 46.45 REMARK 500 6 ASN A 57 174.95 -48.53 REMARK 500 6 PRO A 65 -170.79 -69.79 REMARK 500 6 LYS A 79 -65.30 -93.50 REMARK 500 6 GLN A 80 -32.88 -36.35 REMARK 500 7 SER A 3 129.54 -37.87 REMARK 500 7 PRO A 10 -177.09 -69.80 REMARK 500 7 GLN A 12 41.62 -82.07 REMARK 500 7 PRO A 14 -178.53 -69.78 REMARK 500 7 PRO A 30 3.26 -69.76 REMARK 500 7 PHE A 50 98.41 -64.06 REMARK 500 7 TYR A 53 107.82 -57.51 REMARK 500 7 TRP A 56 45.63 -98.89 REMARK 500 7 ASP A 61 124.06 -36.68 REMARK 500 7 PRO A 65 -168.35 -69.78 REMARK 500 7 GLN A 78 -26.95 -38.35 REMARK 500 7 LYS A 79 -67.02 -93.12 REMARK 500 7 GLN A 80 -34.54 -33.85 REMARK 500 7 GLU A 93 -31.38 -38.20 REMARK 500 7 MET A 96 42.53 -93.45 REMARK 500 8 PRO A 10 99.65 -69.75 REMARK 500 8 ASP A 13 148.96 -170.69 REMARK 500 8 PRO A 30 2.93 -69.78 REMARK 500 8 TYR A 53 108.85 -53.68 REMARK 500 8 SER A 54 96.06 -52.91 REMARK 500 8 ASP A 61 170.88 -45.49 REMARK 500 8 PRO A 65 -167.61 -69.75 REMARK 500 8 LYS A 79 -60.47 -93.39 REMARK 500 8 GLN A 80 -37.74 -33.21 REMARK 500 8 LYS A 95 166.17 -49.43 REMARK 500 9 SER A 6 147.78 -38.24 REMARK 500 9 PRO A 30 3.58 -69.69 REMARK 500 9 TYR A 53 109.02 -56.13 REMARK 500 9 SER A 54 144.57 -34.55 REMARK 500 9 LYS A 58 107.46 -34.49 REMARK 500 9 PRO A 65 -173.05 -69.77 REMARK 500 9 LYS A 79 -60.06 -91.53 REMARK 500 9 GLN A 80 -37.00 -33.77 REMARK 500 9 GLU A 93 -37.91 -37.09 REMARK 500 10 LYS A 11 141.93 -38.56 REMARK 500 10 ASP A 13 151.48 -38.88 REMARK 500 10 PRO A 30 3.74 -69.77 REMARK 500 10 TYR A 53 105.09 -55.34 REMARK 500 10 SER A 54 109.23 -34.44 REMARK 500 10 LYS A 58 99.56 -32.48 REMARK 500 10 ASP A 61 105.59 -40.82 REMARK 500 10 GLN A 78 -27.43 -38.44 REMARK 500 10 LYS A 79 -64.19 -92.34 REMARK 500 10 MET A 96 41.34 -104.86 REMARK 500 11 PRO A 30 3.27 -69.76 REMARK 500 11 PHE A 50 99.47 -67.38 REMARK 500 11 ASN A 57 92.61 -48.95 REMARK 500 11 ASN A 59 26.39 46.83 REMARK 500 11 ASP A 61 152.25 -35.68 REMARK 500 11 PRO A 65 -169.96 -69.69 REMARK 500 11 GLN A 80 -35.27 -35.12 REMARK 500 12 SER A 3 132.04 -171.20 REMARK 500 12 PRO A 30 3.43 -69.73 REMARK 500 12 ASN A 57 177.19 -55.97 REMARK 500 12 LYS A 58 81.82 -69.56 REMARK 500 12 ASN A 59 -55.93 -123.45 REMARK 500 12 TRP A 60 36.95 -98.15 REMARK 500 12 PRO A 65 -167.27 -69.78 REMARK 500 12 GLN A 80 -38.60 -33.33 REMARK 500 12 ALA A 92 -71.76 -55.84 REMARK 500 12 GLU A 93 40.49 36.02 REMARK 500 13 GLN A 12 76.28 -68.08 REMARK 500 13 PRO A 30 1.59 -69.82 REMARK 500 13 SER A 54 129.77 -34.36 REMARK 500 13 LYS A 58 103.12 -46.99 REMARK 500 13 ASP A 61 143.84 -34.93 REMARK 500 13 PRO A 65 -177.05 -69.75 REMARK 500 13 LYS A 79 -63.89 -94.31 REMARK 500 13 GLN A 80 -33.62 -33.92 REMARK 500 14 LYS A 11 41.25 -84.22 REMARK 500 14 PRO A 30 3.93 -69.79 REMARK 500 14 PHE A 50 105.21 -58.90 REMARK 500 14 SER A 54 107.24 -49.73 REMARK 500 14 LYS A 58 40.02 -103.42 REMARK 500 14 PRO A 65 -179.03 -69.75 REMARK 500 14 LYS A 79 -63.37 -93.49 REMARK 500 14 GLN A 80 -36.12 -33.67 REMARK 500 14 GLU A 93 113.79 -36.11 REMARK 500 14 ALA A 99 127.68 -170.15 REMARK 500 15 SER A 2 -48.86 -132.71 REMARK 500 15 SER A 3 42.32 36.85 REMARK 500 15 PRO A 30 3.37 -69.78 REMARK 500 15 TYR A 53 106.55 -54.32 REMARK 500 15 SER A 54 139.35 -38.78 REMARK 500 15 PRO A 65 -167.45 -69.70 REMARK 500 15 GLN A 80 -33.91 -36.22 REMARK 500 15 GLU A 93 143.40 -36.18 REMARK 500 16 ASP A 13 152.18 -41.19 REMARK 500 16 PRO A 30 3.57 -69.76 REMARK 500 16 TYR A 53 108.87 -54.79 REMARK 500 16 SER A 54 109.66 -35.37 REMARK 500 16 LYS A 58 32.91 38.72 REMARK 500 16 PRO A 65 -164.11 -69.77 REMARK 500 16 LYS A 79 -62.24 -95.09 REMARK 500 16 GLN A 80 -31.23 -38.85 REMARK 500 16 ALA A 92 -70.65 -59.58 REMARK 500 17 SER A 5 -53.14 -129.59 REMARK 500 17 PRO A 10 -177.08 -69.77 REMARK 500 17 LYS A 11 36.71 -84.14 REMARK 500 17 PRO A 30 3.13 -69.81 REMARK 500 17 TYR A 53 106.43 -53.50 REMARK 500 17 TRP A 56 40.91 37.20 REMARK 500 17 LYS A 58 38.76 -97.38 REMARK 500 17 TRP A 60 30.16 -93.34 REMARK 500 17 PRO A 65 -167.77 -69.80 REMARK 500 17 GLN A 80 -36.43 -33.05 REMARK 500 18 SER A 5 105.30 -40.90 REMARK 500 18 SER A 6 42.26 -104.36 REMARK 500 18 MET A 8 -50.61 -129.45 REMARK 500 18 LYS A 11 49.45 -87.45 REMARK 500 18 PRO A 30 3.54 -69.76 REMARK 500 18 PHE A 50 98.61 -62.59 REMARK 500 18 ASN A 57 77.34 -60.29 REMARK 500 18 TRP A 60 -36.44 -37.62 REMARK 500 18 ASP A 61 128.05 -38.06 REMARK 500 18 PRO A 65 -164.62 -69.74 REMARK 500 18 GLN A 80 -37.84 -33.61 REMARK 500 18 GLN A 90 -38.40 -38.91 REMARK 500 18 ALA A 92 -73.03 -51.20 REMARK 500 18 GLU A 93 44.11 36.54 REMARK 500 18 ARG A 97 45.01 34.41 REMARK 500 19 SER A 5 148.08 -171.91 REMARK 500 19 PRO A 10 -167.66 -69.79 REMARK 500 19 PRO A 30 3.29 -69.75 REMARK 500 19 CYS A 37 99.16 -64.10 REMARK 500 19 TYR A 53 109.47 -57.03 REMARK 500 19 SER A 54 105.84 -34.42 REMARK 500 19 LYS A 58 33.19 34.32 REMARK 500 19 PRO A 65 -165.35 -69.77 REMARK 500 19 ALA A 99 109.99 -45.38 REMARK 500 20 SER A 3 124.34 -37.27 REMARK 500 20 MET A 8 -56.58 -126.99 REMARK 500 20 ALA A 9 116.72 -163.53 REMARK 500 20 PRO A 30 2.96 -69.71 REMARK 500 20 PHE A 50 101.92 -58.96 REMARK 500 20 TYR A 53 108.22 -55.01 REMARK 500 20 LYS A 58 42.77 -106.20 REMARK 500 20 ASP A 61 122.62 -36.16 REMARK 500 20 PRO A 65 -172.64 -69.80 REMARK 500 20 LYS A 79 -61.29 -96.74 REMARK 500 20 GLN A 80 -34.20 -33.66 REMARK 500 20 ALA A 92 -71.85 -55.80 REMARK 500 20 LYS A 95 145.63 -175.03 REMARK 500 20 MET A 96 -66.83 -105.34 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO002001486.1 RELATED DB: TARGETDB
REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE DATABASE IS Q9UBU8-2, ISOFORM 2 OF Q9UBU8.
DBREF 2EFI A 8 100 UNP Q9UBU8 MO4L1_HUMAN 1 93
SEQADV 2EFI GLY A 1 UNP Q9UBU8 EXPRESSION TAG SEQADV 2EFI SER A 2 UNP Q9UBU8 EXPRESSION TAG SEQADV 2EFI SER A 3 UNP Q9UBU8 EXPRESSION TAG SEQADV 2EFI GLY A 4 UNP Q9UBU8 EXPRESSION TAG SEQADV 2EFI SER A 5 UNP Q9UBU8 EXPRESSION TAG SEQADV 2EFI SER A 6 UNP Q9UBU8 EXPRESSION TAG SEQADV 2EFI GLY A 7 UNP Q9UBU8 EXPRESSION TAG
SEQRES 1 A 100 GLY SER SER GLY SER SER GLY MET ALA PRO LYS GLN ASP SEQRES 2 A 100 PRO LYS PRO LYS PHE GLN GLU GLY GLU ARG VAL LEU CYS SEQRES 3 A 100 PHE HIS GLY PRO LEU LEU TYR GLU ALA LYS CYS VAL LYS SEQRES 4 A 100 VAL ALA ILE LYS ASP LYS GLN VAL LYS TYR PHE ILE HIS SEQRES 5 A 100 TYR SER GLY TRP ASN LYS ASN TRP ASP GLU TRP VAL PRO SEQRES 6 A 100 GLU SER ARG VAL LEU LYS TYR VAL ASP THR ASN LEU GLN SEQRES 7 A 100 LYS GLN ARG GLU LEU GLN LYS ALA ASN GLN GLU GLN TYR SEQRES 8 A 100 ALA GLU GLY LYS MET ARG GLY ALA ALA
HELIX 1 1 ASP A 74 ALA A 86 1 13 HELIX 2 2 GLN A 88 ALA A 92 1 5
SHEET 1 A 5 VAL A 69 LEU A 70 0 SHEET 2 A 5 ARG A 23 PHE A 27 -1 SHEET 3 A 5 LEU A 32 LYS A 43 -1 SHEET 4 A 5 GLN A 46 TYR A 53 -1 SHEET 5 A 5 GLU A 62 VAL A 64 -1
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000