10 20 30 40 50 60 70 80 2EEL - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER APOPTOSIS 15-FEB-07 2EEL
TITLE SOLUTION STRUCTURE OF THE CIDE-N DOMAIN OF HUMAN CELL DEATH TITLE 2 ACTIVATOR CIDE-A
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DEATH ACTIVATOR CIDE-A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CIDE-N DOMAIN; COMPND 5 SYNONYM: CELL DEATH-INDUCING DFFA-LIKE EFFECTOR A; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CIDEA; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050613-03; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS CIDE-N DOMAIN, CELL DEATH ACTIVATOR CIDE-A, CELL DEATH- KEYWDS 2 INDUCING DFFA-LIKE EFFECTOR A, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 3 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 4 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 5 RSGI, APOPTOSIS
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR X.R.QIN,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2EEL 1 VERSN REVDAT 1 21-AUG-07 2EEL 0
JRNL AUTH X.R.QIN,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE CIDE-N DOMAIN OF HUMAN JRNL TITL 2 CELL DEATH ACTIVATOR CIDE-A JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2EEL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-FEB-07. REMARK 100 THE RCSB ID CODE IS RCSB026568.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.10MM 13C,15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS- REMARK 210 HCL(PH7.0); 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9816, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY, TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 6 87.13 -68.84 REMARK 500 1 ARG A 19 45.90 35.78 REMARK 500 1 LEU A 47 99.54 -57.56 REMARK 500 1 LYS A 79 80.83 -60.84 REMARK 500 1 PRO A 85 -179.69 -69.78 REMARK 500 2 ARG A 19 47.31 36.22 REMARK 500 2 THR A 37 -38.76 -39.26 REMARK 500 2 LEU A 47 95.64 -63.42 REMARK 500 2 LYS A 79 87.80 -61.79 REMARK 500 2 PRO A 85 -178.09 -69.74 REMARK 500 3 ARG A 19 34.29 35.12 REMARK 500 3 LYS A 79 81.74 -62.21 REMARK 500 3 PRO A 85 -178.03 -69.78 REMARK 500 3 PRO A 88 99.63 -69.74 REMARK 500 4 SER A 5 103.65 -38.69 REMARK 500 4 LEU A 33 -71.63 -58.74 REMARK 500 4 LYS A 79 79.76 -64.85 REMARK 500 4 PRO A 85 -164.78 -69.74 REMARK 500 5 SER A 5 -73.17 -121.60 REMARK 500 5 ARG A 19 42.27 36.82 REMARK 500 5 LEU A 33 -70.24 -57.29 REMARK 500 5 LEU A 47 96.96 -45.77 REMARK 500 5 LYS A 79 82.36 -60.77 REMARK 500 5 PRO A 85 -177.10 -69.83 REMARK 500 5 PRO A 88 91.31 -69.70 REMARK 500 6 ARG A 19 44.39 36.61 REMARK 500 6 LEU A 47 103.56 -55.01 REMARK 500 6 VAL A 58 109.64 -57.14 REMARK 500 6 LYS A 79 84.69 -63.37 REMARK 500 6 PRO A 85 -173.73 -69.77 REMARK 500 6 PRO A 88 87.45 -69.85 REMARK 500 7 VAL A 42 39.82 35.87 REMARK 500 7 LEU A 47 99.80 -55.71 REMARK 500 7 ASP A 70 155.44 -38.43 REMARK 500 7 LYS A 79 78.13 -61.29 REMARK 500 7 PRO A 85 -178.65 -69.71 REMARK 500 8 ARG A 19 41.90 39.95 REMARK 500 8 LEU A 33 -70.81 -62.81 REMARK 500 8 VAL A 42 49.02 37.77 REMARK 500 8 ASP A 70 154.74 -37.60 REMARK 500 8 LYS A 79 84.40 -55.96 REMARK 500 8 PRO A 85 -179.32 -69.73 REMARK 500 8 SER A 89 135.37 -173.68 REMARK 500 9 VAL A 42 44.08 35.97 REMARK 500 9 LEU A 47 97.30 -59.27 REMARK 500 9 LYS A 79 89.37 -63.94 REMARK 500 9 PRO A 85 -169.24 -69.76 REMARK 500 9 PRO A 88 1.00 -69.77 REMARK 500 10 SER A 6 116.82 -162.25 REMARK 500 10 ARG A 19 47.54 35.28 REMARK 500 10 VAL A 42 46.03 35.60 REMARK 500 10 LYS A 79 89.55 -60.42 REMARK 500 10 PRO A 85 -177.70 -69.80 REMARK 500 11 SER A 5 42.43 35.79 REMARK 500 11 ARG A 19 43.57 36.62 REMARK 500 11 ILE A 34 -70.59 -41.63 REMARK 500 11 LEU A 47 96.84 -52.46 REMARK 500 11 LYS A 79 99.53 -59.24 REMARK 500 11 PRO A 85 -177.71 -69.77 REMARK 500 12 SER A 2 172.53 -54.66 REMARK 500 12 ARG A 19 48.42 35.28 REMARK 500 12 LEU A 47 97.87 -65.81 REMARK 500 12 LYS A 79 82.54 -62.89 REMARK 500 12 PRO A 85 -178.62 -69.72 REMARK 500 13 LEU A 33 -70.35 -64.13 REMARK 500 13 VAL A 42 44.48 36.87 REMARK 500 13 LEU A 47 95.97 -52.61 REMARK 500 13 LYS A 79 86.90 -61.78 REMARK 500 13 PRO A 85 -172.33 -69.77 REMARK 500 14 ARG A 19 49.24 36.74 REMARK 500 14 LEU A 47 97.91 -47.83 REMARK 500 14 ASP A 70 153.82 -39.40 REMARK 500 14 PRO A 85 -177.08 -69.82 REMARK 500 15 LYS A 79 77.48 -59.39 REMARK 500 15 PRO A 85 -177.99 -69.79 REMARK 500 16 SER A 3 41.90 37.29 REMARK 500 16 SER A 6 99.52 -41.58 REMARK 500 16 ARG A 19 45.46 36.34 REMARK 500 16 LEU A 38 -39.06 -37.41 REMARK 500 16 LYS A 79 93.59 -63.46 REMARK 500 16 PRO A 85 -179.28 -69.71 REMARK 500 17 PRO A 8 -177.30 -69.77 REMARK 500 17 ARG A 19 46.14 35.71 REMARK 500 17 LEU A 47 100.93 -51.77 REMARK 500 17 LYS A 79 77.55 -59.91 REMARK 500 17 PRO A 85 -177.59 -69.81 REMARK 500 18 ASN A 16 178.70 -59.59 REMARK 500 18 LEU A 33 -70.64 -61.71 REMARK 500 18 LEU A 68 169.17 -48.38 REMARK 500 18 LYS A 79 93.83 -61.64 REMARK 500 18 PRO A 85 -179.16 -69.76 REMARK 500 19 SER A 2 160.78 -41.82 REMARK 500 19 ARG A 19 47.74 34.04 REMARK 500 19 PRO A 85 -179.77 -69.77 REMARK 500 19 SER A 89 108.58 -162.77 REMARK 500 20 SER A 3 42.55 37.78 REMARK 500 20 ARG A 19 44.73 34.16 REMARK 500 20 VAL A 42 44.94 37.86 REMARK 500 20 LEU A 47 104.18 -54.42 REMARK 500 20 LYS A 79 84.44 -61.72 REMARK 500 20 PRO A 85 -177.89 -69.80 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002022361.1 RELATED DB: TARGETDB
DBREF 2EEL A 8 85 UNP O60543 CIDEA_HUMAN 33 110
SEQADV 2EEL GLY A 1 UNP O60543 EXPRESSION TAG SEQADV 2EEL SER A 2 UNP O60543 EXPRESSION TAG SEQADV 2EEL SER A 3 UNP O60543 EXPRESSION TAG SEQADV 2EEL GLY A 4 UNP O60543 EXPRESSION TAG SEQADV 2EEL SER A 5 UNP O60543 EXPRESSION TAG SEQADV 2EEL SER A 6 UNP O60543 EXPRESSION TAG SEQADV 2EEL GLY A 7 UNP O60543 EXPRESSION TAG SEQADV 2EEL SER A 86 UNP O60543 EXPRESSION TAG SEQADV 2EEL GLY A 87 UNP O60543 EXPRESSION TAG SEQADV 2EEL PRO A 88 UNP O60543 EXPRESSION TAG SEQADV 2EEL SER A 89 UNP O60543 EXPRESSION TAG SEQADV 2EEL SER A 90 UNP O60543 EXPRESSION TAG SEQADV 2EEL GLY A 91 UNP O60543 EXPRESSION TAG
SEQRES 1 A 91 GLY SER SER GLY SER SER GLY PRO ALA ARG PRO PHE ARG SEQRES 2 A 91 VAL SER ASN HIS ASP ARG SER SER ARG ARG GLY VAL MET SEQRES 3 A 91 ALA SER SER LEU GLN GLU LEU ILE SER LYS THR LEU ASP SEQRES 4 A 91 ALA LEU VAL ILE ALA THR GLY LEU VAL THR LEU VAL LEU SEQRES 5 A 91 GLU GLU ASP GLY THR VAL VAL ASP THR GLU GLU PHE PHE SEQRES 6 A 91 GLN THR LEU GLY ASP ASN THR HIS PHE MET ILE LEU GLU SEQRES 7 A 91 LYS GLY GLN LYS TRP MET PRO SER GLY PRO SER SER GLY
HELIX 1 1 SER A 29 LEU A 41 1 13 HELIX 2 2 THR A 61 GLN A 66 1 6
SHEET 1 A 4 ARG A 23 ALA A 27 0 SHEET 2 A 4 ARG A 10 SER A 15 -1 N VAL A 14 O ARG A 23 SHEET 3 A 4 THR A 72 GLU A 78 1 O THR A 72 N ARG A 13 SHEET 4 A 4 VAL A 48 LEU A 52 -1 N VAL A 51 O MET A 75
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000