10 20 30 40 50 60 70 80 2E60 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 25-DEC-06 2E60
TITLE SOLUTION STRUCTURE OF THE SURP1 DOMAIN IN SPLICING FACTOR, TITLE 2 ARGININE/SERINE-RICH 8
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPLICING FACTOR, ARGININE/SERINE-RICH 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SURP DOMAIN; COMPND 5 SYNONYM: SFRS8 PROTEIN; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFRS8, SWAP; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060320-20; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS NMR, SURP DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA KEYWDS 4 BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2E60 1 VERSN REVDAT 1 26-JUN-07 2E60 0
JRNL AUTH F.HE,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SURP1 DOMAIN IN SPLICING JRNL TITL 2 FACTOR, ARGININE/SERINE-RICH 8 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2E60 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-JAN-07. REMARK 100 THE RCSB ID CODE IS RCSB026268.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH 7.0); REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3, 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9819, CYANA 2.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY,TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 -176.13 62.61 REMARK 500 1 PRO A 10 -170.98 -69.79 REMARK 500 1 LEU A 11 -74.35 -110.80 REMARK 500 1 PRO A 16 -174.15 -69.72 REMARK 500 1 ASP A 65 35.22 -95.53 REMARK 500 1 LEU A 87 -175.89 56.20 REMARK 500 1 GLU A 89 54.72 -114.97 REMARK 500 1 ASN A 90 -51.35 -159.59 REMARK 500 1 SER A 92 -40.30 -171.55 REMARK 500 2 PRO A 10 -172.36 -69.80 REMARK 500 2 ASP A 65 34.48 -95.61 REMARK 500 2 LEU A 87 -178.44 61.54 REMARK 500 2 GLU A 94 -53.71 -145.50 REMARK 500 3 SER A 2 52.79 -97.99 REMARK 500 3 PRO A 10 -171.44 -69.73 REMARK 500 3 LEU A 11 -74.28 -111.74 REMARK 500 3 PHE A 59 33.63 -98.47 REMARK 500 3 ASP A 65 43.35 -101.37 REMARK 500 3 SER A 92 102.87 -177.79 REMARK 500 4 SER A 2 102.97 -162.14 REMARK 500 4 PRO A 10 -171.09 -69.71 REMARK 500 4 LEU A 11 -74.52 -110.82 REMARK 500 4 PHE A 59 33.71 -95.96 REMARK 500 4 ASP A 65 43.75 -101.16 REMARK 500 4 LEU A 87 171.71 -55.88 REMARK 500 4 GLU A 89 108.59 -169.04 REMARK 500 4 SER A 92 83.64 57.86 REMARK 500 4 GLU A 94 -178.28 62.15 REMARK 500 4 LYS A 95 99.11 -168.82 REMARK 500 5 PRO A 10 -175.03 -69.73 REMARK 500 5 PHE A 59 33.68 -95.81 REMARK 500 5 ASP A 93 81.13 58.14 REMARK 500 6 SER A 6 59.73 -96.17 REMARK 500 6 PRO A 10 -174.66 -69.72 REMARK 500 6 PHE A 59 33.63 -95.86 REMARK 500 6 ASP A 65 42.94 -102.31 REMARK 500 6 LEU A 87 -179.50 58.28 REMARK 500 6 ASP A 93 100.45 62.14 REMARK 500 6 LYS A 96 46.57 -147.95 REMARK 500 7 PRO A 10 -172.32 -69.73 REMARK 500 7 LEU A 11 -74.18 -51.95 REMARK 500 7 PHE A 59 33.60 -99.62 REMARK 500 7 ASP A 65 36.13 -96.07 REMARK 500 7 LEU A 87 -175.96 55.69 REMARK 500 7 LYS A 95 98.17 60.74 REMARK 500 7 LYS A 96 104.67 -169.14 REMARK 500 7 VAL A 100 170.17 -55.11 REMARK 500 8 SER A 3 -46.21 -171.08 REMARK 500 8 PRO A 10 -173.23 -69.77 REMARK 500 8 PHE A 59 33.64 -95.99 REMARK 500 8 ASP A 65 44.00 -101.82 REMARK 500 8 ASN A 90 66.82 61.27 REMARK 500 8 LYS A 91 -62.24 -105.57 REMARK 500 8 SER A 98 31.68 -141.32 REMARK 500 9 SER A 6 49.71 -103.92 REMARK 500 9 PRO A 10 -171.43 -69.78 REMARK 500 9 ASP A 65 36.16 -96.24 REMARK 500 9 LEU A 87 -175.76 55.70 REMARK 500 9 LYS A 95 82.03 60.07 REMARK 500 10 SER A 5 87.95 58.81 REMARK 500 10 PRO A 10 -171.06 -69.67 REMARK 500 10 LEU A 11 -74.27 -53.36 REMARK 500 10 PHE A 59 33.63 -95.74 REMARK 500 10 ASP A 65 44.58 -101.54 REMARK 500 10 LEU A 87 -179.18 -58.54 REMARK 500 10 GLU A 94 -179.59 62.25 REMARK 500 10 LYS A 95 53.35 -153.13 REMARK 500 10 LYS A 96 -176.73 61.12 REMARK 500 10 LYS A 97 42.00 -156.91 REMARK 500 11 SER A 5 -53.51 -150.14 REMARK 500 11 SER A 6 -177.71 62.60 REMARK 500 11 PRO A 10 -171.16 -69.77 REMARK 500 11 LEU A 11 -74.23 -111.85 REMARK 500 11 PRO A 16 -177.58 -69.78 REMARK 500 11 ASP A 65 44.23 -102.78 REMARK 500 11 SER A 92 90.48 54.62 REMARK 500 11 LYS A 97 44.03 -160.24 REMARK 500 12 SER A 5 61.59 -166.94 REMARK 500 12 PRO A 10 -175.36 -69.74 REMARK 500 12 PRO A 16 -175.65 -69.76 REMARK 500 12 PHE A 59 33.59 -99.32 REMARK 500 12 ASP A 65 42.97 -101.91 REMARK 500 12 LEU A 87 -177.98 62.59 REMARK 500 13 SER A 2 70.61 54.77 REMARK 500 13 SER A 6 47.62 -148.23 REMARK 500 13 PRO A 16 -177.50 -69.79 REMARK 500 13 SER A 17 58.71 -95.52 REMARK 500 13 ASP A 18 -41.21 -158.60 REMARK 500 13 ASP A 65 34.66 -95.56 REMARK 500 13 GLU A 89 55.32 -144.08 REMARK 500 13 LYS A 91 -55.44 -131.76 REMARK 500 13 LYS A 96 -65.55 -140.89 REMARK 500 13 VAL A 100 -51.84 -125.03 REMARK 500 14 SER A 3 -53.35 -164.08 REMARK 500 14 SER A 5 -68.50 -162.56 REMARK 500 14 SER A 6 -71.27 -111.66 REMARK 500 14 PRO A 10 -170.97 -69.73 REMARK 500 14 LEU A 11 -74.65 -107.04 REMARK 500 14 PHE A 59 33.68 -95.74 REMARK 500 14 LEU A 87 179.85 59.35 REMARK 500 14 ASP A 93 92.33 60.90 REMARK 500 14 LYS A 96 -60.86 -105.60 REMARK 500 14 LYS A 97 96.38 59.09 REMARK 500 15 SER A 5 -51.04 -138.50 REMARK 500 15 PHE A 59 33.63 -99.86 REMARK 500 15 ASP A 65 44.06 -102.02 REMARK 500 15 GLU A 89 40.25 -172.88 REMARK 500 15 LYS A 91 83.00 -150.53 REMARK 500 15 GLU A 94 84.93 59.92 REMARK 500 15 LYS A 96 53.82 -158.87 REMARK 500 15 SER A 98 177.12 58.79 REMARK 500 16 SER A 2 58.68 -117.97 REMARK 500 16 SER A 5 -66.19 -128.52 REMARK 500 16 PRO A 10 -174.11 -69.80 REMARK 500 16 LEU A 11 -73.92 -107.50 REMARK 500 16 PRO A 16 -172.10 -69.70 REMARK 500 16 PHE A 59 33.67 -99.77 REMARK 500 16 ASP A 65 35.47 -95.39 REMARK 500 16 LEU A 87 -178.71 59.88 REMARK 500 16 LYS A 91 66.18 -151.87 REMARK 500 17 SER A 6 93.87 -164.29 REMARK 500 17 PRO A 10 -172.60 -69.79 REMARK 500 17 LEU A 11 -74.45 -55.97 REMARK 500 17 ASP A 65 34.73 -95.56 REMARK 500 17 LEU A 87 -75.69 -57.93 REMARK 500 17 ALA A 88 99.18 -63.08 REMARK 500 17 GLU A 94 -178.74 62.47 REMARK 500 18 SER A 3 -44.44 -163.13 REMARK 500 18 SER A 5 85.16 53.36 REMARK 500 18 PRO A 10 -171.35 -69.72 REMARK 500 18 LEU A 11 -74.44 -111.38 REMARK 500 18 PRO A 16 -172.84 -69.76 REMARK 500 18 ASP A 65 34.55 -95.67 REMARK 500 18 LEU A 87 -75.56 -52.93 REMARK 500 18 GLU A 89 72.30 -156.60 REMARK 500 18 SER A 92 39.28 -159.98 REMARK 500 18 LYS A 96 -176.13 55.66 REMARK 500 19 PRO A 10 -171.10 -69.76 REMARK 500 19 LYS A 91 -41.38 -166.08 REMARK 500 19 LYS A 97 -63.62 -141.05 REMARK 500 19 SER A 98 -75.98 69.21 REMARK 500 20 SER A 2 -179.52 60.24 REMARK 500 20 PHE A 59 33.73 -97.79 REMARK 500 20 ASP A 65 36.64 -95.21 REMARK 500 20 LEU A 87 179.71 59.39 REMARK 500 20 SER A 92 29.23 -147.12 REMARK 500 20 ASP A 93 92.76 58.34 REMARK 500 20 GLU A 94 37.24 -141.22 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO002001530.1 RELATED DB: TARGETDB
DBREF 2E60 A 8 101 UNP Q8IV81 Q8IV81_HUMAN 126 219
SEQADV 2E60 GLY A 1 UNP Q8IV81 CLONING ARTIFACT SEQADV 2E60 SER A 2 UNP Q8IV81 CLONING ARTIFACT SEQADV 2E60 SER A 3 UNP Q8IV81 CLONING ARTIFACT SEQADV 2E60 GLY A 4 UNP Q8IV81 CLONING ARTIFACT SEQADV 2E60 SER A 5 UNP Q8IV81 CLONING ARTIFACT SEQADV 2E60 SER A 6 UNP Q8IV81 CLONING ARTIFACT SEQADV 2E60 GLY A 7 UNP Q8IV81 CLONING ARTIFACT
SEQRES 1 A 101 GLY SER SER GLY SER SER GLY VAL ALA PRO LEU GLY LEU SEQRES 2 A 101 SER VAL PRO SER ASP VAL GLU LEU PRO PRO THR ALA LYS SEQRES 3 A 101 MET HIS ALA ILE ILE GLU ARG THR ALA SER PHE VAL CYS SEQRES 4 A 101 ARG GLN GLY ALA GLN PHE GLU ILE MET LEU LYS ALA LYS SEQRES 5 A 101 GLN ALA ARG ASN SER GLN PHE ASP PHE LEU ARG PHE ASP SEQRES 6 A 101 HIS TYR LEU ASN PRO TYR TYR LYS PHE ILE GLN LYS ALA SEQRES 7 A 101 MET LYS GLU GLY ARG TYR THR VAL LEU ALA GLU ASN LYS SEQRES 8 A 101 SER ASP GLU LYS LYS LYS SER GLY VAL SER
HELIX 1 1 ALA A 25 ARG A 40 1 16 HELIX 2 2 ALA A 43 LYS A 52 1 10 HELIX 3 3 ASP A 60 LEU A 62 5 3 HELIX 4 4 LEU A 68 GLU A 81 1 14
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000