10 20 30 40 50 60 70 80 2E5H - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-DEC-06 2E5H
TITLE SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN ZINC FINGER TITLE 2 CCHC-TYPE AND RNA BINDING MOTIF 1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF- COMPND 3 CONTAINING PROTEIN 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 6 SYNONYM: U11/U12 SNRNP 31 KDA PROTEIN, U11/U12-31K; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ZCRB1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P060417-20; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS RRM DOMAIN, RBD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR H.IIBUCHI,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, AUTHOR 2 M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2E5H 1 VERSN REVDAT 1 26-JUN-07 2E5H 0
JRNL AUTH H.IIBUCHI,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN ZINC JRNL TITL 2 FINGER CCHC-TYPE AND RNA BINDING MOTIF 1 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT,P REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2E5H COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-JAN-07. REMARK 100 THE RCSB ID CODE IS RCSB026249.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH7.0), 100MM REMARK 210 NACL, 1MM D-DTT, 0.02% NAN3, REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20060702, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9820, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS, REMARK 210 STRUCTURES WITH THE LOWEST REMARK 210 ENERGY,TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A -2 41.55 34.47 REMARK 500 1 LEU A 5 159.38 -46.02 REMARK 500 1 PRO A 7 4.21 -69.76 REMARK 500 1 SER A 8 148.62 -33.80 REMARK 500 1 THR A 11 143.35 -34.63 REMARK 500 1 PRO A 18 84.43 -69.76 REMARK 500 1 ASP A 46 -73.86 -74.63 REMARK 500 1 VAL A 53 102.49 -52.84 REMARK 500 1 PHE A 77 27.93 41.19 REMARK 500 1 ALA A 86 91.04 -67.45 REMARK 500 2 SER A -4 81.85 -64.09 REMARK 500 2 SER A -2 -51.71 -128.65 REMARK 500 2 SER A 2 42.09 -93.82 REMARK 500 2 ALA A 6 49.76 74.47 REMARK 500 2 TYR A 13 98.81 -68.71 REMARK 500 2 PRO A 18 80.00 -69.71 REMARK 500 2 PHE A 19 -29.25 -38.73 REMARK 500 2 LEU A 21 -177.53 -68.91 REMARK 500 2 TYR A 33 -60.21 -102.01 REMARK 500 2 ASP A 44 176.46 -52.73 REMARK 500 2 LYS A 45 -61.44 -98.20 REMARK 500 2 ASP A 46 -71.51 -66.01 REMARK 500 2 ARG A 79 113.15 -174.05 REMARK 500 3 SER A -4 135.31 -170.18 REMARK 500 3 PRO A 18 85.71 -69.71 REMARK 500 3 ASP A 44 178.07 -58.02 REMARK 500 3 ARG A 79 109.54 -165.81 REMARK 500 4 SER A -1 106.25 -173.91 REMARK 500 4 LEU A 5 50.30 -115.80 REMARK 500 4 PRO A 18 87.12 -69.73 REMARK 500 4 PHE A 77 25.90 42.78 REMARK 500 4 ARG A 79 110.02 -167.08 REMARK 500 4 VAL A 80 104.30 -44.62 REMARK 500 5 SER A -5 110.13 -162.13 REMARK 500 5 ALA A 6 54.82 -116.80 REMARK 500 5 THR A 11 132.88 -36.27 REMARK 500 5 PRO A 18 79.99 -69.78 REMARK 500 5 ASP A 44 175.83 -56.70 REMARK 500 5 ARG A 79 108.07 -170.02 REMARK 500 5 VAL A 80 106.88 -48.47 REMARK 500 6 SER A -5 130.72 -39.60 REMARK 500 6 SER A -2 99.08 -49.15 REMARK 500 6 PRO A 18 86.42 -69.80 REMARK 500 6 ASP A 44 178.04 -49.62 REMARK 500 6 ASP A 46 -69.90 -99.55 REMARK 500 6 VAL A 53 109.36 -51.55 REMARK 500 6 ARG A 79 110.17 -164.92 REMARK 500 6 VAL A 80 108.52 -48.26 REMARK 500 7 PRO A 7 3.55 -69.75 REMARK 500 7 SER A 8 150.47 -34.04 REMARK 500 7 PRO A 18 84.36 -69.79 REMARK 500 7 ASP A 44 177.27 -50.56 REMARK 500 7 LYS A 45 -65.06 -100.78 REMARK 500 7 VAL A 53 106.28 -55.30 REMARK 500 7 PHE A 77 29.77 40.78 REMARK 500 7 ARG A 79 106.27 -163.20 REMARK 500 7 VAL A 80 108.53 -43.19 REMARK 500 8 ALA A 6 53.23 31.82 REMARK 500 8 THR A 11 137.17 -37.53 REMARK 500 8 PRO A 18 80.62 -69.75 REMARK 500 8 PHE A 19 -28.49 -39.20 REMARK 500 8 ARG A 48 41.88 70.57 REMARK 500 8 VAL A 53 108.57 -57.35 REMARK 500 8 ALA A 64 -70.07 -53.10 REMARK 500 8 ARG A 79 113.03 -173.85 REMARK 500 8 VAL A 80 96.05 -54.55 REMARK 500 9 SER A -2 128.93 -38.85 REMARK 500 9 PRO A 18 83.08 -69.78 REMARK 500 9 ASP A 46 -64.02 -103.81 REMARK 500 9 VAL A 53 97.57 -48.11 REMARK 500 9 ARG A 79 111.18 -162.45 REMARK 500 10 SER A -2 107.04 -42.79 REMARK 500 10 PRO A 7 -179.68 -69.82 REMARK 500 10 THR A 11 140.75 -38.93 REMARK 500 10 PRO A 18 81.59 -69.76 REMARK 500 10 PHE A 19 -31.59 -38.22 REMARK 500 10 SER A 20 -39.89 -38.91 REMARK 500 10 ASP A 46 -72.57 -74.37 REMARK 500 10 ARG A 79 118.05 -175.03 REMARK 500 10 VAL A 80 96.56 -59.39 REMARK 500 11 SER A -5 42.05 -84.00 REMARK 500 11 PRO A 7 4.91 -69.75 REMARK 500 11 PRO A 18 80.07 -69.78 REMARK 500 11 PHE A 19 -27.86 -40.00 REMARK 500 11 LYS A 32 -19.72 -47.65 REMARK 500 11 ASP A 44 -178.50 -60.68 REMARK 500 11 VAL A 53 109.36 -52.72 REMARK 500 11 ARG A 79 117.42 -174.12 REMARK 500 11 VAL A 80 105.73 -54.73 REMARK 500 12 SER A -5 116.28 -165.34 REMARK 500 12 PRO A 18 89.07 -69.72 REMARK 500 12 ASP A 46 -72.53 -77.81 REMARK 500 12 VAL A 53 109.00 -59.74 REMARK 500 12 PHE A 77 26.76 46.49 REMARK 500 12 ARG A 79 120.75 -171.81 REMARK 500 12 VAL A 80 102.38 -56.75 REMARK 500 13 MET A 1 43.91 35.33 REMARK 500 13 SER A 2 77.52 -105.03 REMARK 500 13 LEU A 5 -64.37 -101.45 REMARK 500 13 PRO A 18 87.12 -69.78 REMARK 500 13 ASP A 46 -70.48 -89.45 REMARK 500 13 ARG A 79 116.23 -161.37 REMARK 500 13 VAL A 80 108.88 -54.70 REMARK 500 13 ILE A 85 148.35 -38.08 REMARK 500 14 SER A -1 42.17 -97.16 REMARK 500 14 ALA A 6 53.29 72.38 REMARK 500 14 PRO A 7 83.75 -69.78 REMARK 500 14 PRO A 18 80.06 -69.70 REMARK 500 14 LEU A 21 -174.77 -64.36 REMARK 500 14 TYR A 33 -61.10 -99.89 REMARK 500 14 ARG A 48 49.90 72.69 REMARK 500 14 ARG A 79 115.07 -173.76 REMARK 500 14 VAL A 80 96.72 -57.34 REMARK 500 14 ILE A 85 106.89 -58.86 REMARK 500 14 ALA A 86 97.85 -65.40 REMARK 500 15 ALA A 6 132.12 -39.13 REMARK 500 15 THR A 11 157.19 -42.59 REMARK 500 15 PRO A 18 80.82 -69.68 REMARK 500 15 VAL A 53 103.51 -53.68 REMARK 500 15 PHE A 77 25.08 47.28 REMARK 500 15 ARG A 79 109.83 -165.06 REMARK 500 16 SER A -2 43.20 -92.40 REMARK 500 16 THR A 11 155.50 -45.89 REMARK 500 16 PRO A 18 83.98 -69.77 REMARK 500 16 ASP A 46 -74.01 -117.57 REMARK 500 16 SER A 50 -38.95 -38.08 REMARK 500 16 ASN A 72 131.84 -36.23 REMARK 500 16 ARG A 79 105.47 -168.79 REMARK 500 16 VAL A 80 108.81 -44.56 REMARK 500 17 PRO A 18 80.13 -69.77 REMARK 500 17 PHE A 19 -31.04 -39.79 REMARK 500 17 LEU A 21 -176.90 -69.51 REMARK 500 17 ASP A 25 -70.12 -56.21 REMARK 500 17 TYR A 33 -60.98 -100.02 REMARK 500 17 ARG A 79 117.78 -175.05 REMARK 500 17 VAL A 80 101.60 -59.02 REMARK 500 18 SER A -4 101.61 -44.77 REMARK 500 18 ALA A 6 54.11 73.81 REMARK 500 18 PRO A 7 2.10 -69.74 REMARK 500 18 SER A 8 135.91 -35.55 REMARK 500 18 PRO A 18 79.86 -69.72 REMARK 500 18 PHE A 19 -32.74 -36.99 REMARK 500 18 LEU A 21 -174.82 -65.10 REMARK 500 18 TYR A 33 -61.18 -101.12 REMARK 500 18 ARG A 79 110.15 -173.99 REMARK 500 18 ILE A 85 108.40 -58.83 REMARK 500 19 ALA A 6 109.84 -59.33 REMARK 500 19 PRO A 18 84.40 -69.77 REMARK 500 19 ASP A 44 -177.41 -58.06 REMARK 500 19 ASP A 46 -74.58 -104.26 REMARK 500 19 PHE A 77 25.85 49.71 REMARK 500 19 ARG A 79 107.43 -166.84 REMARK 500 19 VAL A 80 108.22 -46.90 REMARK 500 20 SER A -2 177.83 -56.82 REMARK 500 20 PRO A 18 80.78 -69.78 REMARK 500 20 PHE A 19 -31.02 -39.29 REMARK 500 20 SER A 20 -38.39 -38.81 REMARK 500 20 LEU A 21 -175.70 -68.29 REMARK 500 20 TYR A 33 -62.85 -99.98 REMARK 500 20 LYS A 43 114.76 -163.11 REMARK 500 20 ASP A 44 174.30 -53.01 REMARK 500 20 LYS A 45 -61.28 -95.61 REMARK 500 20 ARG A 79 113.81 -173.86 REMARK 500 20 VAL A 80 109.59 -53.86 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSG002000344.1 RELATED DB: TARGETDB
DBREF 2E5H A 1 87 UNP Q8TBF4 ZCRB1_HUMAN 1 87
SEQADV 2E5H GLY A -6 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H SER A -5 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H SER A -4 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H GLY A -3 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H SER A -2 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H SER A -1 UNP Q8TBF4 CLONING ARTIFACT SEQADV 2E5H GLY A 0 UNP Q8TBF4 CLONING ARTIFACT
SEQRES 1 A 94 GLY SER SER GLY SER SER GLY MET SER GLY GLY LEU ALA SEQRES 2 A 94 PRO SER LYS SER THR VAL TYR VAL SER ASN LEU PRO PHE SEQRES 3 A 94 SER LEU THR ASN ASN ASP LEU TYR ARG ILE PHE SER LYS SEQRES 4 A 94 TYR GLY LYS VAL VAL LYS VAL THR ILE MET LYS ASP LYS SEQRES 5 A 94 ASP THR ARG LYS SER LYS GLY VAL ALA PHE ILE LEU PHE SEQRES 6 A 94 LEU ASP LYS ASP SER ALA GLN ASN CYS THR ARG ALA ILE SEQRES 7 A 94 ASN ASN LYS GLN LEU PHE GLY ARG VAL ILE LYS ALA SER SEQRES 8 A 94 ILE ALA ILE
HELIX 1 1 THR A 22 PHE A 30 1 9 HELIX 2 2 ASP A 60 ILE A 71 1 12
SHEET 1 A 5 VAL A 36 ILE A 41 0 SHEET 2 A 5 ALA A 54 PHE A 58 -1 O PHE A 55 N THR A 40 SHEET 3 A 5 VAL A 12 SER A 15 -1 N VAL A 14 O ALA A 54 SHEET 4 A 5 ARG A 79 ILE A 85 -1 O SER A 84 N TYR A 13 SHEET 5 A 5 LYS A 74 LEU A 76 -1 N LEU A 76 O ARG A 79
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000