10 20 30 40 50 60 70 80 2E4H - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL PROTEIN 08-DEC-06 2E4H
TITLE SOLUTION STRUCTURE OF CYTOSKELETAL PROTEIN IN COMPLEX WITH TITLE 2 TUBULIN TAIL
COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESTIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CAP-GLY DOMAIN 2, RESIDUES 203-300; COMPND 5 SYNONYM: CYTOPLASMIC LINKER PROTEIN 170 ALPHA-2, CLIP-170, COMPND 6 REED-STERNBERG INTERMEDIATE FILAMENT-ASSOCIATED PROTEIN, COMPND 7 CYTOPLASMIC LINKER PROTEIN 1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: TUBULIN ALPHA-UBIQUITOUS CHAIN; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: C-TAIL, RESIDUES 416-451; COMPND 13 SYNONYM: ALPHA-TUBULIN UBIQUITOUS, TUBULIN K-ALPHA-1, COMPND 14 ALPHA-TUBULIN 3; COMPND 15 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CLIP-170; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX4T; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: A3-TUBULIN; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(STAR); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEX6P
KEYWDS NMR, CYTOSKELETON, CAP-GLY, COMPLEX STRUCTURE, TUBULIN, KEYWDS 2 SOLUTION STRUCTURE, CLIP, STRUCTURAL PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.MISHIMA,T.HAKOSHIMA
REVDAT 2 24-FEB-09 2E4H 1 VERSN REVDAT 1 28-AUG-07 2E4H 0
JRNL AUTH M.MISHIMA,R.MAESAKI,M.KASA,T.WATANABE,M.FUKATA, JRNL AUTH 2 K.KAIBUCHI,T.HAKOSHIMA JRNL TITL STRUCTURAL BASIS FOR TUBULIN RECOGNITION BY JRNL TITL 2 CYTOPLASMIC LINKER PROTEIN 170 AND ITS JRNL TITL 3 AUTOINHIBITION JRNL REF PROC.NATL.ACAD.SCI.USA V. 104 10346 2007 JRNL REFN ISSN 0027-8424 JRNL PMID 17563362 JRNL DOI 10.1073/PNAS.0703876104
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, REMARK 3 RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2E4H COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-DEC-06. REMARK 100 THE RCSB ID CODE IS RCSB026213.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.9 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.9MM U-15N,13C CLIP: REMARK 210 NONLABEL TUBULIN; 30MM BISTRIS REMARK 210 BUFFER K; 1MM DTT; 100% D2O; REMARK 210 0.9MM U-15N CLIP: NONLABEL REMARK 210 TUBULIN; 30MM BISTRIS BUFFER REMARK 210 K; 1MM DTT; 90% H2O, 10% D2O; REMARK 210 0.9MM U-15N,13C TUBULIN: REMARK 210 NONLABEL CLIP; 30MM BISTRIS REMARK 210 BUFFER K; 1MM DTT; 100% D2O; REMARK 210 0.9MM U-15N TUBULIN: NONLABEL REMARK 210 CLIP; 30MM BISTRIS BUFFER K; REMARK 210 1MM DTT; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ, 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE, DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2.4, SPARKY 3.1.10, REMARK 210 CYANA 2.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: STANDARD HETERONUCLEAR NMR TECHNIQUE AND NH RDCS
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 203 REMARK 465 SER A 204 REMARK 465 ILE A 205 REMARK 465 LYS A 206 REMARK 465 LYS A 207 REMARK 465 GLY A 208 REMARK 465 GLU A 209 REMARK 465 PRO A 284 REMARK 465 SER A 285 REMARK 465 THR A 286 REMARK 465 THR A 287 REMARK 465 PRO A 288 REMARK 465 ALA A 289 REMARK 465 LYS A 290 REMARK 465 ALA A 291 REMARK 465 LYS A 292 REMARK 465 ALA A 293 REMARK 465 ASN A 294 REMARK 465 ALA A 295 REMARK 465 VAL A 296 REMARK 465 ARG A 297 REMARK 465 ARG A 298 REMARK 465 VAL A 299 REMARK 465 MET A 300 REMARK 465 GLY B 416 REMARK 465 GLU B 417 REMARK 465 PHE B 418 REMARK 465 SER B 419 REMARK 465 GLU B 420 REMARK 465 ALA B 421 REMARK 465 ARG B 422 REMARK 465 GLU B 423 REMARK 465 ASP B 424 REMARK 465 MET B 425 REMARK 465 ALA B 426 REMARK 465 ALA B 427 REMARK 465 LEU B 428 REMARK 465 GLU B 429 REMARK 465 LYS B 430 REMARK 465 ASP B 431 REMARK 465 TYR B 432 REMARK 465 GLU B 433 REMARK 465 GLU B 434 REMARK 465 VAL B 435 REMARK 465 GLY B 436 REMARK 465 VAL B 437 REMARK 465 ASP B 438 REMARK 465 SER B 439 REMARK 465 VAL B 440 REMARK 465 GLU B 441 REMARK 465 GLY B 442 REMARK 465 GLU B 443
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 211 -169.08 -71.17 REMARK 500 1 PRO A 249 69.93 -65.80 REMARK 500 1 GLU B 445 35.87 -99.52 REMARK 500 1 GLU B 446 140.42 63.52 REMARK 500 2 GLU A 211 -77.12 -59.44 REMARK 500 2 PRO A 249 69.18 -66.59 REMARK 500 2 PRO A 274 162.51 -48.31 REMARK 500 2 GLU B 445 -48.39 -155.09 REMARK 500 3 PRO A 249 68.71 -66.74 REMARK 500 3 GLU B 445 73.57 -102.37 REMARK 500 4 PRO A 249 69.60 -65.15 REMARK 500 4 PRO A 274 162.61 -49.11 REMARK 500 5 GLU A 211 78.70 -113.60 REMARK 500 5 PRO A 249 68.11 -66.45 REMARK 500 5 PRO A 274 162.62 -49.02 REMARK 500 5 GLU B 446 -177.63 61.43 REMARK 500 6 PRO A 249 69.50 -65.07 REMARK 500 6 PRO A 274 162.44 -47.95 REMARK 500 6 GLU B 445 161.12 61.13 REMARK 500 7 PRO A 249 70.90 -65.68 REMARK 500 7 PRO A 274 162.54 -48.21 REMARK 500 7 GLU B 445 -78.66 -122.32 REMARK 500 8 PRO A 249 67.86 -66.65 REMARK 500 8 GLU B 445 -167.01 58.55 REMARK 500 9 PRO A 249 69.00 -66.57 REMARK 500 9 PRO A 274 162.57 -47.81 REMARK 500 10 GLU A 211 96.07 -177.59 REMARK 500 10 PRO A 249 70.01 -66.57 REMARK 500 11 PRO A 249 69.43 -64.89 REMARK 500 11 PRO A 274 162.77 -49.08 REMARK 500 11 GLU B 445 -53.57 -123.18 REMARK 500 12 PRO A 249 67.30 -66.40 REMARK 500 12 GLU B 446 78.87 -108.49 REMARK 500 13 PRO A 249 69.26 -67.03 REMARK 500 14 PRO A 249 68.50 -66.30 REMARK 500 14 GLU B 446 30.40 -150.74 REMARK 500 15 PRO A 249 69.71 -67.43 REMARK 500 15 PRO A 274 162.62 -49.44 REMARK 500 15 GLU B 445 -172.08 -174.50 REMARK 500 15 GLU B 446 -39.22 -178.16 REMARK 500 16 GLU A 211 -174.04 62.47 REMARK 500 16 PRO A 249 68.77 -64.73 REMARK 500 16 PRO A 274 162.74 -49.39 REMARK 500 16 GLU B 446 -41.74 -171.64 REMARK 500 16 GLU B 449 30.89 -95.45 REMARK 500 17 PRO A 249 69.03 -66.05 REMARK 500 17 PRO A 274 162.87 -47.92 REMARK 500 18 PRO A 249 70.00 -65.81 REMARK 500 18 PRO A 274 162.38 -47.72 REMARK 500 18 GLU B 445 -75.50 -88.67 REMARK 500 19 PRO A 249 69.55 -66.25 REMARK 500 19 GLU B 446 74.26 -105.92 REMARK 500 20 PRO A 249 68.74 -66.33 REMARK 500 20 PRO A 274 162.84 -49.20 REMARK 500 20 GLU B 445 -62.46 -161.13 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2E4H A 203 300 UNP P30622 REST_HUMAN 203 300 DBREF 2E4H B 416 451 UNP P68363 TBAK_HUMAN 416 451
SEQRES 1 A 98 GLY SER ILE LYS LYS GLY GLU ARG GLU LEU LYS ILE GLY SEQRES 2 A 98 ASP ARG VAL LEU VAL GLY GLY THR LYS ALA GLY VAL VAL SEQRES 3 A 98 ARG PHE LEU GLY GLU THR ASP PHE ALA LYS GLY GLU TRP SEQRES 4 A 98 CYS GLY VAL GLU LEU ASP GLU PRO LEU GLY LYS ASN ASP SEQRES 5 A 98 GLY ALA VAL ALA GLY THR ARG TYR PHE GLN CYS GLN PRO SEQRES 6 A 98 LYS TYR GLY LEU PHE ALA PRO VAL HIS LYS VAL THR LYS SEQRES 7 A 98 ILE GLY PHE PRO SER THR THR PRO ALA LYS ALA LYS ALA SEQRES 8 A 98 ASN ALA VAL ARG ARG VAL MET SEQRES 1 B 36 GLY GLU PHE SER GLU ALA ARG GLU ASP MET ALA ALA LEU SEQRES 2 B 36 GLU LYS ASP TYR GLU GLU VAL GLY VAL ASP SER VAL GLU SEQRES 3 B 36 GLY GLU GLY GLU GLU GLU GLY GLU GLU TYR
SHEET 1 A 5 GLY A 270 ALA A 273 0 SHEET 2 A 5 TRP A 241 LEU A 246 -1 N VAL A 244 O LEU A 271 SHEET 3 A 5 LYS A 224 GLY A 232 -1 N PHE A 230 O GLY A 243 SHEET 4 A 5 ARG A 217 VAL A 220 -1 N VAL A 218 O GLY A 226 SHEET 5 A 5 THR A 279 LYS A 280 -1 O THR A 279 N LEU A 219 SHEET 1 B 2 ALA A 256 VAL A 257 0 SHEET 2 B 2 THR A 260 ARG A 261 -1 O THR A 260 N VAL A 257
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000