2DW3 - Header Asymmetric Unit

HEADER PHOTOSYNTHESIS 02-AUG-06 2DW3

TITLE SOLUTION STRUCTURE OF THE RHODOBACTER SPHAEROIDES PUFX TITLE 2 MEMBRANE PROTEIN

COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTRINSIC MEMBRANE PROTEIN PUFX; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES IN DATABASE 2-72; COMPND 5 ENGINEERED: YES

SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOBACTER SPHAEROIDES; SOURCE 3 ORGANISM_TAXID: 1063; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET20B+

KEYWDS MEMBRANE PROTEIN, QUINONE EXCHANGE, PHOTOSYNTHESIS, LIGHT- KEYWDS 2 HARVESTING, GXXXG MOTIF, DIMERIZATION

EXPDTA SOLUTION NMR

NUMMDL 7

AUTHOR Z.Y.WANG

REVDAT 2 24-FEB-09 2DW3 1 VERSN REVDAT 1 26-JUN-07 2DW3 0

JRNL AUTH Z.Y.WANG,H.SUZUKI,M.KOBAYASHI,T.NOZAWA JRNL TITL SOLUTION STRUCTURE OF THE RHODOBACTER SPHAEROIDES JRNL TITL 2 PUFX MEMBRANE PROTEIN: IMPLICATIONS FOR THE JRNL TITL 3 QUINONE EXCHANGE AND PROTEIN-PROTEIN INTERACTIONS JRNL REF BIOCHEMISTRY V. 46 3635 2007 JRNL REFN ISSN 0006-2960 JRNL PMID 17335288 JRNL DOI 10.1021/BI0618060

REMARK 1

REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.

REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL

REMARK 4 REMARK 4 2DW3 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08

REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-AUG-06. REMARK 100 THE RCSB ID CODE IS RCSB025914.

REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM PUFX U-15, 13C, CDCL3: REMARK 210 CD3OH (1:1) REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 400 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 97.027, NMRVIEW 5.0.4 REMARK 210 METHOD USED : DISTANCE GEOMETRY, SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 7 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL

REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.

REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 2 -72.05 -161.33 REMARK 500 1 PHE A 6 -75.06 -156.75 REMARK 500 1 ASN A 7 -76.36 72.64 REMARK 500 1 ASP A 8 145.04 60.66 REMARK 500 1 HIS A 9 155.06 75.72 REMARK 500 1 THR A 12 -66.45 68.09 REMARK 500 1 ASN A 13 93.52 54.62 REMARK 500 1 PRO A 55 94.59 -53.36 REMARK 500 1 ILE A 56 160.02 64.12 REMARK 500 1 GLN A 57 -79.22 71.14 REMARK 500 1 GLU A 58 -79.61 79.71 REMARK 500 1 ASN A 59 -43.20 -154.42 REMARK 500 1 GLN A 60 -130.68 -147.60 REMARK 500 1 ASN A 65 -77.00 65.81 REMARK 500 1 ILE A 66 -53.76 75.09 REMARK 500 1 THR A 67 46.59 -175.39 REMARK 500 1 ALA A 69 -51.15 -175.97 REMARK 500 1 LEU A 70 106.41 -173.30 REMARK 500 1 HIS A 72 44.93 -170.80 REMARK 500 1 HIS A 73 105.75 59.98 REMARK 500 2 LYS A 3 -85.31 62.23 REMARK 500 2 THR A 4 -161.36 -74.64 REMARK 500 2 ILE A 5 33.14 38.43 REMARK 500 2 ASN A 7 -50.77 77.38 REMARK 500 2 ASP A 8 107.56 86.64 REMARK 500 2 HIS A 9 -23.32 84.89 REMARK 500 2 LEU A 10 -9.25 82.23 REMARK 500 2 ASN A 11 148.53 59.71 REMARK 500 2 THR A 12 -16.94 66.96 REMARK 500 2 ASN A 13 73.15 39.78 REMARK 500 2 PRO A 55 90.62 -61.45 REMARK 500 2 GLN A 57 42.22 38.63 REMARK 500 2 GLU A 58 83.09 48.40 REMARK 500 2 ALA A 61 61.84 -165.86 REMARK 500 2 ALA A 63 79.37 49.13 REMARK 500 2 ILE A 66 -25.05 85.73 REMARK 500 2 THR A 67 -61.75 85.41 REMARK 500 2 ALA A 69 79.20 -176.92 REMARK 500 2 LEU A 70 -20.14 91.52 REMARK 500 2 HIS A 74 -59.84 -139.93 REMARK 500 2 HIS A 75 97.26 61.40 REMARK 500 3 THR A 4 94.73 -164.96 REMARK 500 3 ILE A 5 27.46 -156.10 REMARK 500 3 ASN A 7 167.60 67.23 REMARK 500 3 ASP A 8 110.06 75.66 REMARK 500 3 HIS A 9 -62.96 79.26 REMARK 500 3 LEU A 10 100.65 62.02 REMARK 500 3 LYS A 15 -39.42 -145.27 REMARK 500 3 THR A 16 -95.72 36.91 REMARK 500 3 MET A 53 41.06 74.52 REMARK 500 3 LEU A 54 80.17 60.35 REMARK 500 3 GLU A 58 172.67 83.31 REMARK 500 3 GLN A 60 -100.74 -89.91 REMARK 500 3 ALA A 61 161.37 58.63 REMARK 500 3 ALA A 63 104.73 87.88 REMARK 500 3 PRO A 64 -167.04 -74.99 REMARK 500 3 THR A 67 -5.86 77.27 REMARK 500 3 ALA A 69 -35.68 -176.72 REMARK 500 3 HIS A 73 -68.92 -169.81 REMARK 500 3 HIS A 76 61.77 -169.37 REMARK 500 4 THR A 4 -41.50 -167.73 REMARK 500 4 ILE A 5 -125.19 34.81 REMARK 500 4 PHE A 6 -84.42 67.14 REMARK 500 4 HIS A 9 -178.11 79.95 REMARK 500 4 LEU A 10 94.46 75.68 REMARK 500 4 THR A 12 -103.40 61.34 REMARK 500 4 ASN A 13 95.51 39.09 REMARK 500 4 PRO A 55 81.39 -69.26 REMARK 500 4 ILE A 56 -25.50 -159.08 REMARK 500 4 GLN A 57 -31.06 -161.63 REMARK 500 4 ALA A 61 129.38 84.15 REMARK 500 4 ASN A 65 -43.71 69.70 REMARK 500 4 THR A 67 -93.92 -175.13 REMARK 500 4 ALA A 69 116.66 84.01 REMARK 500 4 GLU A 71 -36.49 -173.43 REMARK 500 4 HIS A 72 87.88 -57.51 REMARK 500 4 HIS A 76 152.76 62.19 REMARK 500 5 PHE A 6 -177.31 59.09 REMARK 500 5 ASN A 7 -68.58 75.29 REMARK 500 5 LEU A 10 -34.13 76.21 REMARK 500 5 ASN A 11 -152.05 59.15 REMARK 500 5 ARG A 52 42.54 74.59 REMARK 500 5 MET A 53 28.96 46.40 REMARK 500 5 PRO A 55 109.28 -46.44 REMARK 500 5 ILE A 56 161.68 66.50 REMARK 500 5 GLN A 57 -39.19 80.46 REMARK 500 5 ALA A 61 162.61 65.02 REMARK 500 5 ALA A 63 -68.81 98.31 REMARK 500 5 ILE A 66 144.08 81.15 REMARK 500 5 ALA A 69 -60.17 85.31 REMARK 500 5 LEU A 70 100.97 67.61 REMARK 500 5 GLU A 71 176.63 82.97 REMARK 500 5 HIS A 73 -74.29 -63.62 REMARK 500 6 ASP A 2 48.67 -73.46 REMARK 500 6 LYS A 3 96.18 -162.38 REMARK 500 6 ILE A 5 -153.14 41.73 REMARK 500 6 PHE A 6 164.51 59.67 REMARK 500 6 ASP A 8 118.38 -166.62 REMARK 500 6 LEU A 10 -72.75 71.28 REMARK 500 6 THR A 12 -138.16 60.33 REMARK 500 6 ASN A 13 128.56 73.53 REMARK 500 6 MET A 53 36.63 -152.17 REMARK 500 6 GLU A 58 134.70 79.85 REMARK 500 6 GLN A 60 54.48 -147.67 REMARK 500 6 PRO A 62 92.36 -51.52 REMARK 500 6 ILE A 66 -33.56 -170.64 REMARK 500 6 THR A 67 -167.85 -176.81 REMARK 500 6 LEU A 70 -72.97 83.17 REMARK 500 6 GLU A 71 -94.87 28.96 REMARK 500 6 HIS A 72 -27.69 -146.04 REMARK 500 6 HIS A 73 158.09 68.53 REMARK 500 6 HIS A 75 -72.78 67.36 REMARK 500 6 HIS A 76 98.32 62.96 REMARK 500 7 ASP A 2 94.35 -64.08 REMARK 500 7 ILE A 5 34.57 35.66 REMARK 500 7 PHE A 6 23.22 49.05 REMARK 500 7 ASP A 8 94.61 72.78 REMARK 500 7 HIS A 9 -30.87 83.62 REMARK 500 7 LEU A 10 105.60 60.61 REMARK 500 7 ASN A 11 -95.77 -106.98 REMARK 500 7 ASN A 13 -59.53 -166.87 REMARK 500 7 THR A 16 -96.13 27.49 REMARK 500 7 ALA A 33 -70.13 -55.85 REMARK 500 7 MET A 53 -41.24 -162.12 REMARK 500 7 ILE A 56 54.16 -154.32 REMARK 500 7 GLN A 57 -29.38 82.60 REMARK 500 7 GLN A 60 90.67 61.63 REMARK 500 7 PRO A 64 82.33 -58.53 REMARK 500 7 ILE A 66 89.06 -166.97 REMARK 500 7 THR A 67 -158.99 36.83 REMARK 500 7 ALA A 69 -178.33 -176.02 REMARK 500 7 LEU A 70 57.57 -173.35 REMARK 500 7 GLU A 71 -51.69 -174.29 REMARK 500 7 HIS A 72 -175.47 61.78 REMARK 500 REMARK 500 REMARK: NULL

DBREF 2DW3 A 1 71 UNP P13402 PUFX_RHOS4 2 72

SEQADV 2DW3 HIS A 72 UNP P13402 EXPRESSION TAG SEQADV 2DW3 HIS A 73 UNP P13402 EXPRESSION TAG SEQADV 2DW3 HIS A 74 UNP P13402 EXPRESSION TAG SEQADV 2DW3 HIS A 75 UNP P13402 EXPRESSION TAG SEQADV 2DW3 HIS A 76 UNP P13402 EXPRESSION TAG SEQADV 2DW3 HIS A 77 UNP P13402 EXPRESSION TAG

SEQRES 1 A 77 ALA ASP LYS THR ILE PHE ASN ASP HIS LEU ASN THR ASN SEQRES 2 A 77 PRO LYS THR ASN LEU ARG LEU TRP VAL ALA PHE GLN MET SEQRES 3 A 77 MET LYS GLY ALA GLY TRP ALA GLY GLY VAL PHE PHE GLY SEQRES 4 A 77 THR LEU LEU LEU ILE GLY PHE PHE ARG VAL VAL GLY ARG SEQRES 5 A 77 MET LEU PRO ILE GLN GLU ASN GLN ALA PRO ALA PRO ASN SEQRES 6 A 77 ILE THR GLY ALA LEU GLU HIS HIS HIS HIS HIS HIS

HELIX 1 1 ASN A 13 MET A 53 1 41

CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1

ORIGX1 1.000000 0.000000 0.000000 0.00000

ORIGX2 0.000000 1.000000 0.000000 0.00000

ORIGX3 0.000000 0.000000 1.000000 0.00000

SCALE1 1.000000 0.000000 0.000000 0.00000

SCALE2 0.000000 1.000000 0.000000 0.00000

SCALE3 0.000000 0.000000 1.000000 0.00000