10 20 30 40 50 60 70 80 2DVH - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER ELECTRON TRANSPORT 25-MAR-98 2DVH
TITLE THE Y64A MUTANT OF CYTOCHROME C553 FROM DESULFOVIBRIO TITLE 2 VULGARIS HILDENBOROUGH, NMR, 39 STRUCTURES
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C-553; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOVIBRIO VULGARIS SUBSP. SOURCE 3 VULGARIS STR. HILDENBOROUGH; SOURCE 4 ORGANISM_TAXID: 882; SOURCE 5 STRAIN: HILDENBOROUGH / ATCC 29579 / NCIMB 8303; SOURCE 6 CELLULAR_LOCATION: PERIPLASM; SOURCE 7 GENE: M13CYF; SOURCE 8 EXPRESSION_SYSTEM: DESULFOVIBRIO DESULFURICANS; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 876; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: G200; SOURCE 11 EXPRESSION_SYSTEM_CELLULAR_LOCATION: PERIPLASM; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PRC41/TYR64ALA; SOURCE 13 EXPRESSION_SYSTEM_GENE: CYF
KEYWDS ELECTRON TRANSPORT, CYTOCHROME C, HEME
EXPDTA SOLUTION NMR
NUMMDL 39
AUTHOR C.SEBBAN-KREUZER,M.J.BLACKLEDGE,A.DOLLA,D.MARION, AUTHOR 2 F.GUERLESQUIN
REVDAT 2 24-FEB-09 2DVH 1 VERSN REVDAT 1 17-JUN-98 2DVH 0
JRNL AUTH M.J.BLACKLEDGE,S.MEDVEDEVA,M.PONCIN,F.GUERLESQUIN, JRNL AUTH 2 M.BRUSCHI,D.MARION JRNL TITL STRUCTURE AND DYNAMICS OF FERROCYTOCHROME C553 JRNL TITL 2 FROM DESULFOVIBRIO VULGARIS STUDIED BY NMR JRNL TITL 3 SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS. JRNL REF J.MOL.BIOL. V. 245 661 1995 JRNL REFN ISSN 0022-2836 JRNL PMID 7844834 JRNL DOI 10.1006/JMBI.1994.0054
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DISCOVER REMARK 3 AUTHORS : BIOSYM REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DVH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 5.9 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NOESY, HOHAHA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AMX600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : MSI DISCOVER DISCOVER REMARK 210 METHOD USED : SIMULATED ANNEALING AND REMARK 210 RESTRAINED MOLECULAR DYNAMICS REMARK 210 ENERGY REFINEMENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 40 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 39 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 14 ARG A 53 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 16 -72.98 -64.37 REMARK 500 1 SER A 19 -4.57 -141.06 REMARK 500 1 ALA A 22 -139.38 -85.40 REMARK 500 1 LYS A 30 92.80 -20.08 REMARK 500 1 ASP A 66 -55.36 -157.67 REMARK 500 2 ASP A 2 -149.86 60.36 REMARK 500 2 LYS A 20 45.40 -78.70 REMARK 500 2 ALA A 21 -113.04 53.62 REMARK 500 2 ALA A 22 -159.32 -161.49 REMARK 500 2 LYS A 30 -96.91 39.12 REMARK 500 2 GLU A 52 -76.59 -60.40 REMARK 500 2 SER A 77 30.73 -73.93 REMARK 500 2 LYS A 78 34.66 -153.64 REMARK 500 3 ALA A 16 46.13 -76.72 REMARK 500 3 ASP A 17 -47.13 179.93 REMARK 500 3 LYS A 20 31.66 -66.71 REMARK 500 3 ALA A 21 21.93 45.57 REMARK 500 3 ALA A 22 -123.67 33.88 REMARK 500 3 MET A 23 79.68 -68.37 REMARK 500 3 SER A 25 46.30 -151.13 REMARK 500 3 LYS A 30 99.57 -37.95 REMARK 500 3 GLU A 52 -87.79 -77.78 REMARK 500 4 ASP A 2 84.09 -39.84 REMARK 500 4 ALA A 16 -70.19 64.67 REMARK 500 4 ASP A 17 31.02 -80.36 REMARK 500 4 ALA A 22 -131.11 -88.31 REMARK 500 4 LYS A 30 87.95 -29.88 REMARK 500 4 SER A 48 -71.40 -100.62 REMARK 500 4 LYS A 78 41.87 -106.74 REMARK 500 5 ASP A 2 -101.63 -155.33 REMARK 500 5 ASP A 17 36.93 -90.40 REMARK 500 5 ALA A 21 41.21 -76.50 REMARK 500 5 ALA A 22 -142.34 44.46 REMARK 500 5 LYS A 30 89.28 -27.80 REMARK 500 5 GLU A 52 -118.41 42.30 REMARK 500 6 ILE A 11 151.18 -47.52 REMARK 500 6 ALA A 16 -70.15 -111.97 REMARK 500 6 ASP A 17 49.91 -84.71 REMARK 500 6 ALA A 21 41.93 -80.24 REMARK 500 6 ALA A 22 -114.88 -27.12 REMARK 500 6 MET A 23 91.99 -61.69 REMARK 500 6 LYS A 30 99.28 -36.45 REMARK 500 6 SER A 48 -65.40 -93.33 REMARK 500 6 GLU A 52 -114.47 34.06 REMARK 500 7 ALA A 22 -122.82 -79.66 REMARK 500 7 MET A 23 83.42 -69.10 REMARK 500 7 SER A 25 57.81 -69.34 REMARK 500 8 ASP A 2 39.37 34.57 REMARK 500 8 SER A 25 -28.14 -163.73 REMARK 500 8 GLU A 52 -107.20 46.95 REMARK 500 9 ASP A 17 45.57 -80.49 REMARK 500 9 SER A 19 -109.06 -121.89 REMARK 500 9 LYS A 20 110.93 41.06 REMARK 500 9 ALA A 22 -91.45 -64.65 REMARK 500 9 SER A 25 69.20 -64.59 REMARK 500 9 PRO A 28 93.96 -69.94 REMARK 500 9 VAL A 29 -47.03 -27.90 REMARK 500 9 LYS A 30 95.04 -31.47 REMARK 500 9 ALA A 64 -169.32 -78.64 REMARK 500 10 ASP A 17 76.75 -157.95 REMARK 500 10 SER A 19 85.44 67.74 REMARK 500 10 ALA A 22 -172.10 -66.79 REMARK 500 10 MET A 23 111.71 -23.89 REMARK 500 10 LYS A 30 99.45 -37.65 REMARK 500 10 GLU A 52 -100.45 44.71 REMARK 500 10 ALA A 64 -158.53 -88.32 REMARK 500 10 SER A 65 -86.82 -143.97 REMARK 500 10 ASP A 66 -54.36 -144.02 REMARK 500 11 ASP A 2 66.03 34.77 REMARK 500 11 LEU A 6 -55.74 -144.45 REMARK 500 11 ALA A 16 -81.58 -58.54 REMARK 500 11 ASP A 17 48.38 -83.96 REMARK 500 11 SER A 25 97.01 -62.57 REMARK 500 11 VAL A 29 -54.58 -23.40 REMARK 500 11 LYS A 30 -92.88 26.63 REMARK 500 11 GLU A 52 -98.33 47.54 REMARK 500 11 ALA A 55 -64.83 -132.13 REMARK 500 11 SER A 77 3.41 -66.46 REMARK 500 12 ALA A 16 -75.51 -66.19 REMARK 500 12 ALA A 22 -135.86 -83.30 REMARK 500 12 LYS A 30 105.27 -35.58 REMARK 500 12 GLN A 32 -169.51 -67.70 REMARK 500 12 SER A 48 -65.39 -91.41 REMARK 500 12 GLU A 52 -103.74 40.82 REMARK 500 13 ALA A 16 -62.79 -103.50 REMARK 500 13 ALA A 22 -105.28 -54.44 REMARK 500 13 SER A 25 66.05 -64.89 REMARK 500 13 LYS A 30 89.45 -31.54 REMARK 500 13 GLU A 52 -101.03 48.81 REMARK 500 13 ALA A 55 -68.65 -131.77 REMARK 500 13 LYS A 78 37.12 -146.24 REMARK 500 14 ASP A 17 43.88 -108.49 REMARK 500 14 ALA A 22 -128.55 -89.63 REMARK 500 14 MET A 23 76.56 -69.91 REMARK 500 14 SER A 25 70.88 -62.07 REMARK 500 14 LYS A 30 95.96 -35.82 REMARK 500 14 GLU A 52 -91.44 33.44 REMARK 500 14 LYS A 78 48.91 -147.21 REMARK 500 15 ASP A 2 -160.70 174.99 REMARK 500 15 ALA A 22 132.71 -27.29 REMARK 500 15 MET A 23 -75.39 60.19 REMARK 500 15 SER A 25 76.64 66.50 REMARK 500 15 LYS A 30 88.92 -28.16 REMARK 500 15 GLU A 52 -77.01 -44.35 REMARK 500 16 LYS A 8 -39.58 -39.73 REMARK 500 16 ASP A 17 41.52 -100.64 REMARK 500 16 ALA A 22 -119.48 -77.43 REMARK 500 16 VAL A 29 -53.51 -22.23 REMARK 500 16 LYS A 30 85.48 -17.18 REMARK 500 17 ALA A 16 -69.75 65.22 REMARK 500 17 SER A 19 43.06 -79.25 REMARK 500 17 ALA A 22 -148.78 -79.53 REMARK 500 17 LYS A 30 98.95 -42.30 REMARK 500 17 GLU A 52 -79.25 -62.78 REMARK 500 18 SER A 9 36.51 -87.82 REMARK 500 18 CYS A 10 -33.31 -143.42 REMARK 500 18 ILE A 11 156.75 -45.73 REMARK 500 18 ASP A 17 -103.03 -159.26 REMARK 500 18 ALA A 22 -135.78 25.13 REMARK 500 18 LYS A 30 101.38 -38.47 REMARK 500 18 SER A 48 -67.39 -95.36 REMARK 500 18 ALA A 55 -57.04 -20.78 REMARK 500 19 ASP A 17 -71.04 -81.45 REMARK 500 19 SER A 25 104.46 -170.06 REMARK 500 19 LYS A 30 100.30 -33.34 REMARK 500 19 LEU A 37 -70.31 -50.71 REMARK 500 19 GLU A 52 -110.46 29.44 REMARK 500 19 SER A 65 -79.20 -79.18 REMARK 500 19 ASP A 66 -61.91 -151.57 REMARK 500 19 LYS A 78 53.41 -112.02 REMARK 500 20 ASP A 17 -80.97 -82.79 REMARK 500 20 ALA A 22 -178.35 -67.91 REMARK 500 20 MET A 23 129.25 -37.92 REMARK 500 20 LYS A 30 105.40 -47.29 REMARK 500 20 SER A 48 -61.91 -93.09 REMARK 500 20 GLU A 52 -101.18 42.84 REMARK 500 21 ASP A 2 41.10 -73.12 REMARK 500 21 ALA A 22 171.55 -48.84 REMARK 500 21 MET A 23 99.18 -17.74 REMARK 500 21 LYS A 30 90.91 -23.42 REMARK 500 21 GLU A 52 -103.78 37.00 REMARK 500 21 LYS A 78 50.00 -143.30 REMARK 500 22 ASP A 2 68.62 4.99 REMARK 500 22 SER A 9 37.35 -91.92 REMARK 500 22 CYS A 10 -32.91 -138.24 REMARK 500 22 ILE A 11 153.42 -47.40 REMARK 500 22 ALA A 16 30.27 -145.48 REMARK 500 22 ASP A 17 -103.17 -161.16 REMARK 500 22 ALA A 22 -122.24 -77.54 REMARK 500 22 MET A 23 75.75 -69.35 REMARK 500 22 SER A 25 101.92 -40.92 REMARK 500 22 LYS A 30 101.37 -43.96 REMARK 500 22 LYS A 78 38.89 -142.77 REMARK 500 23 ASP A 17 34.30 -83.68 REMARK 500 23 LYS A 20 37.67 -79.80 REMARK 500 23 ALA A 21 -113.91 53.74 REMARK 500 23 MET A 23 108.89 -42.90 REMARK 500 23 LYS A 30 98.93 -27.12 REMARK 500 23 SER A 65 -77.41 -146.49 REMARK 500 23 ASP A 66 -51.95 -153.75 REMARK 500 24 ALA A 16 -110.28 48.47 REMARK 500 24 ALA A 22 -175.49 -63.36 REMARK 500 24 MET A 23 119.66 -30.91 REMARK 500 24 LYS A 30 85.84 -19.98 REMARK 500 24 ALA A 55 -55.30 -26.90 REMARK 500 25 ASP A 2 106.40 60.71 REMARK 500 25 ALA A 16 -85.43 -76.81 REMARK 500 25 SER A 19 49.47 -84.66 REMARK 500 25 ALA A 22 -175.13 -65.58 REMARK 500 25 MET A 23 87.06 -64.63 REMARK 500 25 LYS A 30 96.83 -23.17 REMARK 500 25 GLU A 52 -127.63 -84.80 REMARK 500 26 ASP A 17 32.29 -85.66 REMARK 500 26 SER A 19 -9.56 -142.01 REMARK 500 26 ALA A 21 91.11 -66.75 REMARK 500 26 SER A 25 165.67 65.93 REMARK 500 26 LYS A 30 95.66 -27.64 REMARK 500 26 GLU A 52 -131.89 49.32 REMARK 500 27 ASP A 2 -65.69 -172.00 REMARK 500 27 ALA A 21 92.38 -69.18 REMARK 500 27 SER A 25 80.78 -171.57 REMARK 500 27 LYS A 30 65.37 5.13 REMARK 500 27 GLU A 52 -92.40 35.93 REMARK 500 28 TYR A 7 -39.75 -38.94 REMARK 500 28 ASP A 17 97.58 72.39 REMARK 500 28 ALA A 22 -129.08 -83.04 REMARK 500 28 LYS A 30 108.33 -47.43 REMARK 500 28 GLU A 52 -98.96 29.92 REMARK 500 28 SER A 65 -84.44 -82.49 REMARK 500 28 ASP A 66 -53.49 -155.48 REMARK 500 29 ASP A 17 33.98 -90.14 REMARK 500 29 LYS A 20 -177.70 48.36 REMARK 500 29 ALA A 21 37.22 -171.16 REMARK 500 29 LYS A 30 100.93 -30.95 REMARK 500 29 ARG A 53 -33.12 70.82 REMARK 500 29 LYS A 54 42.54 72.18 REMARK 500 29 ALA A 55 -66.05 -17.24 REMARK 500 29 LYS A 78 41.81 -141.78 REMARK 500 30 ALA A 16 -71.02 -72.04 REMARK 500 30 ASP A 17 49.17 -84.03 REMARK 500 30 ALA A 21 48.77 -75.59 REMARK 500 30 ALA A 22 -168.47 56.48 REMARK 500 30 SER A 25 54.84 -153.05 REMARK 500 30 LYS A 30 101.34 -35.74 REMARK 500 30 GLU A 52 37.98 -79.52 REMARK 500 30 ARG A 53 -32.53 68.43 REMARK 500 30 LYS A 54 36.76 75.41 REMARK 500 30 ALA A 55 -64.06 -19.95 REMARK 500 30 ASP A 66 -59.90 -158.73 REMARK 500 30 LYS A 78 55.96 -143.19 REMARK 500 31 ALA A 16 49.67 -80.23 REMARK 500 31 ASP A 17 -54.55 -178.17 REMARK 500 31 SER A 19 -66.99 -103.67 REMARK 500 31 ALA A 21 72.41 -63.67 REMARK 500 31 MET A 23 -64.17 64.12 REMARK 500 31 LYS A 30 101.51 -46.78 REMARK 500 31 ARG A 53 -26.86 65.46 REMARK 500 31 LYS A 54 41.54 72.16 REMARK 500 31 ALA A 55 -67.61 -17.08 REMARK 500 31 LYS A 78 45.01 -141.33 REMARK 500 32 ASP A 2 37.56 -72.84 REMARK 500 32 LYS A 8 -18.29 -48.99 REMARK 500 32 ALA A 16 -80.41 -69.59 REMARK 500 32 SER A 19 48.43 -79.18 REMARK 500 32 ALA A 22 -132.85 -76.82 REMARK 500 32 MET A 23 73.63 -69.81 REMARK 500 32 LYS A 30 89.22 -25.94 REMARK 500 32 SER A 48 -63.20 -94.87 REMARK 500 33 ASP A 2 90.63 -54.43 REMARK 500 33 ASP A 17 33.38 -85.93 REMARK 500 33 ALA A 21 44.24 -77.64 REMARK 500 33 ALA A 22 -134.97 24.59 REMARK 500 33 SER A 25 68.53 79.02 REMARK 500 33 LYS A 30 93.92 -29.56 REMARK 500 33 GLU A 52 -54.83 -11.63 REMARK 500 34 ALA A 22 175.35 -59.82 REMARK 500 34 MET A 23 128.79 -30.84 REMARK 500 34 LYS A 30 86.97 -21.09 REMARK 500 34 SER A 48 -70.46 -108.86 REMARK 500 34 GLU A 52 -91.46 -6.30 REMARK 500 34 LYS A 62 81.82 -10.82 REMARK 500 34 LYS A 78 48.03 -140.67 REMARK 500 35 ALA A 5 48.66 -83.04 REMARK 500 35 LEU A 6 -58.02 -147.54 REMARK 500 35 ALA A 16 -72.15 -47.11 REMARK 500 35 ASP A 17 36.02 -86.62 REMARK 500 35 ALA A 22 -129.38 -90.30 REMARK 500 35 SER A 25 64.85 -69.28 REMARK 500 35 GLU A 52 -133.50 -84.61 REMARK 500 35 VAL A 61 40.12 -86.95 REMARK 500 35 LYS A 62 -69.17 -17.37 REMARK 500 35 LYS A 78 50.19 -140.74 REMARK 500 36 ALA A 16 -77.99 -163.13 REMARK 500 36 LYS A 20 -141.41 41.42 REMARK 500 36 ALA A 21 62.90 143.62 REMARK 500 36 ALA A 22 -127.93 -86.21 REMARK 500 36 LYS A 30 94.89 -31.86 REMARK 500 36 SER A 48 -77.44 -120.21 REMARK 500 36 GLU A 52 -103.66 49.20 REMARK 500 36 LYS A 62 83.64 -14.16 REMARK 500 36 LYS A 78 45.68 -142.67 REMARK 500 37 ALA A 16 -71.72 -54.64 REMARK 500 37 ALA A 22 -90.67 -65.44 REMARK 500 37 LYS A 30 93.52 -29.31 REMARK 500 37 GLU A 52 -93.14 -50.55 REMARK 500 37 ALA A 55 -65.16 -10.57 REMARK 500 38 ASP A 17 -85.61 -159.06 REMARK 500 38 ALA A 22 -142.76 -77.55 REMARK 500 38 MET A 23 83.30 -67.32 REMARK 500 38 SER A 25 109.42 -50.41 REMARK 500 38 LYS A 30 106.19 -55.03 REMARK 500 38 SER A 48 -67.92 -98.10 REMARK 500 39 ASP A 2 45.35 -73.19 REMARK 500 39 SER A 9 37.62 -95.81 REMARK 500 39 CYS A 10 -46.06 -142.33 REMARK 500 39 ASP A 17 -98.98 -81.73 REMARK 500 39 SER A 19 1.90 -152.88 REMARK 500 39 ALA A 22 -133.35 -88.25 REMARK 500 39 LYS A 30 94.47 -37.69 REMARK 500 39 GLU A 52 -145.04 -75.41 REMARK 500 39 LYS A 78 57.74 -142.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 TYR A 7 0.08 SIDE_CHAIN REMARK 500 1 TYR A 75 0.07 SIDE_CHAIN REMARK 500 2 TYR A 7 0.08 SIDE_CHAIN REMARK 500 3 TYR A 7 0.11 SIDE_CHAIN REMARK 500 5 TYR A 7 0.10 SIDE_CHAIN REMARK 500 7 TYR A 7 0.12 SIDE_CHAIN REMARK 500 8 TYR A 7 0.12 SIDE_CHAIN REMARK 500 8 TYR A 38 0.06 SIDE_CHAIN REMARK 500 8 TYR A 44 0.10 SIDE_CHAIN REMARK 500 9 TYR A 49 0.07 SIDE_CHAIN REMARK 500 10 TYR A 7 0.07 SIDE_CHAIN REMARK 500 10 TYR A 49 0.07 SIDE_CHAIN REMARK 500 11 TYR A 7 0.08 SIDE_CHAIN REMARK 500 14 TYR A 7 0.08 SIDE_CHAIN REMARK 500 14 TYR A 44 0.08 SIDE_CHAIN REMARK 500 14 ARG A 53 0.08 SIDE_CHAIN REMARK 500 15 TYR A 7 0.11 SIDE_CHAIN REMARK 500 16 TYR A 7 0.09 SIDE_CHAIN REMARK 500 17 TYR A 44 0.07 SIDE_CHAIN REMARK 500 19 TYR A 7 0.10 SIDE_CHAIN REMARK 500 20 TYR A 7 0.11 SIDE_CHAIN REMARK 500 20 TYR A 75 0.08 SIDE_CHAIN REMARK 500 22 TYR A 7 0.13 SIDE_CHAIN REMARK 500 22 TYR A 75 0.06 SIDE_CHAIN REMARK 500 23 TYR A 7 0.07 SIDE_CHAIN REMARK 500 23 TYR A 38 0.09 SIDE_CHAIN REMARK 500 24 TYR A 7 0.09 SIDE_CHAIN REMARK 500 25 TYR A 38 0.06 SIDE_CHAIN REMARK 500 28 TYR A 7 0.09 SIDE_CHAIN REMARK 500 29 TYR A 44 0.10 SIDE_CHAIN REMARK 500 30 TYR A 7 0.10 SIDE_CHAIN REMARK 500 30 TYR A 44 0.11 SIDE_CHAIN REMARK 500 30 TYR A 49 0.07 SIDE_CHAIN REMARK 500 31 TYR A 7 0.08 SIDE_CHAIN REMARK 500 31 TYR A 38 0.08 SIDE_CHAIN REMARK 500 31 TYR A 44 0.10 SIDE_CHAIN REMARK 500 31 ARG A 53 0.15 SIDE_CHAIN REMARK 500 32 TYR A 44 0.14 SIDE_CHAIN REMARK 500 32 TYR A 49 0.18 SIDE_CHAIN REMARK 500 33 TYR A 7 0.10 SIDE_CHAIN REMARK 500 33 TYR A 44 0.17 SIDE_CHAIN REMARK 500 33 TYR A 49 0.15 SIDE_CHAIN REMARK 500 34 TYR A 7 0.12 SIDE_CHAIN REMARK 500 35 TYR A 44 0.13 SIDE_CHAIN REMARK 500 37 TYR A 7 0.10 SIDE_CHAIN REMARK 500 39 TYR A 7 0.09 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL
REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 1 HEC A 80 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 14 NE2 REMARK 620 2 MET A 57 SD 173.6 REMARK 620 N 1
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: HEC REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: HEM BINDING SITE. REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEC A 80
DBREF 2DVH A 1 79 UNP P04032 CY553_DESVH 25 103
SEQADV 2DVH ALA A 64 UNP P04032 TYR 88 ENGINEERED
SEQRES 1 A 79 ALA ASP GLY ALA ALA LEU TYR LYS SER CYS ILE GLY CYS SEQRES 2 A 79 HIS GLY ALA ASP GLY SER LYS ALA ALA MET GLY SER ALA SEQRES 3 A 79 LYS PRO VAL LYS GLY GLN GLY ALA GLU GLU LEU TYR LYS SEQRES 4 A 79 LYS MET LYS GLY TYR ALA ASP GLY SER TYR GLY GLY GLU SEQRES 5 A 79 ARG LYS ALA MET MET THR ASN ALA VAL LYS LYS ALA SER SEQRES 6 A 79 ASP GLU GLU LEU LYS ALA LEU ALA ASP TYR MET SER LYS SEQRES 7 A 79 LEU
HET HEC A 80 75
HETNAM HEC HEME C
FORMUL 2 HEC C34 H34 FE N4 O4
HELIX 1 H1 ASP A 2 CYS A 10 1 9 HELIX 2 H2 ALA A 34 ALA A 45 1 12 HELIX 3 H3 ALA A 55 VAL A 61 1 7 HELIX 4 H4 ASP A 66 LEU A 79 1 14
LINK FE HEC A 80 NE2 HIS A 14 1555 1555 2.04 LINK FE HEC A 80 SD MET A 57 1555 1555 2.34 LINK CAB HEC A 80 SG CYS A 10 1555 1555 1.84 LINK CAC HEC A 80 SG CYS A 13 1555 1555 1.82
SITE 1 HEC 4 CYS A 10 CYS A 13 HIS A 14 MET A 57 SITE 1 AC1 17 CYS A 10 CYS A 13 HIS A 14 ALA A 22 SITE 2 AC1 17 ALA A 26 LYS A 27 VAL A 29 GLN A 32 SITE 3 AC1 17 LEU A 37 LYS A 40 TYR A 44 TYR A 49 SITE 4 AC1 17 ARG A 53 MET A 56 MET A 57 VAL A 61 SITE 5 AC1 17 LEU A 72
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000