10 20 30 40 50 60 70 80 2DTX - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER OXIDOREDUCTASE 18-JUL-06 2DTX
TITLE STRUCTURE OF THERMOPLASMA ACIDOPHILUM ALDOHEXOSE TITLE 2 DEHYDROGENASE (ALDT) IN COMPLEX WITH D-MANNOSE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE 1-DEHYDROGENASE RELATED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALDOHEXOSE DEHYDROGENASE; COMPND 5 EC: 1.1.1.118; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOPLASMA ACIDOPHILUM; SOURCE 3 ORGANISM_TAXID: 2303; SOURCE 4 GENE: TA0754; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A
KEYWDS ROSSMANN FOLD, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR Y.YASUTAKE,Y.NISHIYA,N.TAMURA,T.TAMURA
REVDAT 2 24-FEB-09 2DTX 1 VERSN REVDAT 1 27-MAR-07 2DTX 0
JRNL AUTH Y.YASUTAKE,Y.NISHIYA,N.TAMURA,T.TAMURA JRNL TITL STRUCTURAL INSIGHTS INTO UNIQUE SUBSTRATE JRNL TITL 2 SELECTIVITY OF THERMOPLASMA JRNL TITL 3 ACIDOPHILUMD-ALDOHEXOSE DEHYDROGENASE JRNL REF J.MOL.BIOL. V. 367 1034 2007 JRNL REFN ISSN 0022-2836 JRNL PMID 17300803 JRNL DOI 10.1016/J.JMB.2007.01.029
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 71296 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3604 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.59 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 6591 REMARK 3 BIN R VALUE (WORKING SET) : 0.2466 REMARK 3 BIN FREE R VALUE : 0.2907 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 365 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3945 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 381 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.00500 REMARK 3 B22 (A**2) : -2.00500 REMARK 3 B33 (A**2) : 4.01000 REMARK 3 B12 (A**2) : -0.99100 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : 0.13 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.16 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.43 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.75 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.06 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.150 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.770 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.980 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.930 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 45.02 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DTX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JUL-06. REMARK 100 THE RCSB ID CODE IS RCSB025838.
REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71448 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 34.6480 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 6.739 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2DTE REMARK 200 REMARK 200 REMARK: NULL
REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG 3350, 0.2M AMMONIUM REMARK 280 SULFATE, 20% GLYCEROL, 0.1M SODIUM ACETATE, 4MM NADH, 0.1M D- REMARK 280 MANNOSE, PH 4.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K
REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.18600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.09300 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.09300 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 92.18600 REMARK 290 REMARK 290 REMARK: NULL
REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA.
REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -198.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 46.09300
REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 LEU A 256 REMARK 465 GLU A 257 REMARK 465 HIS A 258 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 MET B 0 REMARK 465 LEU B 256 REMARK 465 GLU B 257 REMARK 465 HIS B 258 REMARK 465 HIS B 259 REMARK 465 HIS B 260 REMARK 465 HIS B 261 REMARK 465 HIS B 262 REMARK 465 HIS B 263
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C1 BMA B 302 O HOH B 772 1.89 REMARK 500 C1 BMA A 301 O HOH A 771 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 7 -3.01 69.12 REMARK 500 PRO A 42 0.76 -66.07 REMARK 500 ASN A 80 -30.46 -135.05 REMARK 500 SER A 131 -123.07 -101.49 REMARK 500 SER A 136 -69.41 -121.52 REMARK 500 ALA A 175 -135.98 -91.07 REMARK 500 VAL A 241 78.88 -118.53 REMARK 500 ASP B 7 -1.08 68.87 REMARK 500 ASN B 80 -32.75 -133.33 REMARK 500 SER B 131 -123.26 -100.90 REMARK 500 SER B 136 -69.46 -124.51 REMARK 500 ALA B 175 -138.70 -91.16 REMARK 500 VAL B 241 77.03 -117.99 REMARK 500 PRO B 250 42.33 -79.74 REMARK 500 REMARK 500 REMARK: NULL
REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 BMA A 301 REMARK 610 BMA B 302
REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA A 301 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 351 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BMA B 302 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 352
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2DTD RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN LIGAND-FREE FORM. REMARK 900 RELATED ID: 2DTE RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH NADH.
DBREF 2DTX A 2 255 UNP Q9HK51 Q9HK51_THEAC 2 255 DBREF 2DTX B 2 255 UNP Q9HK51 Q9HK51_THEAC 2 255
SEQADV 2DTX MET A 0 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX GLY A 1 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX LEU A 256 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX GLU A 257 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS A 258 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS A 259 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS A 260 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS A 261 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS A 262 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS A 263 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX MET B 0 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX GLY B 1 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX LEU B 256 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX GLU B 257 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS B 258 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS B 259 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS B 260 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS B 261 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS B 262 UNP Q9HK51 EXPRESSION TAG SEQADV 2DTX HIS B 263 UNP Q9HK51 EXPRESSION TAG
SEQRES 1 A 264 MET GLY PHE SER ASP LEU ARG ASP LYS VAL VAL ILE VAL SEQRES 2 A 264 THR GLY ALA SER MET GLY ILE GLY ARG ALA ILE ALA GLU SEQRES 3 A 264 ARG PHE VAL ASP GLU GLY SER LYS VAL ILE ASP LEU SER SEQRES 4 A 264 ILE HIS ASP PRO GLY GLU ALA LYS TYR ASP HIS ILE GLU SEQRES 5 A 264 CYS ASP VAL THR ASN PRO ASP GLN VAL LYS ALA SER ILE SEQRES 6 A 264 ASP HIS ILE PHE LYS GLU TYR GLY SER ILE SER VAL LEU SEQRES 7 A 264 VAL ASN ASN ALA GLY ILE GLU SER TYR GLY LYS ILE GLU SEQRES 8 A 264 SER MET SER MET GLY GLU TRP ARG ARG ILE ILE ASP VAL SEQRES 9 A 264 ASN LEU PHE GLY TYR TYR TYR ALA SER LYS PHE ALA ILE SEQRES 10 A 264 PRO TYR MET ILE ARG SER ARG ASP PRO SER ILE VAL ASN SEQRES 11 A 264 ILE SER SER VAL GLN ALA SER ILE ILE THR LYS ASN ALA SEQRES 12 A 264 SER ALA TYR VAL THR SER LYS HIS ALA VAL ILE GLY LEU SEQRES 13 A 264 THR LYS SER ILE ALA LEU ASP TYR ALA PRO LEU LEU ARG SEQRES 14 A 264 CYS ASN ALA VAL CYS PRO ALA THR ILE ASP THR PRO LEU SEQRES 15 A 264 VAL ARG LYS ALA ALA GLU LEU GLU VAL GLY SER ASP PRO SEQRES 16 A 264 MET ARG ILE GLU LYS LYS ILE SER GLU TRP GLY HIS GLU SEQRES 17 A 264 HIS PRO MET GLN ARG ILE GLY LYS PRO GLN GLU VAL ALA SEQRES 18 A 264 SER ALA VAL ALA PHE LEU ALA SER ARG GLU ALA SER PHE SEQRES 19 A 264 ILE THR GLY THR CYS LEU TYR VAL ASP GLY GLY LEU SER SEQRES 20 A 264 ILE ARG ALA PRO ILE SER THR PRO GLU LEU GLU HIS HIS SEQRES 21 A 264 HIS HIS HIS HIS SEQRES 1 B 264 MET GLY PHE SER ASP LEU ARG ASP LYS VAL VAL ILE VAL SEQRES 2 B 264 THR GLY ALA SER MET GLY ILE GLY ARG ALA ILE ALA GLU SEQRES 3 B 264 ARG PHE VAL ASP GLU GLY SER LYS VAL ILE ASP LEU SER SEQRES 4 B 264 ILE HIS ASP PRO GLY GLU ALA LYS TYR ASP HIS ILE GLU SEQRES 5 B 264 CYS ASP VAL THR ASN PRO ASP GLN VAL LYS ALA SER ILE SEQRES 6 B 264 ASP HIS ILE PHE LYS GLU TYR GLY SER ILE SER VAL LEU SEQRES 7 B 264 VAL ASN ASN ALA GLY ILE GLU SER TYR GLY LYS ILE GLU SEQRES 8 B 264 SER MET SER MET GLY GLU TRP ARG ARG ILE ILE ASP VAL SEQRES 9 B 264 ASN LEU PHE GLY TYR TYR TYR ALA SER LYS PHE ALA ILE SEQRES 10 B 264 PRO TYR MET ILE ARG SER ARG ASP PRO SER ILE VAL ASN SEQRES 11 B 264 ILE SER SER VAL GLN ALA SER ILE ILE THR LYS ASN ALA SEQRES 12 B 264 SER ALA TYR VAL THR SER LYS HIS ALA VAL ILE GLY LEU SEQRES 13 B 264 THR LYS SER ILE ALA LEU ASP TYR ALA PRO LEU LEU ARG SEQRES 14 B 264 CYS ASN ALA VAL CYS PRO ALA THR ILE ASP THR PRO LEU SEQRES 15 B 264 VAL ARG LYS ALA ALA GLU LEU GLU VAL GLY SER ASP PRO SEQRES 16 B 264 MET ARG ILE GLU LYS LYS ILE SER GLU TRP GLY HIS GLU SEQRES 17 B 264 HIS PRO MET GLN ARG ILE GLY LYS PRO GLN GLU VAL ALA SEQRES 18 B 264 SER ALA VAL ALA PHE LEU ALA SER ARG GLU ALA SER PHE SEQRES 19 B 264 ILE THR GLY THR CYS LEU TYR VAL ASP GLY GLY LEU SER SEQRES 20 B 264 ILE ARG ALA PRO ILE SER THR PRO GLU LEU GLU HIS HIS SEQRES 21 B 264 HIS HIS HIS HIS
HET BMA A 301 10 HET SO4 A 351 5 HET BMA B 302 10 HET SO4 B 352 5
HETNAM BMA BETA-D-MANNOSE HETNAM SO4 SULFATE ION
FORMUL 3 BMA 2(C6 H12 O6) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *381(H2 O)
HELIX 1 1 PHE A 2 ARG A 6 5 5 HELIX 2 2 MET A 17 GLU A 30 1 14 HELIX 3 3 ASN A 56 GLY A 72 1 17 HELIX 4 4 SER A 93 LEU A 105 1 13 HELIX 5 5 LEU A 105 ILE A 120 1 16 HELIX 6 6 SER A 132 SER A 136 5 5 HELIX 7 7 ALA A 142 ALA A 164 1 23 HELIX 8 8 THR A 179 GLY A 191 1 13 HELIX 9 9 ASP A 193 HIS A 208 1 16 HELIX 10 10 LYS A 215 SER A 228 1 14 HELIX 11 11 ARG A 229 SER A 232 5 4 HELIX 12 12 GLY A 244 ARG A 248 5 5 HELIX 13 13 PHE B 2 ARG B 6 5 5 HELIX 14 14 MET B 17 GLU B 30 1 14 HELIX 15 15 ASN B 56 GLY B 72 1 17 HELIX 16 16 SER B 93 LEU B 105 1 13 HELIX 17 17 LEU B 105 ILE B 120 1 16 HELIX 18 18 SER B 132 SER B 136 5 5 HELIX 19 19 ALA B 142 ALA B 164 1 23 HELIX 20 20 THR B 179 GLY B 191 1 13 HELIX 21 21 ASP B 193 HIS B 208 1 16 HELIX 22 22 LYS B 215 SER B 228 1 14 HELIX 23 23 ARG B 229 SER B 232 5 4 HELIX 24 24 GLY B 244 ARG B 248 5 5
SHEET 1 A 7 ASP A 48 GLU A 51 0 SHEET 2 A 7 LYS A 33 SER A 38 1 N VAL A 34 O ASP A 48 SHEET 3 A 7 VAL A 9 THR A 13 1 N VAL A 10 O LYS A 33 SHEET 4 A 7 VAL A 76 ASN A 79 1 O VAL A 78 N ILE A 11 SHEET 5 A 7 SER A 126 ILE A 130 1 O ILE A 130 N ASN A 79 SHEET 6 A 7 ARG A 168 PRO A 174 1 O ASN A 170 N ASN A 129 SHEET 7 A 7 CYS A 238 VAL A 241 1 O LEU A 239 N CYS A 173 SHEET 1 B 7 ASP B 48 GLU B 51 0 SHEET 2 B 7 LYS B 33 SER B 38 1 N ASP B 36 O ILE B 50 SHEET 3 B 7 VAL B 9 THR B 13 1 N VAL B 10 O LYS B 33 SHEET 4 B 7 VAL B 76 ASN B 79 1 O VAL B 76 N ILE B 11 SHEET 5 B 7 SER B 126 ILE B 130 1 O ILE B 130 N ASN B 79 SHEET 6 B 7 ARG B 168 PRO B 174 1 O ASN B 170 N ASN B 129 SHEET 7 B 7 CYS B 238 VAL B 241 1 O LEU B 239 N ALA B 171
SSBOND 1 CYS A 173 CYS A 238 1555 1555 2.04 SSBOND 2 CYS B 173 CYS B 238 1555 1555 2.04
CISPEP 1 ALA A 164 PRO A 165 0 -0.19 CISPEP 2 ALA B 164 PRO B 165 0 -0.03
SITE 1 AC1 10 GLU A 84 SER A 132 GLN A 134 TYR A 145 SITE 2 AC1 10 ALA A 175 THR A 176 LEU A 245 HOH A 633 SITE 3 AC1 10 HOH A 771 HOH A 773 SITE 1 AC2 8 MET A 17 GLY A 18 ILE A 19 GLY A 20 SITE 2 AC2 8 ASN A 80 HOH A 488 HOH A 506 HOH A 778 SITE 1 AC3 9 GLU B 84 SER B 132 GLN B 134 TYR B 145 SITE 2 AC3 9 ALA B 175 THR B 176 HOH B 551 HOH B 772 SITE 3 AC3 9 HOH B 774 SITE 1 AC4 9 MET B 17 GLY B 18 ILE B 19 GLY B 20 SITE 2 AC4 9 ASN B 80 LEU B 181 HOH B 494 HOH B 624 SITE 3 AC4 9 HOH B 664
CRYST1 81.879 81.879 138.279 90.00 90.00 120.00 P 32 2 1 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.012213 0.007051 0.000000 0.00000
SCALE2 0.000000 0.014103 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007232 0.00000