10 20 30 40 50 60 70 80 2DOD - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 28-APR-06 2DOD
TITLE SOLUTION STRUCTURE OF THE FIRST FF DOMAIN OF HUMAN TITLE 2 TRANSCRIPTION FACTOR CA150
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FF DOMAIN; COMPND 5 SYNONYM: TRANSCRIPTION FACTOR CA150, TATA BOX-BINDING COMPND 6 PROTEIN- ASSOCIATED FACTOR 2S; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TCERG1, CA150, TAF2S; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P051128-07; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS FF DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 2DOD 1 VERSN REVDAT 1 28-OCT-06 2DOD 0
JRNL AUTH S.SUZUKI,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FIRST FF DOMAIN OF HUMAN JRNL TITL 2 TRANSCRIPTION FACTOR CA150 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DOD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB025651.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2MM 13C/15N-PROTEIN; 20MM D REMARK 210 -TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9321, OLIVIA 1.10.5, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 651 112.79 -36.91 REMARK 500 1 VAL A 675 97.87 -68.06 REMARK 500 1 PHE A 678 47.67 -82.94 REMARK 500 2 GLU A 653 85.20 -69.25 REMARK 500 2 ALA A 661 -70.46 -67.68 REMARK 500 2 VAL A 675 103.44 -55.11 REMARK 500 2 ASN A 698 161.47 -47.09 REMARK 500 2 SER A 720 41.73 -100.92 REMARK 500 2 PRO A 722 93.23 -69.77 REMARK 500 3 ALA A 651 79.67 -104.73 REMARK 500 3 ALA A 661 -71.07 -70.62 REMARK 500 3 ASP A 691 142.05 -34.28 REMARK 500 4 SER A 646 104.97 -38.34 REMARK 500 4 ALA A 651 101.72 -43.00 REMARK 500 4 ARG A 654 -53.23 -129.87 REMARK 500 4 ALA A 655 50.78 -118.06 REMARK 500 4 ARG A 719 99.87 -49.82 REMARK 500 4 SER A 720 119.81 -174.62 REMARK 500 4 SER A 724 42.86 37.04 REMARK 500 5 ALA A 651 130.12 -39.11 REMARK 500 5 ALA A 661 -70.94 -64.00 REMARK 500 5 ARG A 673 -28.54 -39.49 REMARK 500 5 PHE A 678 34.72 -83.81 REMARK 500 5 SER A 720 158.75 -48.03 REMARK 500 6 SER A 649 -60.89 -90.51 REMARK 500 6 GLU A 653 41.01 -90.39 REMARK 500 6 LEU A 670 -34.85 -38.01 REMARK 500 6 GLU A 717 91.34 -54.83 REMARK 500 6 ARG A 719 152.46 -43.12 REMARK 500 7 ALA A 655 53.29 -95.75 REMARK 500 7 ALA A 661 -70.71 -62.31 REMARK 500 7 GLU A 716 -26.34 -39.67 REMARK 500 7 ARG A 718 143.48 -34.35 REMARK 500 7 SER A 720 101.11 -46.04 REMARK 500 7 SER A 723 130.34 -38.67 REMARK 500 8 SER A 645 42.06 -101.29 REMARK 500 8 SER A 679 -175.52 -69.04 REMARK 500 9 ALA A 655 41.60 -98.50 REMARK 500 9 ALA A 661 -70.99 -71.84 REMARK 500 9 GLU A 717 83.31 -65.83 REMARK 500 10 ARG A 673 -34.53 -35.02 REMARK 500 10 GLU A 716 30.35 -87.55 REMARK 500 11 SER A 646 -49.39 -132.40 REMARK 500 11 ALA A 655 96.07 -66.64 REMARK 500 11 ALA A 661 -71.07 -67.41 REMARK 500 11 ARG A 673 -19.57 -49.42 REMARK 500 11 ASN A 698 161.88 -48.70 REMARK 500 11 GLU A 717 124.79 -34.50 REMARK 500 11 ARG A 719 -66.18 -103.41 REMARK 500 12 VAL A 675 108.74 -53.84 REMARK 500 12 ASN A 698 161.65 -49.95 REMARK 500 12 GLU A 717 133.62 -36.21 REMARK 500 12 PRO A 722 2.67 -69.80 REMARK 500 12 SER A 723 124.18 -34.66 REMARK 500 13 SER A 648 126.45 -171.84 REMARK 500 13 ALA A 655 34.80 -84.18 REMARK 500 13 ALA A 661 -70.29 -66.59 REMARK 500 13 LEU A 670 -38.94 -36.83 REMARK 500 13 ARG A 673 -35.68 -39.16 REMARK 500 13 VAL A 675 91.78 -59.43 REMARK 500 13 SER A 676 151.16 -49.11 REMARK 500 13 SER A 679 -178.19 -60.28 REMARK 500 13 ASP A 691 139.84 -37.14 REMARK 500 13 ARG A 719 151.03 -34.83 REMARK 500 14 ALA A 651 33.55 -89.44 REMARK 500 14 ALA A 655 51.52 -119.99 REMARK 500 14 ARG A 673 -19.51 -48.07 REMARK 500 14 PHE A 678 43.91 -82.69 REMARK 500 15 ALA A 651 106.41 -50.93 REMARK 500 15 ALA A 655 55.59 -117.70 REMARK 500 15 ARG A 673 -26.82 -39.22 REMARK 500 15 VAL A 675 99.07 -60.29 REMARK 500 15 SER A 676 151.11 -49.47 REMARK 500 15 PHE A 678 48.12 -102.01 REMARK 500 15 ASP A 691 140.09 -34.00 REMARK 500 15 ASN A 698 162.62 -48.50 REMARK 500 15 GLU A 716 30.49 -87.89 REMARK 500 15 GLU A 717 88.38 -53.47 REMARK 500 16 SER A 648 50.05 38.65 REMARK 500 16 GLU A 653 41.69 -85.21 REMARK 500 16 ALA A 655 37.19 -85.97 REMARK 500 16 ARG A 673 -39.26 -36.26 REMARK 500 16 VAL A 675 87.54 -59.57 REMARK 500 16 SER A 676 155.09 -37.15 REMARK 500 16 GLU A 717 80.99 -60.81 REMARK 500 17 ALA A 655 36.18 -96.67 REMARK 500 17 ASN A 698 162.81 -48.87 REMARK 500 17 GLU A 717 128.96 -34.32 REMARK 500 18 SER A 679 -178.69 -62.08 REMARK 500 18 ASN A 698 162.36 -47.50 REMARK 500 18 ARG A 718 122.69 -34.29 REMARK 500 19 ALA A 655 156.15 -42.79 REMARK 500 19 ALA A 661 -71.04 -68.39 REMARK 500 19 PHE A 678 44.92 -81.47 REMARK 500 19 SER A 724 161.29 -41.76 REMARK 500 20 SER A 646 113.78 -169.28 REMARK 500 20 ALA A 655 46.08 -106.38 REMARK 500 20 ARG A 673 -33.91 -39.63 REMARK 500 20 VAL A 675 97.09 -51.82 REMARK 500 20 PHE A 678 48.02 -76.85 REMARK 500 20 GLU A 717 100.93 -49.35 REMARK 500 20 PRO A 722 -179.54 -69.78 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK003002637.1 RELATED DB: TARGETDB
DBREF 2DOD A 651 719 UNP O14776 TCRG1_HUMAN 651 719
SEQADV 2DOD GLY A 644 UNP O14776 CLONING ARTIFACT SEQADV 2DOD SER A 645 UNP O14776 CLONING ARTIFACT SEQADV 2DOD SER A 646 UNP O14776 CLONING ARTIFACT SEQADV 2DOD GLY A 647 UNP O14776 CLONING ARTIFACT SEQADV 2DOD SER A 648 UNP O14776 CLONING ARTIFACT SEQADV 2DOD SER A 649 UNP O14776 CLONING ARTIFACT SEQADV 2DOD GLY A 650 UNP O14776 CLONING ARTIFACT SEQADV 2DOD SER A 720 UNP O14776 CLONING ARTIFACT SEQADV 2DOD GLY A 721 UNP O14776 CLONING ARTIFACT SEQADV 2DOD PRO A 722 UNP O14776 CLONING ARTIFACT SEQADV 2DOD SER A 723 UNP O14776 CLONING ARTIFACT SEQADV 2DOD SER A 724 UNP O14776 CLONING ARTIFACT SEQADV 2DOD GLY A 725 UNP O14776 CLONING ARTIFACT
SEQRES 1 A 82 GLY SER SER GLY SER SER GLY ALA ARG GLU ARG ALA ILE SEQRES 2 A 82 VAL PRO LEU GLU ALA ARG MET LYS GLN PHE LYS ASP MET SEQRES 3 A 82 LEU LEU GLU ARG GLY VAL SER ALA PHE SER THR TRP GLU SEQRES 4 A 82 LYS GLU LEU HIS LYS ILE VAL PHE ASP PRO ARG TYR LEU SEQRES 5 A 82 LEU LEU ASN PRO LYS GLU ARG LYS GLN VAL PHE ASP GLN SEQRES 6 A 82 TYR VAL LYS THR ARG ALA GLU GLU GLU ARG ARG SER GLY SEQRES 7 A 82 PRO SER SER GLY
HELIX 1 1 LEU A 659 ARG A 673 1 15 HELIX 2 2 TRP A 681 VAL A 689 1 9 HELIX 3 3 PRO A 692 LEU A 696 5 5 HELIX 4 4 PRO A 699 GLU A 715 1 17
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000