10 20 30 40 50 60 70 80 2DNU - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, STRUCTURAL PROTEIN 26-APR-06 2DNU
TITLE SOLUTION STRUCTURE OF RSGI RUH-061, A SH3 DOMAIN FROM HUMAN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SH3 MULTIPLE DOMAINS 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 SYNONYM: RUH-061; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS SH3, RSGI, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, STRUCTURAL KEYWDS 4 PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.OHASHI,H.HIROTA,T.NAGASHIMA,C.KUROSAKI,F.HAYASHI, AUTHOR 2 M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2DNU 1 VERSN REVDAT 1 26-OCT-06 2DNU 0
JRNL AUTH W.OHASHI,H.HIROTA,T.NAGASHIMA,C.KUROSAKI,F.HAYASHI, JRNL AUTH 2 M.YOSHIDA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RSGI RUH-061, A SH3 DOMAIN JRNL TITL 2 FROM HUMAN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DNU COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB025632.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.12MM RUH-061 U-15N,13C; REMARK 210 20MM TRIS U-2H; 100MM NACL; REMARK 210 1MM DTT U-2H; 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ, 700 MHZ REMARK 210 SPECTROMETER MODEL : INOVA, ECA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN, JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, DELTA NMR 4.3.2, REMARK 210 NMRPIPE 20031121, NMRVIEW REMARK 210 5.0.4, KUJIRA 0.9741, CYANA REMARK 210 2.0.17 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : THE SUBMITTED CONFORMER REMARK 210 MODELS ARE THOSE WITH THE REMARK 210 LOWEST NUMBER OF TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: SPECTROMETER_ID 1 IS FOR EXPERIMENT_ID 1, SPECTROMETER_ REMARK 210 ID 2 IS FOR EXPERIMENT_ID 2
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 23 -37.09 -38.14 REMARK 500 1 SER A 69 129.78 -38.22 REMARK 500 2 SER A 2 170.11 -57.86 REMARK 500 2 ASP A 23 -35.04 -35.82 REMARK 500 3 SER A 5 97.58 -48.03 REMARK 500 3 ASP A 65 153.21 -38.15 REMARK 500 4 LEU A 40 26.24 42.49 REMARK 500 4 SER A 69 116.80 -34.82 REMARK 500 5 GLU A 8 -60.89 -109.78 REMARK 500 5 LYS A 64 43.73 -82.87 REMARK 500 5 ASP A 65 156.44 -43.43 REMARK 500 7 SER A 6 40.52 -105.03 REMARK 500 8 PRO A 68 1.63 -69.83 REMARK 500 8 SER A 69 72.58 -67.75 REMARK 500 9 SER A 5 46.26 -87.20 REMARK 500 9 GLU A 8 -61.80 -100.87 REMARK 500 10 LEU A 40 30.05 37.00 REMARK 500 10 GLU A 41 33.57 35.06 REMARK 500 10 TYR A 45 105.90 -55.47 REMARK 500 10 ALA A 63 176.72 -57.77 REMARK 500 10 ASP A 65 106.02 -53.42 REMARK 500 11 SER A 3 154.98 -45.82 REMARK 500 11 LYS A 22 33.97 -86.36 REMARK 500 12 SER A 6 106.35 -57.85 REMARK 500 12 GLU A 41 52.20 34.37 REMARK 500 12 ASP A 65 101.79 -51.95 REMARK 500 12 SER A 69 175.49 -49.90 REMARK 500 13 SER A 66 108.08 -46.64 REMARK 500 14 SER A 6 135.60 -170.41 REMARK 500 14 ILE A 36 -70.18 -101.64 REMARK 500 14 PRO A 68 0.27 -69.86 REMARK 500 15 GLU A 8 -36.29 -34.77 REMARK 500 15 ALA A 63 177.24 -58.37 REMARK 500 16 SER A 3 106.82 -48.92 REMARK 500 16 SER A 5 41.83 -103.61 REMARK 500 16 GLU A 8 -55.98 -130.48 REMARK 500 17 SER A 2 156.15 -38.74 REMARK 500 17 GLU A 41 52.71 37.02 REMARK 500 17 SER A 66 88.11 -64.82 REMARK 500 18 GLU A 8 -60.04 -92.12 REMARK 500 18 GLU A 41 49.78 -93.80 REMARK 500 18 LYS A 64 74.75 -111.54 REMARK 500 19 GLU A 41 46.74 -81.71 REMARK 500 20 SER A 6 104.19 -45.62 REMARK 500 20 GLU A 41 30.43 -85.07 REMARK 500 20 ALA A 63 175.19 -59.14 REMARK 500 20 PRO A 68 85.46 -69.80 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002100407.1 RELATED DB: TARGETDB
DBREF 2DNU A 8 65 UNP Q5TDQ8 Q5TDQ8_HUMAN 75 132
SEQADV 2DNU GLY A 1 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU SER A 2 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU SER A 3 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU GLY A 4 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU SER A 5 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU SER A 6 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU GLY A 7 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU SER A 66 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU GLY A 67 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU PRO A 68 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU SER A 69 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU SER A 70 UNP Q5TDQ8 CLONING ARTIFACT SEQADV 2DNU GLY A 71 UNP Q5TDQ8 CLONING ARTIFACT
SEQRES 1 A 71 GLY SER SER GLY SER SER GLY GLU GLU LYS TYR VAL THR SEQRES 2 A 71 VAL GLN PRO TYR THR SER GLN SER LYS ASP GLU ILE GLY SEQRES 3 A 71 PHE GLU LYS GLY VAL THR VAL GLU VAL ILE ARG LYS ASN SEQRES 4 A 71 LEU GLU GLY TRP TRP TYR ILE ARG TYR LEU GLY LYS GLU SEQRES 5 A 71 GLY TRP ALA PRO ALA SER TYR LEU LYS LYS ALA LYS ASP SEQRES 6 A 71 SER GLY PRO SER SER GLY
HELIX 1 1 SER A 58 LEU A 60 5 3
SHEET 1 A 5 LYS A 51 PRO A 56 0 SHEET 2 A 5 TRP A 43 TYR A 48 -1 N TRP A 44 O ALA A 55 SHEET 3 A 5 THR A 32 VAL A 35 -1 N GLU A 34 O ARG A 47 SHEET 4 A 5 GLU A 9 VAL A 12 -1 N TYR A 11 O VAL A 33 SHEET 5 A 5 LYS A 61 LYS A 62 -1 O LYS A 61 N VAL A 12
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000