10 20 30 40 50 60 70 80 2DNP - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER TRANSCRIPTION 26-APR-06 2DNP
TITLE SOLUTION STRUCTURE OF RNA BINDING DOMAIN 2 IN RNA-BINDING TITLE 2 PROTEIN 14
COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-BINDING PROTEIN 14; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 SYNONYM: RNA-BINDING MOTIF PROTEIN 14, RRM-CONTAINING COMPND 6 COACTIVATOR ACTIVATOR/MODULATOR, SYNAPTOTAGMIN-INTERACTING COMPND 7 PROTEIN, SYT-INTERACTING PROTEIN; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RBM14; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P051121-02; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS RRM DOMAIN, RBD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.KUSUHARA,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, AUTHOR 2 M.SHIROUZU,S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS AUTHOR 3 INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2DNP 1 VERSN REVDAT 1 26-OCT-06 2DNP 0
JRNL AUTH M.KUSUHARA,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA, JRNL AUTH 2 T.TERADA,M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RNA BINDING DOMAIN 2 IN JRNL TITL 2 RNA-BINDING PROTEIN 14 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT,P REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DNP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-MAY-06. REMARK 100 THE RCSB ID CODE IS RCSB025627.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.66MM 13C-15N PROTEIN, 20MM REMARK 210 D-TRIS-HCL(PH7.0), 100MM NACL, REMARK 210 1MM D-DTT, 0.02% NAN3; 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9736, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 78 156.62 -48.07 REMARK 500 1 GLN A 93 -39.27 -39.53 REMARK 500 1 LYS A 112 -75.90 -31.69 REMARK 500 1 GLU A 120 -63.60 -91.94 REMARK 500 1 ASN A 133 97.14 -45.85 REMARK 500 1 LYS A 135 123.71 -34.25 REMARK 500 1 PRO A 156 -180.00 -69.74 REMARK 500 2 THR A 78 161.37 -41.27 REMARK 500 2 SER A 87 130.30 -39.63 REMARK 500 2 ALA A 89 32.58 -97.60 REMARK 500 2 LYS A 112 -76.06 -32.29 REMARK 500 2 ASN A 133 94.63 -45.74 REMARK 500 2 LYS A 135 123.25 -37.39 REMARK 500 3 SER A 75 -52.14 -127.65 REMARK 500 3 ALA A 89 34.29 -91.42 REMARK 500 3 GLN A 93 -39.49 -39.15 REMARK 500 3 LYS A 112 -75.97 -32.07 REMARK 500 3 ASN A 133 91.12 -46.18 REMARK 500 3 LYS A 135 129.47 -35.51 REMARK 500 3 SER A 158 163.80 -48.18 REMARK 500 4 ALA A 89 32.22 -92.52 REMARK 500 4 CYS A 108 109.01 -175.10 REMARK 500 4 LYS A 112 -75.85 -31.21 REMARK 500 4 GLU A 120 -72.15 -85.80 REMARK 500 4 ASN A 133 99.21 -46.35 REMARK 500 4 LYS A 135 125.03 -35.77 REMARK 500 4 THR A 148 98.90 -48.04 REMARK 500 4 SER A 157 117.12 -36.89 REMARK 500 5 SER A 72 43.33 -106.12 REMARK 500 5 ALA A 89 31.84 -92.37 REMARK 500 5 LYS A 112 -76.07 -32.42 REMARK 500 5 ASN A 133 94.85 -44.97 REMARK 500 5 LYS A 135 120.39 -34.57 REMARK 500 5 SER A 157 99.60 -62.08 REMARK 500 6 SER A 72 -47.51 -132.75 REMARK 500 6 SER A 87 126.02 -37.24 REMARK 500 6 ALA A 89 32.93 -93.63 REMARK 500 6 LYS A 112 -75.53 -30.23 REMARK 500 6 ASN A 133 94.58 -46.90 REMARK 500 6 LYS A 135 125.72 -37.67 REMARK 500 6 SER A 154 124.37 -174.48 REMARK 500 6 PRO A 156 96.07 -69.80 REMARK 500 7 ALA A 89 32.99 -89.65 REMARK 500 7 LYS A 112 -75.81 -31.80 REMARK 500 7 ASN A 133 92.93 -46.23 REMARK 500 7 LYS A 135 122.82 -34.34 REMARK 500 8 SER A 87 137.37 -39.64 REMARK 500 8 ALA A 89 34.63 -92.85 REMARK 500 8 LYS A 112 -75.48 -30.81 REMARK 500 8 ASN A 133 93.10 -45.59 REMARK 500 8 LYS A 135 124.68 -35.40 REMARK 500 8 LYS A 152 146.01 -35.85 REMARK 500 9 SER A 75 91.23 -62.06 REMARK 500 9 SER A 87 134.52 -38.95 REMARK 500 9 ALA A 89 36.41 -93.47 REMARK 500 9 LYS A 112 -75.64 -31.08 REMARK 500 9 ASN A 133 98.18 -46.49 REMARK 500 9 LYS A 135 125.67 -38.25 REMARK 500 9 LYS A 152 42.57 -87.68 REMARK 500 9 SER A 157 102.18 -49.98 REMARK 500 10 SER A 71 42.37 35.76 REMARK 500 10 SER A 74 42.42 -99.89 REMARK 500 10 SER A 87 170.30 -53.60 REMARK 500 10 GLU A 94 -70.88 -55.92 REMARK 500 10 LYS A 112 -75.85 -31.75 REMARK 500 10 GLU A 120 -63.09 -91.45 REMARK 500 10 ASN A 133 97.27 -47.05 REMARK 500 10 LYS A 135 121.98 -36.68 REMARK 500 10 SER A 154 75.10 -105.21 REMARK 500 10 SER A 158 42.31 -92.09 REMARK 500 11 ALA A 89 31.71 -90.35 REMARK 500 11 CYS A 108 109.67 -175.44 REMARK 500 11 LYS A 112 -75.79 -31.48 REMARK 500 11 ASN A 133 99.49 -46.70 REMARK 500 11 LYS A 135 126.32 -37.53 REMARK 500 11 LYS A 152 128.95 -171.32 REMARK 500 12 SER A 72 -53.39 -123.18 REMARK 500 12 TRP A 79 173.89 -59.32 REMARK 500 12 ALA A 89 32.34 -94.24 REMARK 500 12 GLN A 93 -38.03 -36.95 REMARK 500 12 LYS A 112 -76.21 -32.15 REMARK 500 12 ASN A 133 95.54 -45.52 REMARK 500 12 LYS A 135 123.89 -34.84 REMARK 500 12 LYS A 149 139.40 -38.15 REMARK 500 12 LYS A 153 72.50 -108.64 REMARK 500 13 SER A 74 92.35 -54.89 REMARK 500 13 SER A 75 99.57 -65.76 REMARK 500 13 ASN A 77 79.53 -111.69 REMARK 500 13 ALA A 89 34.94 -91.12 REMARK 500 13 GLN A 93 -38.96 -38.31 REMARK 500 13 LYS A 112 -75.67 -31.38 REMARK 500 13 GLU A 120 -61.13 -91.32 REMARK 500 13 ASN A 133 95.87 -44.34 REMARK 500 13 LYS A 135 119.78 -34.01 REMARK 500 13 PRO A 156 89.34 -69.75 REMARK 500 14 ASN A 77 104.29 -57.16 REMARK 500 14 ALA A 89 35.36 -91.84 REMARK 500 14 LYS A 112 -76.10 -31.82 REMARK 500 14 ASN A 133 95.12 -45.26 REMARK 500 14 LYS A 135 121.10 -34.15 REMARK 500 14 SER A 154 -51.34 -127.81 REMARK 500 14 PRO A 156 2.22 -69.76 REMARK 500 15 ALA A 89 33.65 -90.11 REMARK 500 15 CYS A 108 107.77 -161.26 REMARK 500 15 LYS A 112 -75.92 -32.02 REMARK 500 15 ASN A 133 101.00 -46.70 REMARK 500 15 LYS A 149 -62.36 -124.40 REMARK 500 16 ALA A 89 30.68 -91.74 REMARK 500 16 GLU A 94 -72.87 -50.90 REMARK 500 16 CYS A 108 113.64 -175.64 REMARK 500 16 LYS A 112 -75.86 -31.88 REMARK 500 16 GLU A 120 -66.10 -94.77 REMARK 500 16 ASN A 133 95.37 -45.23 REMARK 500 16 LYS A 135 123.21 -34.77 REMARK 500 16 LYS A 153 109.04 -35.64 REMARK 500 17 SER A 74 -63.82 -91.13 REMARK 500 17 SER A 87 129.90 -36.50 REMARK 500 17 ALA A 89 36.51 -92.79 REMARK 500 17 LYS A 112 -75.86 -31.31 REMARK 500 17 ASN A 133 95.97 -47.12 REMARK 500 17 LYS A 135 125.78 -38.64 REMARK 500 17 SER A 147 41.86 -82.79 REMARK 500 17 GLN A 151 42.81 -85.62 REMARK 500 18 GLU A 94 -71.18 -52.22 REMARK 500 18 CYS A 108 128.66 -170.12 REMARK 500 18 LYS A 112 -75.88 -31.69 REMARK 500 18 ASN A 133 100.76 -47.06 REMARK 500 18 LYS A 135 123.79 -39.67 REMARK 500 18 SER A 154 151.84 -47.92 REMARK 500 19 SER A 87 135.36 -39.86 REMARK 500 19 ALA A 89 34.17 -89.90 REMARK 500 19 LYS A 112 -75.65 -31.47 REMARK 500 19 GLU A 120 -63.01 -95.14 REMARK 500 19 ASN A 133 100.20 -45.24 REMARK 500 19 LYS A 135 123.28 -36.45 REMARK 500 19 THR A 148 91.73 -67.96 REMARK 500 19 GLN A 151 -72.12 -45.48 REMARK 500 19 PRO A 156 -178.30 -69.72 REMARK 500 20 SER A 87 132.84 -39.12 REMARK 500 20 ALA A 89 34.53 -90.60 REMARK 500 20 LYS A 112 -75.96 -31.74 REMARK 500 20 GLU A 120 -60.47 -94.61 REMARK 500 20 ASN A 133 95.17 -46.06 REMARK 500 20 LYS A 135 122.93 -34.03 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001001538.1 RELATED DB: TARGETDB
DBREF 2DNP A 77 153 UNP Q96PK6 RBM14_HUMAN 77 153
SEQADV 2DNP GLY A 70 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 71 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 72 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP GLY A 73 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 74 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 75 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP GLY A 76 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 154 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP GLY A 155 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP PRO A 156 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 157 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP SER A 158 UNP Q96PK6 CLONING ARTIFACT SEQADV 2DNP GLY A 159 UNP Q96PK6 CLONING ARTIFACT
SEQRES 1 A 90 GLY SER SER GLY SER SER GLY ASN THR TRP LYS ILE PHE SEQRES 2 A 90 VAL GLY ASN VAL SER ALA ALA CYS THR SER GLN GLU LEU SEQRES 3 A 90 ARG SER LEU PHE GLU ARG ARG GLY ARG VAL ILE GLU CYS SEQRES 4 A 90 ASP VAL VAL LYS ASP TYR ALA PHE VAL HIS MET GLU LYS SEQRES 5 A 90 GLU ALA ASP ALA LYS ALA ALA ILE ALA GLN LEU ASN GLY SEQRES 6 A 90 LYS GLU VAL LYS GLY LYS ARG ILE ASN VAL GLU LEU SER SEQRES 7 A 90 THR LYS GLY GLN LYS LYS SER GLY PRO SER SER GLY
HELIX 1 1 THR A 91 GLY A 103 1 13 HELIX 2 2 LYS A 121 ASN A 133 1 13
SHEET 1 A 4 VAL A 105 VAL A 110 0 SHEET 2 A 4 ALA A 115 MET A 119 -1 O HIS A 118 N GLU A 107 SHEET 3 A 4 ILE A 81 GLY A 84 -1 N ILE A 81 O VAL A 117 SHEET 4 A 4 ASN A 143 LEU A 146 -1 O ASN A 143 N GLY A 84 SHEET 1 B 2 GLU A 136 VAL A 137 0 SHEET 2 B 2 LYS A 140 ARG A 141 -1 O LYS A 140 N VAL A 137
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000