10 20 30 40 50 60 70 80 2DL6 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER GENE REGULATION 17-APR-06 2DL6
TITLE SOLUTION STRUCTURE OF THE FIRST BRK DOMAIN FROM HUMAN TITLE 2 CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 8
COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BRK DOMAIN; COMPND 5 SYNONYM: ATP-DEPENDENT HELICASE CHD8, CHD-8, HELICASE WITH COMPND 6 SNF2 DOMAIN 1; COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CHD8, KIAA1564; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P051017-15; SOURCE 9 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS BRK, CHD8, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, GENE KEYWDS 4 REGULATION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.SUETAKE,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2DL6 1 VERSN REVDAT 1 17-OCT-06 2DL6 0
JRNL AUTH T.SUETAKE,T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FIRST BRK DOMAIN FROM JRNL TITL 2 HUMAN CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 8 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DL6 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB025545.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.01MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL; REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY, 3D_ REMARK 210 15N-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9321, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATION, TARGET REMARK 210 FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 9 92.80 -69.76 REMARK 500 1 PRO A 50 2.62 -69.74 REMARK 500 2 VAL A 14 172.92 -56.00 REMARK 500 2 PRO A 50 2.03 -69.75 REMARK 500 2 ASN A 77 -32.98 -35.91 REMARK 500 2 PRO A 80 2.71 -69.76 REMARK 500 3 VAL A 14 177.82 -54.08 REMARK 500 3 LEU A 42 -32.15 -34.86 REMARK 500 3 PRO A 50 2.95 -69.82 REMARK 500 3 ALA A 60 -34.43 -33.97 REMARK 500 4 PRO A 37 -173.87 -69.77 REMARK 500 4 PRO A 50 3.16 -69.72 REMARK 500 4 LYS A 75 105.38 -55.87 REMARK 500 5 VAL A 14 170.70 -53.78 REMARK 500 5 PRO A 37 -175.66 -69.84 REMARK 500 5 PRO A 50 0.10 -69.77 REMARK 500 5 PRO A 80 88.98 -69.76 REMARK 500 6 ASP A 35 -39.83 -34.58 REMARK 500 6 PRO A 37 -173.63 -69.71 REMARK 500 6 PRO A 50 2.90 -69.74 REMARK 500 7 PRO A 50 0.38 -69.81 REMARK 500 7 PRO A 80 99.01 -69.80 REMARK 500 8 PRO A 37 -168.38 -69.74 REMARK 500 8 PRO A 50 1.12 -69.75 REMARK 500 9 PRO A 37 -174.00 -69.80 REMARK 500 9 PRO A 50 2.23 -69.77 REMARK 500 9 LYS A 67 -38.48 -39.47 REMARK 500 10 PRO A 50 2.58 -69.73 REMARK 500 10 PRO A 80 -174.15 -69.77 REMARK 500 11 ASP A 13 106.94 -53.69 REMARK 500 11 PRO A 50 2.71 -69.78 REMARK 500 11 PRO A 80 88.62 -69.79 REMARK 500 12 PRO A 9 5.28 -69.71 REMARK 500 12 LEU A 42 -34.93 -33.41 REMARK 500 12 TRP A 70 174.83 -52.28 REMARK 500 12 PRO A 80 -173.34 -69.72 REMARK 500 13 PRO A 9 2.12 -69.78 REMARK 500 13 LEU A 16 -26.52 -39.48 REMARK 500 13 PRO A 37 -176.39 -69.78 REMARK 500 13 ARG A 39 -37.69 -37.36 REMARK 500 13 PRO A 50 2.53 -69.78 REMARK 500 14 PRO A 9 2.91 -69.80 REMARK 500 14 PRO A 37 -172.70 -69.75 REMARK 500 14 LEU A 42 -34.56 -33.36 REMARK 500 14 PRO A 50 2.13 -69.76 REMARK 500 14 GLN A 68 176.27 -55.95 REMARK 500 15 PRO A 50 1.66 -69.75 REMARK 500 15 PRO A 80 -173.32 -69.78 REMARK 500 16 LEU A 42 -32.89 -35.07 REMARK 500 16 PRO A 50 2.21 -69.73 REMARK 500 16 ASP A 64 -33.04 -36.11 REMARK 500 16 PRO A 80 99.12 -69.72 REMARK 500 17 PRO A 9 94.36 -69.77 REMARK 500 17 PRO A 37 -174.32 -69.80 REMARK 500 17 PRO A 50 2.81 -69.75 REMARK 500 17 PRO A 80 -178.57 -69.78 REMARK 500 17 SER A 82 170.61 -54.65 REMARK 500 18 PRO A 9 5.71 -69.75 REMARK 500 18 PRO A 37 -175.72 -69.79 REMARK 500 19 VAL A 14 170.59 -53.06 REMARK 500 19 LEU A 42 -37.73 -38.74 REMARK 500 19 GLN A 71 170.49 -53.28 REMARK 500 19 PRO A 80 2.95 -69.73 REMARK 500 20 ASP A 35 -35.56 -38.08 REMARK 500 20 PRO A 37 -173.89 -69.79 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002101536.1 RELATED DB: TARGETDB
DBREF 2DL6 A 8 77 UNP Q9HCK8 CHD8_HUMAN 2024 2093
SEQADV 2DL6 GLY A 1 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 SER A 2 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 SER A 3 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 GLY A 4 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 SER A 5 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 SER A 6 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 GLY A 7 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 SER A 78 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 GLY A 79 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 PRO A 80 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 SER A 81 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 SER A 82 UNP Q9HCK8 CLONING ARTIFACT SEQADV 2DL6 GLY A 83 UNP Q9HCK8 CLONING ARTIFACT
SEQRES 1 A 83 GLY SER SER GLY SER SER GLY GLU PRO ASN HIS LEU ASP SEQRES 2 A 83 VAL ASP LEU GLU THR ARG ILE PRO VAL ILE ASN LYS VAL SEQRES 3 A 83 ASP GLY THR LEU LEU VAL GLY GLU ASP ALA PRO ARG ARG SEQRES 4 A 83 ALA GLU LEU GLU MET TRP LEU GLN GLY HIS PRO GLU PHE SEQRES 5 A 83 ALA VAL ASP PRO ARG PHE LEU ALA TYR MET GLU ASP ARG SEQRES 6 A 83 ARG LYS GLN LYS TRP GLN ARG CYS LYS LYS ASN ASN SER SEQRES 7 A 83 GLY PRO SER SER GLY
HELIX 1 1 VAL A 32 ALA A 36 5 5 HELIX 2 2 GLU A 41 HIS A 49 1 9 HELIX 3 3 ASP A 55 GLN A 68 1 14
SHEET 1 A 2 VAL A 22 ILE A 23 0 SHEET 2 A 2 LEU A 30 LEU A 31 -1 O LEU A 31 N VAL A 22
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000