10 20 30 40 50 60 70 80 2DL4 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER SIGNALING PROTEIN 17-APR-06 2DL4
TITLE SOLUTION STRUCTURE OF THE FIRST SH3 DOMAIN OF STAC PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN STAC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 SYNONYM: SRC HOMOLOGY 3 AND CYSTEINE-RICH DOMAIN PROTEIN; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: STAC; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050613-10; SOURCE 9 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS SH3 DOMAIN, STAC PROTEIN, SRC HOMOLOGY 3, CYSTEINE-RICH KEYWDS 2 DOMAIN PROTEIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 3 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 4 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 5 SIGNALING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR X.R.QIN,T.SUETAKE,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2DL4 1 VERSN REVDAT 1 17-OCT-06 2DL4 0
JRNL AUTH X.R.QIN,T.SUETAKE,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE FIRST SH3 DOMAIN OF STAC JRNL TITL 2 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DL4 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB025543.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.09MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS- REMARK 210 HCL(PH7.0); 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3; 90% H2O, 10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9296, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 28 95.89 -69.72 REMARK 500 1 GLN A 48 -75.04 -33.59 REMARK 500 1 ARG A 61 130.24 -37.79 REMARK 500 1 PRO A 65 99.76 -69.74 REMARK 500 2 PRO A 28 90.00 -69.85 REMARK 500 2 GLN A 48 -70.54 -33.65 REMARK 500 3 SER A 5 34.72 35.30 REMARK 500 3 PRO A 28 90.85 -69.74 REMARK 500 3 GLN A 48 -71.96 -34.35 REMARK 500 4 PRO A 28 99.32 -69.81 REMARK 500 4 GLN A 48 -72.61 -32.36 REMARK 500 4 ARG A 61 136.52 -35.65 REMARK 500 4 PRO A 65 86.85 -69.74 REMARK 500 5 PRO A 28 92.24 -69.75 REMARK 500 5 GLN A 48 -71.60 -34.18 REMARK 500 5 PRO A 65 93.25 -69.74 REMARK 500 6 SER A 2 99.76 -61.60 REMARK 500 6 SER A 3 42.61 39.00 REMARK 500 6 PRO A 28 96.07 -69.77 REMARK 500 6 ASP A 41 -70.19 -72.93 REMARK 500 6 GLN A 48 -73.68 -34.07 REMARK 500 7 PRO A 28 89.62 -69.80 REMARK 500 7 LEU A 34 109.97 -58.11 REMARK 500 7 ARG A 61 135.37 -37.26 REMARK 500 7 SER A 66 -51.42 -128.47 REMARK 500 7 SER A 67 158.99 -43.15 REMARK 500 8 PRO A 28 88.57 -69.82 REMARK 500 8 ASN A 39 79.73 -110.87 REMARK 500 8 GLN A 48 -75.07 -31.15 REMARK 500 9 SER A 5 103.29 -52.21 REMARK 500 9 ASN A 21 31.54 -84.52 REMARK 500 9 PRO A 28 92.69 -69.76 REMARK 500 9 GLN A 48 -74.98 -34.27 REMARK 500 9 PRO A 65 1.58 -69.85 REMARK 500 10 SER A 2 109.48 -42.10 REMARK 500 10 PRO A 28 84.48 -69.70 REMARK 500 10 GLN A 48 -75.14 -31.04 REMARK 500 11 PRO A 28 86.85 -69.75 REMARK 500 11 GLN A 48 -71.39 -30.51 REMARK 500 12 LEU A 34 109.80 -59.38 REMARK 500 12 GLN A 48 -74.79 -33.18 REMARK 500 13 PRO A 28 95.51 -69.78 REMARK 500 13 LEU A 34 103.12 -57.80 REMARK 500 13 GLN A 48 -73.65 -29.93 REMARK 500 14 SER A 6 42.20 -91.77 REMARK 500 14 PRO A 28 88.98 -69.76 REMARK 500 14 ASP A 41 -70.35 -58.02 REMARK 500 14 GLN A 48 -74.80 -29.04 REMARK 500 14 SER A 66 94.77 -68.98 REMARK 500 15 SER A 5 41.93 34.51 REMARK 500 15 GLN A 48 -74.01 -33.54 REMARK 500 15 PRO A 65 -178.49 -69.77 REMARK 500 16 PRO A 28 93.78 -69.73 REMARK 500 16 ASN A 39 -175.01 -55.35 REMARK 500 16 GLN A 48 -68.80 -28.34 REMARK 500 16 ARG A 61 138.12 -37.02 REMARK 500 16 PRO A 65 2.73 -69.80 REMARK 500 16 SER A 66 123.17 -36.54 REMARK 500 16 SER A 67 -30.64 -38.33 REMARK 500 17 ASN A 21 33.71 -87.20 REMARK 500 17 PRO A 28 88.12 -69.76 REMARK 500 18 SER A 3 -53.93 -126.42 REMARK 500 18 LEU A 35 -61.05 -98.44 REMARK 500 18 GLN A 48 -74.26 -32.04 REMARK 500 18 ARG A 61 133.18 -39.04 REMARK 500 19 SER A 3 97.80 -69.28 REMARK 500 19 PRO A 28 95.38 -69.82 REMARK 500 19 GLN A 48 -73.31 -33.61 REMARK 500 19 PRO A 65 96.76 -69.77 REMARK 500 20 SER A 5 156.96 -45.39 REMARK 500 20 ASN A 21 34.38 -83.79 REMARK 500 20 PRO A 28 93.12 -69.69 REMARK 500 20 GLU A 40 -57.11 -122.78 REMARK 500 20 ASP A 41 -71.37 -58.34 REMARK 500 20 GLN A 48 -72.31 -30.19 REMARK 500 20 LEU A 62 40.35 -102.01 REMARK 500 20 PRO A 65 93.73 -69.81 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002013291.1 RELATED DB: TARGETDB
DBREF 2DL4 A 8 62 UNP Q99469 STAC_HUMAN 288 342
SEQADV 2DL4 GLY A 1 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 SER A 2 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 SER A 3 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 GLY A 4 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 SER A 5 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 SER A 6 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 GLY A 7 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 SER A 63 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 GLY A 64 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 PRO A 65 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 SER A 66 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 SER A 67 UNP Q99469 CLONING ARTIFACT SEQADV 2DL4 GLY A 68 UNP Q99469 CLONING ARTIFACT
SEQRES 1 A 68 GLY SER SER GLY SER SER GLY ASN THR TYR VAL ALA LEU SEQRES 2 A 68 TYR LYS PHE VAL PRO GLN GLU ASN GLU ASP LEU GLU MET SEQRES 3 A 68 ARG PRO GLY ASP ILE ILE THR LEU LEU GLU ASP SER ASN SEQRES 4 A 68 GLU ASP TRP TRP LYS GLY LYS ILE GLN ASP ARG ILE GLY SEQRES 5 A 68 PHE PHE PRO ALA ASN PHE VAL GLN ARG LEU SER GLY PRO SEQRES 6 A 68 SER SER GLY
SHEET 1 A 5 ILE A 51 PRO A 55 0 SHEET 2 A 5 TRP A 42 LYS A 46 -1 N TRP A 43 O PHE A 54 SHEET 3 A 5 ILE A 31 GLU A 36 -1 N GLU A 36 O LYS A 44 SHEET 4 A 5 THR A 9 ALA A 12 -1 N TYR A 10 O ILE A 32 SHEET 5 A 5 VAL A 59 ARG A 61 -1 O GLN A 60 N VAL A 11
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000