10 20 30 40 50 60 70 80 2DIV - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 30-MAR-06 2DIV
TITLE SOLUTION STRUCTURE OF THE RRM DOMAIN OF TRNA SELENOCYSTEINE TITLE 2 ASSOCIATED PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRNA SELENOCYSTEINE ASSOCIATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RRM DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SECP43; RP4-669K10.4; RP4-669K10.4-001; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P051003-01; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS NMR, STRUCTURAL GENOMICS, RRM DOMAIN, TRNA SELENOCYSTEINE KEYWDS 2 ASSOCIATED PROTEIN, NPPSFA, NATIONAL PROJECT ON PROTEIN KEYWDS 3 STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 2DIV 1 VERSN REVDAT 1 30-SEP-06 2DIV 0
JRNL AUTH W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RRM DOMAIN OF TRNA JRNL TITL 2 SELENOCYSTEINE ASSOCIATED PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DIV COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB025464.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH 7.0); REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90%H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9321, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 MET A 8 49.67 -101.10 REMARK 500 1 PRO A 19 2.61 -69.75 REMARK 500 1 GLU A 23 -32.55 -37.78 REMARK 500 1 ALA A 52 -29.41 -39.41 REMARK 500 1 ASN A 73 83.01 -68.60 REMARK 500 1 ALA A 80 124.43 -33.80 REMARK 500 1 ALA A 83 138.79 -170.89 REMARK 500 1 PHE A 86 101.00 -58.84 REMARK 500 1 THR A 92 42.12 -104.47 REMARK 500 1 TYR A 93 42.16 -84.24 REMARK 500 2 SER A 6 41.34 -93.72 REMARK 500 2 MET A 8 86.47 -54.64 REMARK 500 2 PRO A 19 2.18 -69.75 REMARK 500 2 ASN A 73 81.29 -67.84 REMARK 500 2 ALA A 80 129.93 -37.03 REMARK 500 2 ALA A 83 113.03 -174.67 REMARK 500 2 PHE A 86 100.22 -56.75 REMARK 500 2 THR A 92 42.85 -97.14 REMARK 500 2 TYR A 93 41.24 -83.50 REMARK 500 2 SER A 97 96.28 -45.26 REMARK 500 3 MET A 8 46.28 -96.10 REMARK 500 3 PRO A 19 1.95 -69.76 REMARK 500 3 GLU A 23 -34.02 -34.48 REMARK 500 3 ALA A 52 -29.43 -37.36 REMARK 500 3 ASN A 73 82.64 -69.94 REMARK 500 3 ALA A 80 126.31 -34.58 REMARK 500 3 ALA A 83 134.93 -171.71 REMARK 500 3 THR A 92 60.76 -112.85 REMARK 500 4 SER A 2 -39.12 -133.41 REMARK 500 4 PRO A 19 2.49 -69.84 REMARK 500 4 ALA A 52 -29.98 -37.35 REMARK 500 4 ASN A 73 88.79 -65.48 REMARK 500 4 ALA A 80 123.41 -33.60 REMARK 500 4 THR A 92 34.91 -96.79 REMARK 500 4 SER A 94 130.69 -173.06 REMARK 500 4 SER A 97 139.02 -37.54 REMARK 500 5 SER A 3 103.79 -49.06 REMARK 500 5 MET A 8 45.50 39.55 REMARK 500 5 ALA A 10 30.02 -85.24 REMARK 500 5 GLU A 23 -39.90 -37.06 REMARK 500 5 ALA A 52 -28.94 -39.03 REMARK 500 5 ASN A 73 83.76 -63.12 REMARK 500 5 TYR A 93 106.19 -42.61 REMARK 500 6 SER A 6 94.31 -67.87 REMARK 500 6 MET A 8 68.41 -111.23 REMARK 500 6 ALA A 9 -65.15 -98.74 REMARK 500 6 ALA A 10 34.36 -84.27 REMARK 500 6 GLU A 23 -37.56 -39.76 REMARK 500 6 ASN A 73 81.22 -65.32 REMARK 500 6 ALA A 80 136.22 -33.73 REMARK 500 7 MET A 8 92.76 -62.98 REMARK 500 7 ALA A 9 -64.78 -93.82 REMARK 500 7 ALA A 10 31.09 -91.82 REMARK 500 7 ASN A 73 91.17 -57.22 REMARK 500 7 THR A 92 31.82 -89.96 REMARK 500 7 SER A 94 115.48 -160.09 REMARK 500 8 SER A 6 -60.19 -95.07 REMARK 500 8 GLU A 23 -38.97 -35.35 REMARK 500 8 ALA A 52 -31.65 -35.13 REMARK 500 8 ASN A 73 83.93 -62.90 REMARK 500 8 ALA A 91 -19.68 -47.12 REMARK 500 8 THR A 92 44.96 -106.01 REMARK 500 8 SER A 97 102.35 -39.15 REMARK 500 9 ALA A 52 -30.82 -36.28 REMARK 500 9 ASN A 73 81.35 -64.10 REMARK 500 9 ALA A 80 140.90 -35.05 REMARK 500 9 ALA A 83 124.31 -172.78 REMARK 500 9 THR A 92 42.39 -102.42 REMARK 500 9 TYR A 93 39.84 -83.86 REMARK 500 9 SER A 97 46.96 37.08 REMARK 500 10 SER A 3 115.02 -36.47 REMARK 500 10 SER A 5 97.58 -64.25 REMARK 500 10 GLU A 23 -35.41 -34.31 REMARK 500 10 ALA A 52 -29.06 -38.24 REMARK 500 10 ALA A 80 152.40 -35.93 REMARK 500 10 THR A 92 40.59 -99.68 REMARK 500 11 PRO A 19 1.84 -69.75 REMARK 500 11 ALA A 52 -28.09 -37.44 REMARK 500 11 ASN A 73 86.35 -61.36 REMARK 500 11 ALA A 83 119.72 -167.59 REMARK 500 11 SER A 97 90.43 -59.24 REMARK 500 12 SER A 3 99.16 -66.69 REMARK 500 12 MET A 8 32.34 39.21 REMARK 500 12 GLU A 23 -38.46 -34.41 REMARK 500 12 ALA A 52 -28.38 -39.64 REMARK 500 12 ASN A 73 90.26 -46.21 REMARK 500 12 ALA A 80 149.12 -34.32 REMARK 500 12 THR A 92 31.32 -94.02 REMARK 500 12 PRO A 96 89.11 -69.72 REMARK 500 13 SER A 5 -52.04 -120.90 REMARK 500 13 MET A 8 50.61 -94.62 REMARK 500 13 ALA A 10 33.11 -88.82 REMARK 500 13 GLU A 23 -37.97 -34.37 REMARK 500 13 ALA A 52 -29.30 -36.79 REMARK 500 13 ASN A 73 91.92 -63.71 REMARK 500 13 ALA A 80 134.02 -37.36 REMARK 500 13 THR A 92 42.24 -101.32 REMARK 500 13 TYR A 93 30.89 -84.98 REMARK 500 14 MET A 8 42.02 -86.52 REMARK 500 14 ASN A 73 84.78 -65.73 REMARK 500 14 ALA A 80 130.73 -38.84 REMARK 500 14 ALA A 83 120.79 -172.45 REMARK 500 14 THR A 92 -31.48 -36.79 REMARK 500 14 SER A 94 158.64 -47.25 REMARK 500 14 SER A 97 43.46 -88.13 REMARK 500 15 MET A 8 42.32 -85.91 REMARK 500 15 GLU A 23 -37.45 -38.85 REMARK 500 15 ALA A 52 -30.18 -38.87 REMARK 500 15 ASN A 73 97.67 -31.45 REMARK 500 15 ALA A 80 127.80 -34.35 REMARK 500 15 THR A 92 43.70 -102.34 REMARK 500 15 TYR A 93 39.46 -83.90 REMARK 500 15 SER A 98 109.74 -35.10 REMARK 500 16 ALA A 9 -60.62 -98.28 REMARK 500 16 PRO A 19 3.16 -69.74 REMARK 500 16 GLU A 23 -28.36 -39.57 REMARK 500 16 ALA A 52 -29.60 -36.46 REMARK 500 16 ALA A 63 -70.36 -50.95 REMARK 500 16 ASN A 73 80.44 -59.36 REMARK 500 16 ALA A 80 153.62 -45.19 REMARK 500 16 THR A 92 35.63 -91.87 REMARK 500 17 SER A 3 52.45 -91.10 REMARK 500 17 ALA A 52 -28.05 -39.68 REMARK 500 17 ASN A 73 79.09 -69.73 REMARK 500 17 ALA A 80 122.61 -37.64 REMARK 500 17 ALA A 83 120.96 -173.62 REMARK 500 17 TYR A 93 103.66 -40.18 REMARK 500 17 SER A 94 115.30 -166.91 REMARK 500 18 SER A 2 -60.56 -125.34 REMARK 500 18 PRO A 19 3.25 -69.76 REMARK 500 18 ASN A 73 81.01 -61.33 REMARK 500 18 ALA A 80 135.42 -35.47 REMARK 500 18 ALA A 83 115.63 -167.38 REMARK 500 18 THR A 92 33.05 -90.43 REMARK 500 18 TYR A 93 35.68 33.88 REMARK 500 18 PRO A 96 0.43 -69.80 REMARK 500 19 SER A 2 114.93 -160.65 REMARK 500 19 GLU A 23 -38.35 -34.14 REMARK 500 19 ALA A 52 -29.96 -37.35 REMARK 500 19 ASN A 73 82.40 -67.37 REMARK 500 19 ALA A 80 109.29 -49.70 REMARK 500 19 TYR A 93 51.32 29.90 REMARK 500 20 MET A 8 37.65 39.04 REMARK 500 20 ASN A 73 92.14 -59.84 REMARK 500 20 ALA A 80 127.41 -37.74 REMARK 500 20 ALA A 91 -30.30 -39.27 REMARK 500 20 THR A 92 56.32 -114.57 REMARK 500 20 TYR A 93 174.26 -53.92 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001001121.2 RELATED DB: TARGETDB
DBREF 2DIV A 8 93 GB 12653787 AAH00680 1 86
SEQADV 2DIV GLY A 1 GB 12653787 CLONING ARTIFACT SEQADV 2DIV SER A 2 GB 12653787 CLONING ARTIFACT SEQADV 2DIV SER A 3 GB 12653787 CLONING ARTIFACT SEQADV 2DIV GLY A 4 GB 12653787 CLONING ARTIFACT SEQADV 2DIV SER A 5 GB 12653787 CLONING ARTIFACT SEQADV 2DIV SER A 6 GB 12653787 CLONING ARTIFACT SEQADV 2DIV GLY A 7 GB 12653787 CLONING ARTIFACT SEQADV 2DIV SER A 94 GB 12653787 CLONING ARTIFACT SEQADV 2DIV GLY A 95 GB 12653787 CLONING ARTIFACT SEQADV 2DIV PRO A 96 GB 12653787 CLONING ARTIFACT SEQADV 2DIV SER A 97 GB 12653787 CLONING ARTIFACT SEQADV 2DIV SER A 98 GB 12653787 CLONING ARTIFACT SEQADV 2DIV GLY A 99 GB 12653787 CLONING ARTIFACT
SEQRES 1 A 99 GLY SER SER GLY SER SER GLY MET ALA ALA SER LEU TRP SEQRES 2 A 99 MET GLY ASP LEU GLU PRO TYR MET ASP GLU ASN PHE ILE SEQRES 3 A 99 SER ARG ALA PHE ALA THR MET GLY GLU THR VAL MET SER SEQRES 4 A 99 VAL LYS ILE ILE ARG ASN ARG LEU THR GLY ILE PRO ALA SEQRES 5 A 99 GLY TYR CYS PHE VAL GLU PHE ALA ASP LEU ALA THR ALA SEQRES 6 A 99 GLU LYS CYS LEU HIS LYS ILE ASN GLY LYS PRO LEU PRO SEQRES 7 A 99 GLY ALA THR PRO ALA LYS ARG PHE LYS LEU ASN TYR ALA SEQRES 8 A 99 THR TYR SER GLY PRO SER SER GLY
HELIX 1 1 GLU A 23 MET A 33 1 11 HELIX 2 2 LEU A 62 ILE A 72 1 11
SHEET 1 A 4 SER A 39 ILE A 42 0 SHEET 2 A 4 CYS A 55 GLU A 58 -1 SHEET 3 A 4 SER A 11 MET A 14 -1
CISPEP 1 THR A 81 PRO A 82 1 -0.04 CISPEP 2 THR A 81 PRO A 82 2 -0.07 CISPEP 3 THR A 81 PRO A 82 3 -0.08 CISPEP 4 THR A 81 PRO A 82 4 -0.01 CISPEP 5 THR A 81 PRO A 82 5 0.01 CISPEP 6 THR A 81 PRO A 82 6 -0.09 CISPEP 7 THR A 81 PRO A 82 7 -0.03 CISPEP 8 THR A 81 PRO A 82 8 -0.03 CISPEP 9 THR A 81 PRO A 82 9 -0.03 CISPEP 10 THR A 81 PRO A 82 10 -0.12 CISPEP 11 THR A 81 PRO A 82 11 0.00 CISPEP 12 THR A 81 PRO A 82 12 -0.11 CISPEP 13 THR A 81 PRO A 82 13 -0.01 CISPEP 14 THR A 81 PRO A 82 14 0.02 CISPEP 15 THR A 81 PRO A 82 15 -0.04 CISPEP 16 THR A 81 PRO A 82 16 -0.02 CISPEP 17 THR A 81 PRO A 82 17 -0.06 CISPEP 18 THR A 81 PRO A 82 18 -0.03 CISPEP 19 THR A 81 PRO A 82 19 -0.07 CISPEP 20 THR A 81 PRO A 82 20 -0.07
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000