10 20 30 40 50 60 70 80 2DIL - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CELL ADHESION 30-MAR-06 2DIL
TITLE SOLUTION STRUCTURE OF THE SH3 DOMAIN OF THE HUMAN PROLINE- TITLE 2 SERINE-THREONINE PHOSPHATASE-INTERACTING PROTEIN 1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLINE-SERINE-THREONINE PHOSPHATASE-INTERACTING COMPND 3 PROTEIN 1; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: SH3 DOMAIN; COMPND 6 SYNONYM: PEST PHOSPHATASE-INTERACTING PROTEIN 1, CD2- COMPND 7 BINDING PROTEIN 1, H-PIP; COMPND 8 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PSTPIP1, CD2BP1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050919-13; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS SH3 DOMAIN, PEST PHOSPHATASE-INTERACTING PROTEIN 1, CD2- KEYWDS 2 BINDING PROTEIN 1, CELL ADHESION, STRUCTURAL GENOMICS, KEYWDS 3 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 4 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 5 INITIATIVE, RSGI
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.YONEYAMA,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2DIL 1 VERSN REVDAT 1 27-FEB-07 2DIL 0
JRNL AUTH M.YONEYAMA,N.TOCHIO,S.KOSHIBA,M.INOUE,T.KIGAWA, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SH3 DOMAIN OF THE HUMAN JRNL TITL 2 PROLINE-SERINE-THREONINE PHOSPHATASE-INTERACTING JRNL TITL 3 PROTEIN 1 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DIL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-APR-06. REMARK 100 THE RCSB ID CODE IS RCSB025454.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.07MM SH3 DOMIAN U-15N,13C; REMARK 210 20MM D-TRIS HCL (PH 7.0); REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O' REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9736, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES REMARK 210 WITH THE LEAST RESTRAINT REMARK 210 VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 3 -53.53 -134.04 REMARK 500 1 GLN A 9 96.55 -57.38 REMARK 500 1 ALA A 13 156.32 -45.18 REMARK 500 1 PRO A 22 1.32 -69.72 REMARK 500 1 TYR A 59 32.91 -97.95 REMARK 500 2 SER A 28 119.67 -165.91 REMARK 500 3 SER A 2 42.12 -81.75 REMARK 500 3 ALA A 13 154.47 -45.51 REMARK 500 3 SER A 28 125.73 -171.60 REMARK 500 3 SER A 58 -38.34 -39.65 REMARK 500 3 TYR A 59 36.95 -92.79 REMARK 500 3 SER A 67 111.95 -169.28 REMARK 500 4 SER A 28 113.79 -164.94 REMARK 500 4 LEU A 63 44.32 -93.09 REMARK 500 5 GLU A 24 -179.37 -62.07 REMARK 500 5 SER A 28 117.14 -168.45 REMARK 500 5 ALA A 29 130.70 -39.75 REMARK 500 6 SER A 3 159.42 -46.26 REMARK 500 6 ALA A 8 99.31 -58.95 REMARK 500 6 ALA A 13 160.26 -46.82 REMARK 500 6 ASP A 16 103.65 -52.15 REMARK 500 6 SER A 28 109.31 -162.30 REMARK 500 6 ALA A 29 111.94 -35.15 REMARK 500 6 SER A 67 120.91 -39.09 REMARK 500 7 SER A 28 120.62 -173.83 REMARK 500 7 TYR A 59 30.78 -96.24 REMARK 500 8 ALA A 13 151.67 -48.22 REMARK 500 8 TYR A 59 33.78 -99.33 REMARK 500 9 SER A 5 51.69 -91.51 REMARK 500 9 GLN A 9 160.33 -44.72 REMARK 500 9 ALA A 13 152.75 -48.42 REMARK 500 9 SER A 28 114.18 -173.67 REMARK 500 9 ALA A 29 110.74 -35.01 REMARK 500 9 PRO A 66 1.66 -69.68 REMARK 500 9 SER A 67 48.44 70.01 REMARK 500 10 SER A 2 42.23 -102.74 REMARK 500 10 PRO A 66 88.38 -69.74 REMARK 500 11 ALA A 8 106.49 -48.37 REMARK 500 11 ALA A 13 152.72 -43.79 REMARK 500 11 PRO A 22 0.42 -69.74 REMARK 500 11 ALA A 29 103.64 -51.13 REMARK 500 12 SER A 28 113.49 -171.89 REMARK 500 12 ALA A 29 110.73 -36.97 REMARK 500 12 TYR A 59 33.60 -96.52 REMARK 500 13 SER A 2 122.11 -34.73 REMARK 500 13 GLN A 9 109.86 -52.77 REMARK 500 13 SER A 28 115.76 -172.17 REMARK 500 13 ALA A 29 112.81 -37.80 REMARK 500 14 ALA A 8 116.15 -34.66 REMARK 500 14 ALA A 13 163.89 -46.82 REMARK 500 14 PRO A 22 1.62 -69.72 REMARK 500 14 SER A 28 117.44 -173.17 REMARK 500 15 ASP A 16 108.51 -54.70 REMARK 500 15 PRO A 22 0.11 -69.73 REMARK 500 15 SER A 28 107.74 -172.48 REMARK 500 15 ALA A 29 134.45 -37.38 REMARK 500 15 TYR A 59 32.87 -98.69 REMARK 500 15 SER A 64 176.00 -52.44 REMARK 500 15 PRO A 66 89.43 -69.81 REMARK 500 16 ALA A 29 129.27 -37.69 REMARK 500 16 ASN A 49 27.25 49.93 REMARK 500 16 TYR A 59 35.34 -98.04 REMARK 500 16 PRO A 66 2.83 -69.80 REMARK 500 17 ALA A 13 159.31 -42.56 REMARK 500 17 SER A 28 124.13 -172.56 REMARK 500 17 SER A 67 99.88 -48.97 REMARK 500 18 SER A 3 173.05 -55.11 REMARK 500 18 ALA A 13 163.86 -42.39 REMARK 500 18 ASP A 16 93.94 -69.32 REMARK 500 18 SER A 28 114.02 -172.54 REMARK 500 19 SER A 6 -50.09 -123.39 REMARK 500 19 PRO A 22 1.97 -69.77 REMARK 500 19 SER A 28 116.31 -172.12 REMARK 500 20 PRO A 22 1.14 -69.71 REMARK 500 20 SER A 28 108.25 -163.81 REMARK 500 20 ALA A 29 121.91 -39.82 REMARK 500 20 LEU A 63 92.40 -64.09 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2DIL A 8 63 UNP O43586 PPIP1_HUMAN 361 416
SEQADV 2DIL GLY A 1 UNP O43586 CLONING ARTIFACT SEQADV 2DIL SER A 2 UNP O43586 CLONING ARTIFACT SEQADV 2DIL SER A 3 UNP O43586 CLONING ARTIFACT SEQADV 2DIL GLY A 4 UNP O43586 CLONING ARTIFACT SEQADV 2DIL SER A 5 UNP O43586 CLONING ARTIFACT SEQADV 2DIL SER A 6 UNP O43586 CLONING ARTIFACT SEQADV 2DIL GLY A 7 UNP O43586 CLONING ARTIFACT SEQADV 2DIL SER A 64 UNP O43586 CLONING ARTIFACT SEQADV 2DIL GLY A 65 UNP O43586 CLONING ARTIFACT SEQADV 2DIL PRO A 66 UNP O43586 CLONING ARTIFACT SEQADV 2DIL SER A 67 UNP O43586 CLONING ARTIFACT SEQADV 2DIL SER A 68 UNP O43586 CLONING ARTIFACT SEQADV 2DIL GLY A 69 UNP O43586 CLONING ARTIFACT
SEQRES 1 A 69 GLY SER SER GLY SER SER GLY ALA GLN GLU TYR ARG ALA SEQRES 2 A 69 LEU TYR ASP TYR THR ALA GLN ASN PRO ASP GLU LEU ASP SEQRES 3 A 69 LEU SER ALA GLY ASP ILE LEU GLU VAL ILE LEU GLU GLY SEQRES 4 A 69 GLU ASP GLY TRP TRP THR VAL GLU ARG ASN GLY GLN ARG SEQRES 5 A 69 GLY PHE VAL PRO GLY SER TYR LEU GLU LYS LEU SER GLY SEQRES 6 A 69 PRO SER SER GLY
HELIX 1 1 SER A 58 LEU A 60 5 3
SHEET 1 A 4 GLU A 10 ARG A 12 0 SHEET 2 A 4 ILE A 32 LEU A 37 -1 O LEU A 33 N TYR A 11 SHEET 3 A 4 TRP A 43 ARG A 48 -1 O THR A 45 N ILE A 36 SHEET 4 A 4 GLN A 51 PRO A 56 -1 O GLN A 51 N ARG A 48
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000