10 20 30 40 50 60 70 80 2DGX - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 16-MAR-06 2DGX
TITLE SOLUTION STRUCTURE OF THE RNA RECOGNITION MOTIF IN KIAA0430 TITLE 2 PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: KIAA0430 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIAA0430; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050822-19; SOURCE 9 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS RRM DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA KEYWDS 4 BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 2DGX 1 VERSN REVDAT 1 16-SEP-06 2DGX 0
JRNL AUTH C.ABE,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, JRNL AUTH 2 S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE RNA RECOGNITION MOTIF IN JRNL TITL 2 KIAA0430 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2DGX COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-MAR-06. REMARK 100 THE RCSB ID CODE IS RCSB025405.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 100MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM D-TRIS-HCL(PH7.0), 100MM REMARK 210 NACL, 1MM D-DTT, 0.02% NAN3, REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.932, CYANA 2.0 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 550 158.61 -48.12 REMARK 500 1 ASP A 563 96.49 -57.59 REMARK 500 1 LEU A 571 -61.85 -90.08 REMARK 500 1 GLN A 597 37.83 -86.81 REMARK 500 1 LYS A 621 87.37 -54.20 REMARK 500 2 ASP A 563 101.75 -58.42 REMARK 500 2 TYR A 596 -26.03 -39.55 REMARK 500 2 GLN A 597 37.41 -83.35 REMARK 500 2 LYS A 621 89.83 -53.21 REMARK 500 2 SER A 636 41.92 -94.37 REMARK 500 3 ASP A 563 94.91 -55.51 REMARK 500 3 HIS A 582 -62.88 -94.62 REMARK 500 3 GLN A 597 31.03 -88.66 REMARK 500 3 LYS A 621 88.96 -53.95 REMARK 500 4 ASP A 563 87.87 -49.77 REMARK 500 4 HIS A 582 -64.18 -91.95 REMARK 500 4 TYR A 596 -29.20 -39.94 REMARK 500 4 GLN A 597 37.36 -83.75 REMARK 500 4 HIS A 618 121.98 -38.44 REMARK 500 4 LYS A 621 94.29 -54.62 REMARK 500 5 SER A 550 41.09 35.99 REMARK 500 5 ASP A 563 88.37 -54.06 REMARK 500 5 HIS A 582 -66.80 -94.05 REMARK 500 5 THR A 594 36.33 -93.97 REMARK 500 5 TYR A 596 -29.34 -38.48 REMARK 500 5 GLN A 597 35.40 -83.76 REMARK 500 5 LYS A 621 91.04 -47.29 REMARK 500 5 SER A 640 -60.70 -94.07 REMARK 500 6 SER A 551 -58.54 -130.21 REMARK 500 6 ASN A 553 104.60 -44.92 REMARK 500 6 ASP A 563 101.40 -48.04 REMARK 500 6 LEU A 566 165.77 -45.59 REMARK 500 6 LYS A 621 88.33 -52.76 REMARK 500 6 THR A 633 97.37 -58.94 REMARK 500 6 SER A 636 42.37 -106.41 REMARK 500 6 PRO A 638 89.15 -69.77 REMARK 500 7 GLN A 597 38.71 -82.68 REMARK 500 7 LYS A 621 88.92 -53.13 REMARK 500 7 THR A 633 174.91 -55.49 REMARK 500 7 ALA A 635 142.25 -174.02 REMARK 500 8 SER A 548 95.78 -52.42 REMARK 500 8 SER A 551 -60.31 -105.56 REMARK 500 8 ASP A 563 85.70 -61.87 REMARK 500 8 HIS A 582 -70.33 -87.58 REMARK 500 8 TYR A 596 -28.76 -39.74 REMARK 500 8 GLN A 597 38.36 -82.77 REMARK 500 8 HIS A 618 122.03 -36.73 REMARK 500 8 LYS A 621 90.79 -56.47 REMARK 500 9 SER A 548 130.73 -173.02 REMARK 500 9 ASP A 563 92.49 -62.77 REMARK 500 9 TYR A 596 -30.76 -36.69 REMARK 500 9 GLN A 597 35.86 -83.75 REMARK 500 9 LYS A 621 92.86 -50.94 REMARK 500 9 PRO A 638 -178.27 -69.74 REMARK 500 10 SER A 550 99.99 -45.32 REMARK 500 10 TYR A 596 -32.00 -35.79 REMARK 500 10 GLN A 597 39.65 -82.35 REMARK 500 10 LYS A 621 94.35 -48.33 REMARK 500 11 SER A 551 149.12 -39.76 REMARK 500 11 ASN A 553 41.95 -83.41 REMARK 500 11 ASP A 563 109.50 -54.43 REMARK 500 11 LEU A 566 163.18 -43.33 REMARK 500 11 HIS A 582 -61.91 -90.66 REMARK 500 11 GLN A 597 39.15 -83.56 REMARK 500 11 LYS A 621 91.79 -52.96 REMARK 500 12 ASP A 563 91.69 -47.57 REMARK 500 12 GLN A 597 41.13 -81.40 REMARK 500 12 ASP A 609 -38.07 -38.52 REMARK 500 12 LYS A 621 92.29 -50.00 REMARK 500 13 ASP A 563 94.78 -41.87 REMARK 500 13 HIS A 582 -67.39 -91.29 REMARK 500 13 TYR A 596 -27.90 -38.71 REMARK 500 13 GLN A 597 38.72 -83.77 REMARK 500 13 LYS A 621 94.33 -50.67 REMARK 500 13 SER A 640 116.53 -168.73 REMARK 500 14 SER A 550 133.93 -38.84 REMARK 500 14 ASP A 563 93.91 -34.79 REMARK 500 14 LEU A 566 178.68 -54.32 REMARK 500 14 TYR A 596 -29.46 -36.98 REMARK 500 14 GLN A 597 38.35 -84.80 REMARK 500 14 LYS A 621 92.15 -52.09 REMARK 500 14 THR A 633 100.11 -50.78 REMARK 500 15 SER A 547 -53.05 -124.57 REMARK 500 15 ASP A 563 84.38 -58.45 REMARK 500 15 ARG A 565 -37.61 -38.20 REMARK 500 15 TYR A 596 -18.67 -49.88 REMARK 500 15 LYS A 621 90.87 -53.62 REMARK 500 16 ASN A 553 42.42 36.83 REMARK 500 16 ASP A 563 97.88 -44.82 REMARK 500 16 HIS A 582 -66.54 -95.14 REMARK 500 16 TYR A 596 -30.13 -37.99 REMARK 500 16 GLN A 597 38.31 -83.90 REMARK 500 16 HIS A 618 123.34 -37.93 REMARK 500 16 LYS A 621 96.25 -54.27 REMARK 500 16 PRO A 638 2.72 -69.73 REMARK 500 17 ASP A 563 93.87 -41.77 REMARK 500 17 HIS A 582 -65.93 -92.97 REMARK 500 17 LYS A 621 92.16 -51.50 REMARK 500 18 ASP A 563 90.59 -51.14 REMARK 500 18 GLN A 597 36.41 -87.22 REMARK 500 18 LYS A 621 98.61 -56.51 REMARK 500 19 GLN A 597 42.04 -85.09 REMARK 500 19 LYS A 621 99.78 -54.97 REMARK 500 19 SER A 636 157.48 -48.39 REMARK 500 20 HIS A 582 -67.50 -90.92 REMARK 500 20 TYR A 596 -30.12 -38.18 REMARK 500 20 GLN A 597 38.61 -82.44 REMARK 500 20 HIS A 618 118.80 -36.93 REMARK 500 20 LYS A 621 92.95 -51.18 REMARK 500 20 SER A 639 53.97 39.81 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002100419.1 RELATED DB: TARGETDB
DBREF 2DGX A 553 635 UNP Q9Y4J9 Q9Y4J9_HUMAN 227 309
SEQADV 2DGX GLY A 546 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 547 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 548 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX GLY A 549 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 550 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 551 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX GLY A 552 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 636 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX GLY A 637 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX PRO A 638 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 639 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX SER A 640 UNP Q9Y4J9 CLONING ARTIFACT SEQADV 2DGX GLY A 641 UNP Q9Y4J9 CLONING ARTIFACT
SEQRES 1 A 96 GLY SER SER GLY SER SER GLY ASN GLY ALA ASP VAL GLN SEQRES 2 A 96 VAL SER ASN ILE ASP TYR ARG LEU SER ARG LYS GLU LEU SEQRES 3 A 96 GLN GLN LEU LEU GLN GLU ALA PHE ALA ARG HIS GLY LYS SEQRES 4 A 96 VAL LYS SER VAL GLU LEU SER PRO HIS THR ASP TYR GLN SEQRES 5 A 96 LEU LYS ALA VAL VAL GLN MET GLU ASN LEU GLN ASP ALA SEQRES 6 A 96 ILE GLY ALA VAL ASN SER LEU HIS ARG TYR LYS ILE GLY SEQRES 7 A 96 SER LYS LYS ILE LEU VAL SER LEU ALA THR GLY ALA SER SEQRES 8 A 96 GLY PRO SER SER GLY
HELIX 1 1 SER A 567 GLY A 583 1 17 HELIX 2 2 ASN A 606 HIS A 618 1 13
SHEET 1 A 5 VAL A 585 LEU A 590 0 SHEET 2 A 5 ALA A 600 MET A 604 -1 O GLN A 603 N LYS A 586 SHEET 3 A 5 ALA A 555 SER A 560 -1 N VAL A 559 O ALA A 600 SHEET 4 A 5 LYS A 625 LEU A 631 -1 O LEU A 628 N SER A 560 SHEET 5 A 5 TYR A 620 ILE A 622 -1 N ILE A 622 O LYS A 625
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000