10 20 30 40 50 60 70 80 2D1U - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER METAL TRANSPORT 01-SEP-05 2D1U
TITLE SOLUTION STRCUTURE OF THE PERIPLASMIC SIGNALING DOMAIN OF TITLE 2 FECA FROM ESCHERICHIA COLI
COMPND MOL_ID: 1; COMPND 2 MOLECULE: IRON(III) DICITRATE TRANSPORT PROTEIN FECA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PERIPLASMIC SIGNALING DOMAIN; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FECA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30A
KEYWDS FECA, SURFACE SIGNALING, IRON-UPTAKE, METAL TRANSPORT
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR A.GARCIA-HERRERO,H.J.VOGEL
REVDAT 2 24-FEB-09 2D1U 1 VERSN REVDAT 1 27-DEC-05 2D1U 0
JRNL AUTH A.GARCIA-HERRERO,H.J.VOGEL JRNL TITL NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF JRNL TITL 2 THE PERIPLASMIC SIGNALLING DOMAIN OF THE JRNL TITL 3 TONB-DEPENDENT OUTER MEMBRANE TRANSPORTER FECA JRNL TITL 4 FROM ESCHERICHIA COLI JRNL REF MOL.MICROBIOL. V. 58 1226 2005 JRNL REFN ISSN 0950-382X JRNL PMID 16313612 JRNL DOI 10.1111/J.1365-2958.2005.04889.X
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0 REMARK 3 AUTHORS : PETER GUNTERT REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2D1U COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-SEP-05. REMARK 100 THE RCSB ID CODE IS RCSB024883.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 50MM SODIUM PHOSPHATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM NTFECA U-15N; 50MM REMARK 210 PHOSPHATE BUFFER; 90% H20, 10% REMARK 210 D2O; 1MM NTFECA U-15N, 13C; REMARK 210 50MM PHOSPHATE BUFFER PH6; 90% REMARK 210 H20, 10% D2O; 1MM NTFECA U- REMARK 210 15N; 50MM PHOSPHATE BUFFER; REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_ROESY, 3D_ REMARK 210 13C-SEPARATED_NOESY, 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA 2.0, NMRVIEW 5.0.4, REMARK 210 NMRPIPE 2.3 REV REMARK 210 2004.194.17.02, XWINNMR 3.0 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 7 -164.67 -69.78 REMARK 500 1 SER A 9 118.33 179.01 REMARK 500 1 ASP A 28 97.77 -58.40 REMARK 500 1 ARG A 33 100.25 -56.38 REMARK 500 1 HIS A 41 101.43 -161.15 REMARK 500 1 ASP A 45 -175.05 -67.04 REMARK 500 1 ASN A 66 -83.19 -58.98 REMARK 500 1 LYS A 78 104.32 -52.64 REMARK 500 2 PRO A 7 -164.46 -69.80 REMARK 500 2 SER A 9 127.82 179.85 REMARK 500 2 HIS A 41 100.85 -161.00 REMARK 500 2 ASP A 45 -175.16 -60.90 REMARK 500 2 LEU A 64 -61.91 -124.33 REMARK 500 2 ALA A 76 160.96 -49.23 REMARK 500 2 LYS A 78 89.27 51.51 REMARK 500 2 GLU A 79 118.69 -178.83 REMARK 500 2 LEU A 82 74.06 -106.52 REMARK 500 2 LEU A 89 46.56 -90.14 REMARK 500 3 PRO A 7 -164.41 -69.80 REMARK 500 3 SER A 9 121.83 -173.41 REMARK 500 3 ASP A 28 102.08 -51.48 REMARK 500 3 HIS A 41 101.24 -161.44 REMARK 500 3 ASP A 45 -175.96 -59.18 REMARK 500 3 LEU A 64 -64.41 -125.14 REMARK 500 3 ASN A 66 91.34 -68.74 REMARK 500 3 ASP A 80 -176.95 -58.83 REMARK 500 3 LEU A 82 55.24 -102.70 REMARK 500 3 TRP A 88 97.94 58.59 REMARK 500 3 ASP A 91 53.77 -116.51 REMARK 500 4 PRO A 7 -160.85 -69.69 REMARK 500 4 SER A 9 117.44 -179.54 REMARK 500 4 ASP A 28 94.28 -63.97 REMARK 500 4 HIS A 41 101.01 -160.69 REMARK 500 4 ASP A 45 -174.74 -60.27 REMARK 500 4 LEU A 64 -62.38 -124.74 REMARK 500 4 ASN A 66 86.74 -68.12 REMARK 500 5 PRO A 7 -164.61 -69.76 REMARK 500 5 SER A 9 123.14 179.44 REMARK 500 5 SER A 21 -65.69 -90.92 REMARK 500 5 ASP A 28 97.81 -57.24 REMARK 500 5 HIS A 41 101.54 -162.21 REMARK 500 5 ASP A 45 -175.33 -59.65 REMARK 500 5 LEU A 64 -62.09 -123.54 REMARK 500 5 GLU A 94 129.80 -171.73 REMARK 500 5 ASN A 95 135.43 -173.19 REMARK 500 5 LEU A 97 116.03 -166.82 REMARK 500 5 GLU A 98 113.13 -164.32 REMARK 500 5 HIS A 100 -73.95 -84.21 REMARK 500 6 PRO A 7 -165.07 -69.79 REMARK 500 6 SER A 9 121.45 179.59 REMARK 500 6 ASP A 28 103.27 -51.16 REMARK 500 6 HIS A 41 101.31 -161.36 REMARK 500 6 ASP A 45 -175.14 -62.97 REMARK 500 6 LEU A 64 -64.28 -123.27 REMARK 500 6 ASN A 66 89.80 -66.01 REMARK 500 6 ASN A 67 38.72 39.09 REMARK 500 7 PRO A 7 -164.14 -69.70 REMARK 500 7 SER A 9 113.69 179.74 REMARK 500 7 ASP A 28 107.07 -50.75 REMARK 500 7 HIS A 41 101.14 -160.89 REMARK 500 7 ASP A 45 -179.43 -59.15 REMARK 500 7 ASN A 66 -83.52 -61.20 REMARK 500 8 PRO A 7 -164.91 -69.74 REMARK 500 8 SER A 9 123.06 179.43 REMARK 500 8 ASP A 28 99.45 -56.22 REMARK 500 8 ARG A 33 100.09 -56.54 REMARK 500 8 HIS A 41 102.00 -161.56 REMARK 500 8 ASP A 45 -174.84 -63.51 REMARK 500 8 ASN A 66 -82.23 -62.94 REMARK 500 8 ASP A 80 114.98 -163.17 REMARK 500 8 THR A 83 57.28 -102.70 REMARK 500 8 TRP A 88 96.90 58.41 REMARK 500 9 PRO A 7 -164.11 -69.74 REMARK 500 9 SER A 9 104.07 178.67 REMARK 500 9 ASP A 28 95.98 -67.24 REMARK 500 9 HIS A 41 101.13 -160.78 REMARK 500 9 ASP A 45 -174.88 -59.14 REMARK 500 9 LEU A 64 -62.22 -124.16 REMARK 500 9 GLU A 94 -175.78 -61.64 REMARK 500 9 ASP A 96 42.94 -103.36 REMARK 500 9 HIS A 102 -57.54 -130.83 REMARK 500 10 PRO A 7 -163.44 -69.79 REMARK 500 10 SER A 9 112.68 178.99 REMARK 500 10 SER A 21 -60.61 -90.24 REMARK 500 10 ASP A 45 -177.14 -57.71 REMARK 500 10 LEU A 64 -64.10 -123.61 REMARK 500 10 ASN A 66 89.73 -66.30 REMARK 500 10 ASN A 67 38.60 39.12 REMARK 500 10 ALA A 76 160.17 62.93 REMARK 500 11 PRO A 7 -164.10 -69.79 REMARK 500 11 SER A 9 107.37 -179.98 REMARK 500 11 ASP A 28 102.30 -52.54 REMARK 500 11 ARG A 33 102.59 -57.06 REMARK 500 11 HIS A 41 101.19 -160.74 REMARK 500 11 ASP A 45 -174.80 -59.46 REMARK 500 11 LEU A 64 -60.75 -124.98 REMARK 500 11 LYS A 78 -75.75 -61.68 REMARK 500 11 ALA A 81 -176.20 -67.75 REMARK 500 11 LEU A 82 57.09 -116.20 REMARK 500 11 ALA A 92 54.44 -103.34 REMARK 500 12 PRO A 7 -164.33 -69.76 REMARK 500 12 SER A 9 111.82 178.87 REMARK 500 12 ARG A 33 106.44 -52.31 REMARK 500 12 HIS A 41 101.09 -160.88 REMARK 500 12 ASP A 45 -176.34 -58.41 REMARK 500 12 LEU A 64 -59.49 -127.01 REMARK 500 12 ASN A 66 85.96 -69.12 REMARK 500 12 ASP A 80 124.48 -172.67 REMARK 500 12 HIS A 100 55.53 -94.20 REMARK 500 13 PRO A 7 -164.25 -69.72 REMARK 500 13 SER A 9 108.24 178.29 REMARK 500 13 ASP A 28 100.94 -54.86 REMARK 500 13 ARG A 33 95.62 -60.44 REMARK 500 13 HIS A 41 101.18 -160.82 REMARK 500 13 ASP A 45 -174.87 -59.91 REMARK 500 13 LEU A 64 -63.72 -126.27 REMARK 500 13 ASN A 67 29.42 46.21 REMARK 500 13 THR A 83 170.31 -58.32 REMARK 500 13 ASP A 91 49.92 -100.39 REMARK 500 14 PRO A 7 -164.58 -69.76 REMARK 500 14 SER A 9 101.05 178.88 REMARK 500 14 SER A 21 -63.83 -90.85 REMARK 500 14 ASP A 28 98.50 -57.86 REMARK 500 14 HIS A 41 101.31 -161.43 REMARK 500 14 ASP A 45 -175.63 -61.93 REMARK 500 14 LEU A 64 -64.10 -127.00 REMARK 500 14 VAL A 85 59.49 -112.53 REMARK 500 14 ASP A 91 72.54 -110.24 REMARK 500 14 HIS A 99 115.80 -167.52 REMARK 500 15 PRO A 7 -164.85 -69.80 REMARK 500 15 SER A 9 105.40 179.29 REMARK 500 15 ARG A 33 108.92 -51.66 REMARK 500 15 HIS A 41 101.57 -161.49 REMARK 500 15 ASP A 45 -175.62 -61.06 REMARK 500 15 LEU A 64 -64.36 -123.54 REMARK 500 15 ASN A 66 86.47 -67.61 REMARK 500 15 LEU A 97 71.33 -113.33 REMARK 500 15 GLU A 98 59.25 -100.77 REMARK 500 15 HIS A 102 42.45 38.59 REMARK 500 16 PRO A 7 -163.94 -69.79 REMARK 500 16 SER A 9 106.92 178.69 REMARK 500 16 SER A 21 -63.89 -90.21 REMARK 500 16 ARG A 33 103.59 -50.98 REMARK 500 16 HIS A 41 101.17 -161.45 REMARK 500 16 ASP A 45 179.30 -57.71 REMARK 500 16 LEU A 64 -64.47 -124.49 REMARK 500 16 ASN A 66 89.69 -66.32 REMARK 500 16 ASN A 67 37.68 39.46 REMARK 500 16 ALA A 81 -40.83 -132.76 REMARK 500 16 GLU A 94 74.94 56.74 REMARK 500 16 ASN A 95 70.74 51.50 REMARK 500 17 PRO A 7 -163.17 -69.75 REMARK 500 17 SER A 9 110.09 179.67 REMARK 500 17 ASP A 28 94.89 -61.51 REMARK 500 17 HIS A 41 101.21 -160.52 REMARK 500 17 ASP A 45 -175.38 -58.62 REMARK 500 17 LEU A 64 -62.42 -124.50 REMARK 500 17 GLU A 79 95.51 -174.68 REMARK 500 17 VAL A 85 -179.14 -64.42 REMARK 500 17 HIS A 103 67.50 -119.90 REMARK 500 18 PRO A 7 -163.14 -69.78 REMARK 500 18 SER A 9 130.88 178.28 REMARK 500 18 HIS A 41 101.48 -160.75 REMARK 500 18 ASP A 45 -174.85 -58.90 REMARK 500 18 ASN A 66 -82.16 -62.68 REMARK 500 18 LYS A 78 103.36 -53.88 REMARK 500 18 ASP A 91 51.27 -116.18 REMARK 500 19 PRO A 7 -164.47 -69.76 REMARK 500 19 SER A 9 111.14 179.45 REMARK 500 19 ASP A 28 103.67 -50.80 REMARK 500 19 ARG A 33 -75.58 -45.47 REMARK 500 19 HIS A 41 101.08 -160.59 REMARK 500 19 ASP A 45 -176.37 -58.08 REMARK 500 19 ASN A 66 63.20 66.69 REMARK 500 19 ALA A 81 56.84 -100.47 REMARK 500 19 ASN A 95 170.32 -58.34 REMARK 500 20 PRO A 7 -164.33 -69.73 REMARK 500 20 SER A 9 122.15 178.84 REMARK 500 20 ARG A 33 104.67 -48.82 REMARK 500 20 HIS A 41 101.02 -160.87 REMARK 500 20 ASP A 45 -176.89 -67.20 REMARK 500 20 ASN A 66 -81.33 -65.93 REMARK 500 20 LYS A 78 39.88 38.72 REMARK 500 20 TRP A 88 148.61 -174.96 REMARK 500 20 LEU A 89 -73.83 -101.86 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6803 RELATED DB: BMRB
DBREF 2D1U A 1 96 UNP P13036 FECA_ECOLI 34 129
SEQADV 2D1U LEU A 97 UNP P13036 EXPRESSION TAG SEQADV 2D1U GLU A 98 UNP P13036 EXPRESSION TAG SEQADV 2D1U HIS A 99 UNP P13036 EXPRESSION TAG SEQADV 2D1U HIS A 100 UNP P13036 EXPRESSION TAG SEQADV 2D1U HIS A 101 UNP P13036 EXPRESSION TAG SEQADV 2D1U HIS A 102 UNP P13036 EXPRESSION TAG SEQADV 2D1U HIS A 103 UNP P13036 EXPRESSION TAG SEQADV 2D1U HIS A 104 UNP P13036 EXPRESSION TAG
SEQRES 1 A 104 ALA GLN VAL ASN ILE ALA PRO GLY SER LEU ASP LYS ALA SEQRES 2 A 104 LEU ASN GLN TYR ALA ALA HIS SER GLY PHE THR LEU SER SEQRES 3 A 104 VAL ASP ALA SER LEU THR ARG GLY LYS GLN SER ASN GLY SEQRES 4 A 104 LEU HIS GLY ASP TYR ASP VAL GLU SER GLY LEU GLN GLN SEQRES 5 A 104 LEU LEU ASP GLY SER GLY LEU GLN VAL LYS PRO LEU GLY SEQRES 6 A 104 ASN ASN SER TRP THR LEU GLU PRO ALA PRO ALA PRO LYS SEQRES 7 A 104 GLU ASP ALA LEU THR VAL VAL GLY ASP TRP LEU GLY ASP SEQRES 8 A 104 ALA ARG GLU ASN ASP LEU GLU HIS HIS HIS HIS HIS HIS
HELIX 1 1 SER A 9 GLY A 22 1 14 HELIX 2 2 ASP A 28 ARG A 33 1 6 HELIX 3 3 ASP A 45 LEU A 54 1 10
SHEET 1 A 2 GLN A 2 ASN A 4 0 SHEET 2 A 2 HIS A 41 ASP A 43 -1 O GLY A 42 N VAL A 3 SHEET 1 B 3 THR A 24 LEU A 25 0 SHEET 2 B 3 SER A 68 PRO A 73 1 O TRP A 69 N THR A 24 SHEET 3 B 3 LEU A 59 PRO A 63 -1 N GLN A 60 O GLU A 72
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000