10 20 30 40 50 60 70 80 2CZY - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER GENE REGULATION 20-JUL-05 2CZY
TITLE SOLUTION STRUCTURE OF THE NRSF/REST-MSIN3B PAH1 COMPLEX
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAIRED AMPHIPATHIC HELIX PROTEIN SIN3B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PAH1 DOMAIN (RESIDUES 31-107); COMPND 5 SYNONYM: SIN3B, TRANSCRIPTIONAL COREPRESSOR SIN3B, HISTONE COMPND 6 DEACETYLASE COMPLEX SUBUNIT SIN3B; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TRANSCRIPTION FACTOR REST (VERSION 3); COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: SIN3 INTERACTION DOMAIN (RESIDUES 43-57); COMPND 12 SYNONYM: NRSF/REST; COMPND 13 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SIN3B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HUMANS.
KEYWDS NRSF, SIN3, PAH1, TRANSCRIPTIONAL REPRESSOR, GENE REGULATION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR M.NOMURA,H.UDA-TOCHIO,K.MURAI,N.MORI,Y.NISHIMURA
REVDAT 2 24-FEB-09 2CZY 1 VERSN REVDAT 1 20-DEC-05 2CZY 0
JRNL AUTH M.NOMURA,H.UDA-TOCHIO,K.MURAI,N.MORI,Y.NISHIMURA JRNL TITL THE NEURAL REPRESSOR NRSF/REST BINDS THE PAH1 JRNL TITL 2 DOMAIN OF THE SIN3 COREPRESSOR BY USING ITS JRNL TITL 3 DISTINCT SHORT HYDROPHOBIC HELIX JRNL REF J.MOL.BIOL. V. 354 903 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 16288918 JRNL DOI 10.1016/J.JMB.2005.10.008
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CZY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-JUL-05. REMARK 100 THE RCSB ID CODE IS RCSB024815.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 20MM POTASSIUM PHOSPHATE REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5-0.8MM PAH1 U-15N,13C; REMARK 210 0.5-0.8MM SID; 20MM POTASSIUM REMARK 210 PHOSPHATE BUFFER; 0.5-0.8MM REMARK 210 PAH1 U-15N,13C; 0.5-0.8MM SID; REMARK 210 20MM POTASSIUM PHOSPHATE BUFFER REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 2D_X- REMARK 210 FILTERED_NOESY, HNHA, 3D_13C-SEPARATED_NOESY, 3D_13C-FILTERED_ REMARK 210 13C-EDITED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 2004, NMRVIEW 5.0.4 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 32 83.88 -67.62 REMARK 500 1 GLN A 68 39.51 71.38 REMARK 500 1 PHE A 83 51.11 -107.03 REMARK 500 1 THR B 55 78.47 -169.98 REMARK 500 2 HIS A 33 -161.58 -106.34 REMARK 500 2 GLN A 68 40.57 70.90 REMARK 500 2 PHE A 83 61.05 -106.55 REMARK 500 2 THR B 55 93.61 -171.90 REMARK 500 3 VAL A 32 83.12 -63.10 REMARK 500 3 GLN A 68 45.06 74.83 REMARK 500 3 THR B 55 93.25 -171.83 REMARK 500 4 PHE A 83 58.79 -116.31 REMARK 500 4 THR B 55 93.82 -172.40 REMARK 500 5 VAL A 32 77.55 -65.71 REMARK 500 5 HIS A 33 -169.76 -123.47 REMARK 500 5 PHE A 83 54.02 -111.78 REMARK 500 5 THR B 55 71.00 -167.65 REMARK 500 6 VAL A 32 86.45 -70.00 REMARK 500 6 GLN A 68 43.84 75.26 REMARK 500 6 TYR A 101 68.77 -104.34 REMARK 500 6 ILE A 105 84.28 -154.68 REMARK 500 6 THR B 55 70.04 -170.85 REMARK 500 7 VAL A 32 91.37 -63.20 REMARK 500 7 GLN A 68 39.82 70.04 REMARK 500 7 PHE A 83 52.67 -112.67 REMARK 500 7 THR B 55 84.69 -167.89 REMARK 500 8 VAL A 32 -81.40 -60.22 REMARK 500 8 GLN A 68 41.05 73.87 REMARK 500 8 PHE A 83 53.47 -106.87 REMARK 500 8 PHE A 96 30.32 -100.00 REMARK 500 8 PRO A 98 176.96 -53.38 REMARK 500 8 THR B 55 70.23 -172.51 REMARK 500 9 HIS A 33 -161.71 -125.98 REMARK 500 9 SER A 50 42.31 -107.90 REMARK 500 9 PHE A 83 50.03 -119.92 REMARK 500 9 PRO A 98 177.03 -53.63 REMARK 500 9 TYR A 101 75.13 -102.55 REMARK 500 9 THR B 55 79.27 -170.36 REMARK 500 10 VAL A 32 82.12 -62.80 REMARK 500 10 HIS A 33 -164.51 -115.81 REMARK 500 10 GLN A 68 53.76 71.93 REMARK 500 10 PHE A 83 55.81 -114.62 REMARK 500 10 ILE A 105 80.11 -162.07 REMARK 500 10 THR B 55 84.10 -171.06 REMARK 500 11 THR B 55 78.11 -171.41 REMARK 500 12 VAL A 32 75.69 -66.93 REMARK 500 12 HIS A 33 -165.70 -119.20 REMARK 500 12 GLN A 68 49.38 71.02 REMARK 500 12 PHE A 83 61.67 -107.26 REMARK 500 12 PHE A 96 30.03 -99.79 REMARK 500 12 THR B 55 76.19 -170.47 REMARK 500 13 VAL A 32 83.28 -62.62 REMARK 500 13 HIS A 33 -165.68 -117.35 REMARK 500 13 GLN A 68 40.93 74.02 REMARK 500 13 PRO A 98 176.92 -53.01 REMARK 500 13 THR B 55 87.40 -167.37 REMARK 500 14 HIS A 33 -160.39 -129.23 REMARK 500 14 PHE A 83 42.42 -109.08 REMARK 500 15 VAL A 32 82.23 -68.98 REMARK 500 15 HIS A 33 -162.85 -122.53 REMARK 500 15 GLN A 68 51.88 72.27 REMARK 500 15 SER A 69 -54.29 -130.77 REMARK 500 15 PHE A 83 49.81 -104.63 REMARK 500 15 THR B 55 73.59 -167.54 REMARK 500 16 HIS A 33 -163.66 -63.98 REMARK 500 16 GLN A 68 44.62 70.81 REMARK 500 16 PHE A 83 56.29 -113.10 REMARK 500 17 VAL A 32 80.08 -65.34 REMARK 500 17 GLN A 68 43.93 73.95 REMARK 500 17 PRO A 98 177.02 -55.07 REMARK 500 17 ASP A 104 -177.25 -61.25 REMARK 500 17 THR B 55 70.56 -169.79 REMARK 500 18 HIS A 33 100.09 -168.90 REMARK 500 18 PHE A 83 61.87 -118.22 REMARK 500 18 TYR A 101 54.00 -94.19 REMARK 500 18 ARG A 102 -174.53 -66.28 REMARK 500 19 VAL A 32 81.86 -63.72 REMARK 500 19 PRO A 98 177.07 -51.47 REMARK 500 19 THR B 55 71.92 -168.67 REMARK 500 20 VAL A 32 79.07 -65.04 REMARK 500 20 PHE A 83 60.47 -104.61 REMARK 500 20 HIS A 84 31.25 -95.07 REMARK 500 20 GLU A 85 -46.06 -140.01 REMARK 500 20 PHE A 96 30.07 -99.74 REMARK 500 20 ILE A 105 78.38 -110.17 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
DBREF 2CZY A 31 107 UNP Q62141 SIN3B_MOUSE 31 107 DBREF 2CZY B 43 57 UNP Q13127 Q13127_HUMAN 43 57
SEQRES 1 A 77 PRO VAL HIS VAL GLU ASP ALA LEU THR TYR LEU ASP GLN SEQRES 2 A 77 VAL LYS ILE ARG PHE GLY SER ASP PRO ALA THR TYR ASN SEQRES 3 A 77 GLY PHE LEU GLU ILE MET LYS GLU PHE LYS SER GLN SER SEQRES 4 A 77 ILE ASP THR PRO GLY VAL ILE ARG ARG VAL SER GLN LEU SEQRES 5 A 77 PHE HIS GLU HIS PRO ASP LEU ILE VAL GLY PHE ASN ALA SEQRES 6 A 77 PHE LEU PRO LEU GLY TYR ARG ILE ASP ILE PRO LYS SEQRES 1 B 15 ALA PRO GLN LEU ILE MET LEU ALA ASN VAL ALA LEU THR SEQRES 2 B 15 GLY GLU
HELIX 1 1 VAL A 34 ARG A 47 1 14 HELIX 2 2 PRO A 52 LYS A 66 1 15 HELIX 3 3 THR A 72 LEU A 82 1 11 HELIX 4 4 PRO A 87 ASN A 94 1 8 HELIX 5 5 PRO B 44 LEU B 54 1 11
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000