10 20 30 40 50 60 70 80 2CW1 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DE NOVO PROTEIN 15-JUN-05 2CW1
TITLE SOLUTION STRUCTURE OF THE DE NOVO-DESIGNED LAMBDA CRO FOLD TITLE 2 PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: SN4M; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: CHEMICALLY SYNTHESIZED
KEYWDS LAMBDA CRO FOLD, DE NOVO PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 10
AUTHOR Y.ISOGAI,Y.ITO,T.IKEYA,Y.SHIRO,M.OTA
REVDAT 2 24-FEB-09 2CW1 1 VERSN REVDAT 1 13-DEC-05 2CW1 0
JRNL AUTH Y.ISOGAI,Y.ITO,T.IKEYA,Y.SHIRO,M.OTA JRNL TITL DESIGN OF LAMBDA CRO FOLD: SOLUTION STRUCTURE OF A JRNL TITL 2 MONOMERIC VARIANT OF THE DE NOVO PROTEIN. JRNL REF J.MOL.BIOL. V. 354 801 2005 JRNL REFN ISSN 0022-2836 JRNL PMID 16289118 JRNL DOI 10.1016/J.JMB.2005.10.005
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, REMARK 3 RICE,SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CW1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-JUN-05. REMARK 100 THE RCSB ID CODE IS RCSB024687.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 200MM NACL REMARK 210 PRESSURE : 1ATM REMARK 210 SAMPLE CONTENTS : 0.8MM SN4M U-15N,13C; 10MM REMARK 210 SODIUM PHOSPHATE BUFFER (PH REMARK 210 7.0) CONTAINING 200MM NACL; REMARK 210 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 2.6, AZARA 2.7, ANSIG REMARK 210 3.3, CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY.
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 6 90.02 -63.52 REMARK 500 1 LYS A 14 -56.16 -146.17 REMARK 500 1 ASN A 15 -153.04 168.86 REMARK 500 1 PRO A 39 97.22 -65.98 REMARK 500 1 ASN A 45 -71.85 -96.84 REMARK 500 1 LYS A 46 -71.16 -168.85 REMARK 500 1 TYR A 53 84.74 -65.30 REMARK 500 1 PHE A 63 89.88 -17.47 REMARK 500 1 PRO A 64 41.31 -104.82 REMARK 500 2 LYS A 3 68.75 -102.02 REMARK 500 2 ASP A 6 107.35 -55.28 REMARK 500 2 LYS A 14 -55.41 -144.19 REMARK 500 2 ASN A 15 176.23 168.43 REMARK 500 2 GLN A 16 -6.36 -59.72 REMARK 500 2 ASN A 45 -85.89 -96.84 REMARK 500 2 LYS A 46 -65.88 -159.45 REMARK 500 2 GLN A 61 133.41 -178.62 REMARK 500 2 PHE A 63 96.91 -28.33 REMARK 500 2 PRO A 64 42.50 -105.56 REMARK 500 3 ARG A 2 56.05 -94.28 REMARK 500 3 LYS A 3 43.98 -98.53 REMARK 500 3 LYS A 4 81.01 -59.73 REMARK 500 3 LYS A 14 -49.16 -141.68 REMARK 500 3 ASN A 15 170.97 173.45 REMARK 500 3 LEU A 23 -175.31 -68.51 REMARK 500 3 GLU A 32 -70.08 -61.81 REMARK 500 3 ASN A 45 -89.60 -97.77 REMARK 500 3 LYS A 46 -68.86 -148.35 REMARK 500 3 TYR A 53 80.65 -62.88 REMARK 500 4 ARG A 2 43.93 -96.21 REMARK 500 4 LYS A 3 70.45 -100.30 REMARK 500 4 LYS A 14 -56.36 -141.61 REMARK 500 4 ASN A 15 176.91 172.20 REMARK 500 4 LYS A 46 -67.65 73.06 REMARK 500 4 TYR A 53 81.92 -65.66 REMARK 500 4 ASP A 57 -1.86 61.91 REMARK 500 5 ASP A 13 -71.44 -57.84 REMARK 500 5 ASN A 15 -165.76 172.79 REMARK 500 5 LEU A 23 -91.08 -66.00 REMARK 500 5 LEU A 25 160.78 -48.92 REMARK 500 5 LEU A 34 -83.24 -64.28 REMARK 500 5 ASN A 45 -89.32 -115.68 REMARK 500 5 ASP A 47 -4.50 64.70 REMARK 500 5 ASP A 57 -4.28 64.38 REMARK 500 5 PHE A 63 106.33 -44.98 REMARK 500 6 ARG A 2 47.23 -86.77 REMARK 500 6 LYS A 14 57.89 -167.84 REMARK 500 6 ASN A 15 159.15 74.68 REMARK 500 6 ASN A 45 -82.92 -113.21 REMARK 500 6 ASP A 47 -34.01 75.10 REMARK 500 6 TYR A 53 82.45 -56.76 REMARK 500 6 ASP A 57 -7.21 70.64 REMARK 500 6 PHE A 63 83.88 2.61 REMARK 500 6 PRO A 64 45.14 -103.05 REMARK 500 7 LYS A 14 -53.74 -151.90 REMARK 500 7 ASN A 15 -175.17 165.91 REMARK 500 7 LEU A 23 -87.51 -50.75 REMARK 500 7 ASN A 45 -93.34 -97.44 REMARK 500 7 LYS A 46 -69.36 -145.77 REMARK 500 7 TYR A 53 76.56 -69.65 REMARK 500 7 ASP A 57 -0.46 62.07 REMARK 500 8 ASP A 6 99.90 -53.95 REMARK 500 8 LEU A 7 -37.90 -35.54 REMARK 500 8 LYS A 14 -51.39 -163.77 REMARK 500 8 ASN A 15 166.76 162.97 REMARK 500 8 GLN A 16 -17.62 -47.79 REMARK 500 8 LEU A 23 -86.82 -54.27 REMARK 500 8 ASN A 45 -74.87 -94.59 REMARK 500 8 LYS A 46 -64.70 -168.62 REMARK 500 8 TYR A 53 87.62 -55.17 REMARK 500 8 ASP A 57 -13.88 72.04 REMARK 500 8 PHE A 63 83.20 -5.32 REMARK 500 8 PRO A 64 45.49 -105.74 REMARK 500 9 ARG A 2 47.87 -164.79 REMARK 500 9 LYS A 14 -49.18 -146.82 REMARK 500 9 ASN A 15 166.21 173.84 REMARK 500 9 ASN A 45 -80.80 -85.93 REMARK 500 9 LYS A 46 -38.51 -173.22 REMARK 500 9 ASP A 57 12.80 52.27 REMARK 500 9 PHE A 63 107.75 -41.88 REMARK 500 10 ASP A 6 95.55 -67.15 REMARK 500 10 LYS A 14 -55.12 -144.29 REMARK 500 10 ASN A 15 -167.08 170.06 REMARK 500 10 LEU A 23 -92.68 -72.46 REMARK 500 10 LEU A 25 160.32 -47.86 REMARK 500 10 SER A 26 -176.95 -66.38 REMARK 500 10 ASN A 45 -87.37 -91.19 REMARK 500 10 LYS A 46 -72.56 -142.85 REMARK 500 REMARK 500 REMARK: NULL
DBREF 2CW1 A 1 65 PDB 2CW1 2CW1 1 65
SEQRES 1 A 65 MET ARG LYS LYS LEU ASP LEU LYS LYS PHE VAL GLU ASP SEQRES 2 A 65 LYS ASN GLN GLU TYR ALA ALA ARG ALA LEU GLY LEU SER SEQRES 3 A 65 GLN LYS LEU ILE GLU GLU VAL LEU LYS ARG GLY LEU PRO SEQRES 4 A 65 VAL TYR VAL GLU THR ASN LYS ASP GLY ASN ILE LYS VAL SEQRES 5 A 65 TYR ILE THR GLN ASP GLY ILE THR GLN PRO PHE PRO PRO
HELIX 1 1 ASP A 6 GLU A 12 1 7 HELIX 2 2 ASN A 15 LEU A 23 1 9 HELIX 3 3 SER A 26 ARG A 36 1 11
SHEET 1 A 2 GLU A 43 THR A 44 0 SHEET 2 A 2 ILE A 50 LYS A 51 -1 O LYS A 51 N GLU A 43 SHEET 1 B 2 TYR A 53 GLN A 56 0 SHEET 2 B 2 ILE A 59 PRO A 62 -1 O GLN A 61 N ILE A 54
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000