10 20 30 40 50 60 70 80 2CSF - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric Unit
HEADER TRANSCRIPTION 21-MAY-05 2CSF
TITLE SOLUTION STRUCTURE OF THE SECOND CUT DOMAIN OF HUMAN SATB2
COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING PROTEIN SATB2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CUT DOMAIN; COMPND 5 SYNONYM: SPECIAL AT-RICH SEQUENCE-BINDING PROTEIN 2; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAZUSA CDNA FH00753; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040705-12; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS CUT DOMAIN, DNA-BINDING PROTEIN SATB2, SPECIAL AT-RICH KEYWDS 2 SEQUENCE-BINDING PROTEIN 2, STRUCTURAL GENOMICS, NPPSFA, KEYWDS 3 NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL KEYWDS 4 ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, KEYWDS 5 RSGI, TRANSCRIPTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR K.INOUE,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2CSF 1 VERSN REVDAT 1 21-NOV-05 2CSF 0
JRNL AUTH K.INOUE,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE SECOND CUT DOMAIN OF JRNL TITL 2 HUMAN SATB2 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CSF COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024571.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.23MM U-15N, 13C-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL; REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.9296, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 9 109.88 -53.51 REMARK 500 1 LYS A 10 151.29 -44.10 REMARK 500 1 ALA A 44 -64.93 -90.94 REMARK 500 1 SER A 99 108.41 -50.56 REMARK 500 1 SER A 100 138.63 -170.59 REMARK 500 2 SER A 6 122.52 -171.70 REMARK 500 2 ALA A 44 -61.00 -102.27 REMARK 500 2 SER A 100 176.41 -52.48 REMARK 500 3 SER A 3 116.51 -39.60 REMARK 500 3 ILE A 22 -38.21 -39.54 REMARK 500 3 GLU A 94 -70.28 -62.64 REMARK 500 4 ASP A 12 124.18 -172.29 REMARK 500 4 ALA A 14 82.35 -67.05 REMARK 500 4 LYS A 34 44.39 70.68 REMARK 500 4 ALA A 44 -64.95 -91.58 REMARK 500 4 GLU A 60 173.01 -50.46 REMARK 500 4 PRO A 64 1.02 -69.80 REMARK 500 4 GLU A 94 -70.31 -70.82 REMARK 500 4 PRO A 98 -174.41 -69.72 REMARK 500 5 ILE A 16 131.17 -34.35 REMARK 500 5 ILE A 22 -38.27 -39.48 REMARK 500 5 SER A 99 149.50 -175.01 REMARK 500 6 SER A 3 95.51 -52.64 REMARK 500 6 ALA A 14 159.56 -46.31 REMARK 500 6 LYS A 34 49.18 70.59 REMARK 500 6 ALA A 44 -63.37 -97.94 REMARK 500 6 PRO A 64 0.27 -69.81 REMARK 500 7 VAL A 11 125.98 -172.02 REMARK 500 7 ILE A 22 -38.80 -39.45 REMARK 500 7 LYS A 34 46.19 70.97 REMARK 500 7 ALA A 44 -60.93 -94.78 REMARK 500 8 ILE A 16 127.67 -34.30 REMARK 500 8 ALA A 44 -60.61 -102.54 REMARK 500 8 GLU A 60 170.38 -44.77 REMARK 500 8 PRO A 64 0.22 -69.80 REMARK 500 8 GLU A 94 -71.02 -62.81 REMARK 500 8 SER A 96 42.02 -86.74 REMARK 500 8 SER A 99 155.32 -47.31 REMARK 500 9 ILE A 9 87.53 -68.94 REMARK 500 9 LYS A 34 51.91 70.26 REMARK 500 9 GLN A 37 -33.11 -39.99 REMARK 500 9 ALA A 44 -63.62 -92.60 REMARK 500 9 GLU A 60 -174.68 -51.58 REMARK 500 9 PRO A 64 0.28 -69.73 REMARK 500 9 ARG A 67 -70.17 -70.73 REMARK 500 10 ILE A 16 128.47 -37.27 REMARK 500 10 PRO A 64 0.18 -69.74 REMARK 500 10 GLU A 94 -70.66 -66.58 REMARK 500 11 SER A 3 111.51 -36.77 REMARK 500 11 SER A 5 92.13 -69.43 REMARK 500 11 LYS A 10 112.51 -168.34 REMARK 500 11 ALA A 44 -63.94 -95.73 REMARK 500 11 SER A 96 43.44 -106.22 REMARK 500 12 VAL A 11 141.90 -172.33 REMARK 500 12 ASP A 12 149.83 -174.40 REMARK 500 12 ALA A 14 -60.57 -92.30 REMARK 500 12 GLN A 37 -36.13 -39.48 REMARK 500 12 ALA A 44 -63.00 -99.80 REMARK 500 13 SER A 6 43.50 -87.60 REMARK 500 13 ILE A 9 89.74 -64.62 REMARK 500 13 ALA A 44 -60.20 -96.07 REMARK 500 13 GLU A 60 -175.68 -51.20 REMARK 500 13 PRO A 64 0.36 -69.71 REMARK 500 13 LEU A 69 -67.06 -90.17 REMARK 500 13 GLU A 71 -70.18 -48.53 REMARK 500 13 GLU A 94 -72.36 -61.76 REMARK 500 14 ALA A 14 40.78 -101.59 REMARK 500 14 ALA A 44 -61.72 -100.80 REMARK 500 14 SER A 99 171.62 -55.42 REMARK 500 15 ALA A 44 -63.20 -93.97 REMARK 500 15 GLU A 60 170.65 -50.82 REMARK 500 15 PRO A 64 0.45 -69.81 REMARK 500 16 SER A 2 42.02 -92.92 REMARK 500 16 SER A 6 154.51 -43.09 REMARK 500 16 ALA A 14 42.13 -85.55 REMARK 500 16 ALA A 44 -60.47 -99.75 REMARK 500 16 GLU A 60 -176.45 -50.87 REMARK 500 16 PRO A 64 0.43 -69.84 REMARK 500 16 LEU A 69 -67.13 -90.21 REMARK 500 16 PRO A 98 -177.13 -69.82 REMARK 500 17 LYS A 34 40.21 71.82 REMARK 500 17 ALA A 44 -61.64 -100.35 REMARK 500 17 GLU A 60 -178.57 -50.52 REMARK 500 17 PRO A 64 0.10 -69.79 REMARK 500 17 GLU A 71 -70.02 -49.21 REMARK 500 18 SER A 6 98.07 -57.96 REMARK 500 18 ILE A 9 53.34 28.11 REMARK 500 18 ILE A 22 -38.77 -39.20 REMARK 500 18 LYS A 34 42.28 71.94 REMARK 500 18 ALA A 44 -63.51 -92.98 REMARK 500 18 GLU A 60 175.06 -51.13 REMARK 500 18 SER A 99 90.02 -63.72 REMARK 500 19 ASP A 12 113.03 -170.76 REMARK 500 19 ILE A 22 -39.05 -39.38 REMARK 500 19 PRO A 64 0.05 -69.81 REMARK 500 19 GLU A 94 -71.10 -61.01 REMARK 500 20 ALA A 14 143.76 -172.72 REMARK 500 20 ASN A 15 141.56 -35.70 REMARK 500 20 ALA A 44 -62.27 -95.11 REMARK 500 20 GLU A 60 171.49 -51.67 REMARK 500 20 SER A 99 -43.69 -130.86 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001010.3 RELATED DB: TARGETDB
DBREF 2CSF A 8 95 UNP Q9UPW6 SATB2_HUMAN 473 560
SEQADV 2CSF GLY A 1 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF SER A 2 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF SER A 3 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF GLY A 4 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF SER A 5 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF SER A 6 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF GLY A 7 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF SER A 96 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF GLY A 97 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF PRO A 98 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF SER A 99 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF SER A 100 UNP Q9UPW6 CLONING ARTIFACT SEQADV 2CSF GLY A 101 UNP Q9UPW6 CLONING ARTIFACT
SEQRES 1 A 101 GLY SER SER GLY SER SER GLY PRO ILE LYS VAL ASP GLY SEQRES 2 A 101 ALA ASN ILE ASN ILE THR ALA ALA ILE TYR ASP GLU ILE SEQRES 3 A 101 GLN GLN GLU MET LYS ARG ALA LYS VAL SER GLN ALA LEU SEQRES 4 A 101 PHE ALA LYS VAL ALA ALA ASN LYS SER GLN GLY TRP LEU SEQRES 5 A 101 CYS GLU LEU LEU ARG TRP LYS GLU ASN PRO SER PRO GLU SEQRES 6 A 101 ASN ARG THR LEU TRP GLU ASN LEU CYS THR ILE ARG ARG SEQRES 7 A 101 PHE LEU ASN LEU PRO GLN HIS GLU ARG ASP VAL ILE TYR SEQRES 8 A 101 GLU GLU GLU SER SER GLY PRO SER SER GLY
HELIX 1 1 ALA A 20 LYS A 34 1 15 HELIX 2 2 SER A 36 ALA A 44 1 9 HELIX 3 3 SER A 48 LYS A 59 1 12 HELIX 4 4 ASN A 66 ASN A 81 1 16 HELIX 5 5 PRO A 83 SER A 95 1 13
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000