10 20 30 40 50 60 70 80 2CS1 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER DNA BINDING PROTEIN 20-MAY-05 2CS1
TITLE SOLUTION STRUCTURE OF THE HMG DOMAIN OF HUMAN DNA MISMATCH TITLE 2 REPAIR PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: PMS1 PROTEIN HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HMG_BOX DOMAIN; COMPND 5 SYNONYM: DNA MISMATCH REPAIR PROTEIN PMS1; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PMS1, PMSL1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050111-24; SOURCE 8 OTHER_DETAILS: CELL FREE PROTEIN SYNTHESIS
KEYWDS DNA MISMATCH REPAIR PROTEIN PMS1, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, DNA BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2CS1 1 VERSN REVDAT 1 20-NOV-05 2CS1 0
JRNL AUTH C.KUROSAKI,F.HAYASHI,M.YOSHIDA,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE HMG DOMAIN OF HUMAN DNA JRNL TITL 2 MISMATCH REPAIR PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CS1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024558.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.08MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL; REMARK 210 100MM NACL; 1MM D-DTT; 0.02% REMARK 210 NAN3; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : ECA REMARK 210 SPECTROMETER MANUFACTURER : JEOL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : DELTA NMR 4.3, NMRPIPE REMARK 210 20031121, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9298, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 8 102.98 -55.70 REMARK 500 1 PHE A 18 -38.45 -36.72 REMARK 500 1 LEU A 40 -34.09 -37.72 REMARK 500 1 GLN A 78 48.96 -75.80 REMARK 500 2 PRO A 31 2.74 -69.70 REMARK 500 2 LEU A 49 176.93 -48.02 REMARK 500 2 GLN A 81 -62.58 -130.82 REMARK 500 3 SER A 6 74.98 -116.41 REMARK 500 3 PRO A 11 -164.58 -69.78 REMARK 500 3 ASN A 30 79.64 -117.17 REMARK 500 3 LYS A 32 40.86 -92.42 REMARK 500 3 LYS A 73 -74.28 -40.98 REMARK 500 3 GLN A 78 49.39 -76.79 REMARK 500 3 GLU A 79 -61.38 -107.97 REMARK 500 3 SER A 80 157.86 -46.64 REMARK 500 3 PRO A 89 -176.45 -69.78 REMARK 500 4 SER A 6 -66.28 -100.95 REMARK 500 4 ILE A 8 97.98 -48.44 REMARK 500 4 LYS A 32 42.20 -81.79 REMARK 500 4 GLU A 36 -70.44 -55.41 REMARK 500 4 LEU A 40 -37.65 -34.36 REMARK 500 4 LEU A 49 -178.17 -68.69 REMARK 500 4 LYS A 56 -34.58 -37.41 REMARK 500 4 GLU A 77 50.68 -95.56 REMARK 500 4 GLN A 78 29.38 43.87 REMARK 500 4 MET A 82 100.18 -48.25 REMARK 500 4 SER A 87 -64.36 -94.24 REMARK 500 5 SER A 5 110.37 -37.53 REMARK 500 5 ALA A 14 -29.65 -38.84 REMARK 500 5 PRO A 31 1.64 -69.75 REMARK 500 5 LEU A 40 -35.15 -36.34 REMARK 500 5 LEU A 65 -33.49 -35.77 REMARK 500 5 ILE A 76 -38.19 -34.69 REMARK 500 5 GLU A 77 -179.71 -63.63 REMARK 500 5 ASP A 86 102.01 -53.20 REMARK 500 5 SER A 87 148.26 -173.92 REMARK 500 6 SER A 3 55.77 -91.46 REMARK 500 6 SER A 13 178.44 -52.87 REMARK 500 6 LEU A 40 -33.85 -34.85 REMARK 500 6 LEU A 49 -176.90 -59.99 REMARK 500 6 GLN A 78 48.46 -77.46 REMARK 500 6 MET A 82 123.67 -39.30 REMARK 500 7 SER A 2 177.47 -53.55 REMARK 500 7 SER A 3 51.10 37.23 REMARK 500 7 ILE A 8 101.66 -37.11 REMARK 500 7 GLU A 58 -27.32 -39.83 REMARK 500 7 GLN A 78 -33.71 -37.47 REMARK 500 7 SER A 80 143.44 -39.75 REMARK 500 7 SER A 83 48.87 -95.38 REMARK 500 7 LYS A 85 127.86 -34.72 REMARK 500 8 PRO A 11 -169.46 -69.75 REMARK 500 8 LEU A 40 -37.76 -36.66 REMARK 500 8 LEU A 49 169.29 -46.44 REMARK 500 8 LEU A 55 -35.58 -38.89 REMARK 500 8 LYS A 73 -72.79 -50.19 REMARK 500 9 PRO A 11 -165.60 -69.76 REMARK 500 9 ALA A 14 -34.49 -38.54 REMARK 500 9 GLN A 25 -35.52 -39.30 REMARK 500 9 PRO A 31 2.91 -69.76 REMARK 500 9 LEU A 49 171.22 -51.64 REMARK 500 9 GLU A 51 -72.62 -49.09 REMARK 500 9 GLU A 77 35.25 -89.52 REMARK 500 9 GLN A 78 25.88 47.03 REMARK 500 9 MET A 82 48.93 -81.58 REMARK 500 9 LYS A 85 -176.43 -60.36 REMARK 500 9 PRO A 89 -172.90 -69.71 REMARK 500 9 SER A 91 177.01 -56.99 REMARK 500 10 ALA A 16 -60.36 -92.01 REMARK 500 10 LEU A 35 -74.96 -56.69 REMARK 500 10 LEU A 40 -31.30 -39.12 REMARK 500 10 GLU A 51 -70.54 -48.84 REMARK 500 10 MET A 72 -27.76 -37.82 REMARK 500 10 ILE A 76 -31.59 -35.29 REMARK 500 10 GLN A 78 38.64 36.36 REMARK 500 10 PRO A 89 -170.38 -69.81 REMARK 500 11 ASN A 30 79.92 -116.51 REMARK 500 11 LEU A 35 -71.20 -61.18 REMARK 500 11 LYS A 85 -61.75 -103.04 REMARK 500 12 SER A 3 42.20 39.32 REMARK 500 12 ILE A 8 100.67 -53.94 REMARK 500 12 LEU A 49 -177.36 -62.35 REMARK 500 12 GLU A 77 53.91 -90.33 REMARK 500 12 GLN A 78 29.79 36.86 REMARK 500 12 SER A 87 -58.84 -130.62 REMARK 500 12 SER A 91 41.58 34.45 REMARK 500 13 ALA A 38 -32.64 -37.57 REMARK 500 13 GLU A 66 -32.28 -39.11 REMARK 500 13 MET A 72 -33.34 -34.48 REMARK 500 13 LYS A 85 117.16 -174.69 REMARK 500 13 SER A 90 167.50 -49.76 REMARK 500 14 PHE A 18 -39.53 -36.21 REMARK 500 14 SER A 34 -175.35 -64.28 REMARK 500 14 LEU A 49 -179.33 -58.60 REMARK 500 14 GLU A 77 51.15 -97.24 REMARK 500 14 GLN A 78 37.90 34.50 REMARK 500 14 GLN A 81 156.40 -40.75 REMARK 500 15 PRO A 11 -173.56 -69.78 REMARK 500 15 PRO A 31 2.77 -69.77 REMARK 500 15 MET A 72 -35.61 -34.28 REMARK 500 15 LYS A 73 -75.07 -42.07 REMARK 500 15 GLN A 78 25.76 49.28 REMARK 500 16 ILE A 8 154.29 -39.76 REMARK 500 16 THR A 33 105.67 -56.74 REMARK 500 16 SER A 34 152.38 -38.15 REMARK 500 16 LEU A 49 162.80 -44.77 REMARK 500 16 GLU A 52 -38.76 -35.17 REMARK 500 16 ILE A 76 -33.43 -39.37 REMARK 500 16 GLU A 77 49.15 -85.93 REMARK 500 16 GLN A 78 43.33 34.47 REMARK 500 17 ALA A 14 -30.13 -39.39 REMARK 500 17 ILE A 28 -36.26 -34.09 REMARK 500 17 LYS A 32 -19.51 -49.95 REMARK 500 17 LEU A 35 -71.50 -49.33 REMARK 500 17 LEU A 65 -29.76 -37.44 REMARK 500 17 LYS A 73 -32.10 -38.58 REMARK 500 17 GLU A 77 177.46 -58.25 REMARK 500 17 GLN A 78 -26.43 -39.15 REMARK 500 17 PRO A 89 1.96 -69.80 REMARK 500 18 PRO A 11 -171.89 -69.78 REMARK 500 18 LEU A 40 -31.19 -37.98 REMARK 500 18 LEU A 49 -179.26 -68.01 REMARK 500 18 GLU A 66 -33.53 -39.52 REMARK 500 18 ARG A 67 -75.33 -62.51 REMARK 500 18 MET A 72 -36.06 -35.69 REMARK 500 18 GLU A 77 34.18 -96.13 REMARK 500 18 GLN A 81 46.44 -90.97 REMARK 500 18 SER A 90 42.51 72.23 REMARK 500 19 ILE A 8 103.89 -48.29 REMARK 500 19 PRO A 11 -164.72 -69.74 REMARK 500 19 ASN A 30 75.62 -115.72 REMARK 500 19 GLU A 51 -71.96 -45.92 REMARK 500 19 ILE A 76 -29.76 -39.19 REMARK 500 19 SER A 80 156.49 -39.40 REMARK 500 19 GLN A 81 -176.54 -57.93 REMARK 500 20 LEU A 40 -38.90 -34.47 REMARK 500 20 LEU A 49 169.37 -44.94 REMARK 500 20 GLU A 51 -70.65 -69.39 REMARK 500 20 MET A 72 -31.60 -35.43 REMARK 500 20 LYS A 73 -70.19 -36.22 REMARK 500 20 ILE A 76 -32.04 -39.63 REMARK 500 20 GLU A 77 42.91 -82.25 REMARK 500 20 GLN A 78 43.39 35.40 REMARK 500 20 PRO A 89 -172.33 -69.74 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO002000379.1 RELATED DB: TARGETDB
DBREF 2CS1 A 8 86 UNP P54277 PMS1_HUMAN 571 649
SEQADV 2CS1 GLY A 1 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 SER A 2 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 SER A 3 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 GLY A 4 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 SER A 5 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 SER A 6 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 GLY A 7 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 SER A 87 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 GLY A 88 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 PRO A 89 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 SER A 90 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 SER A 91 UNP P54277 CLONING ARTIFACT SEQADV 2CS1 GLY A 92 UNP P54277 CLONING ARTIFACT
SEQRES 1 A 92 GLY SER SER GLY SER SER GLY ILE LYS LYS PRO MET SER SEQRES 2 A 92 ALA SER ALA LEU PHE VAL GLN ASP HIS ARG PRO GLN PHE SEQRES 3 A 92 LEU ILE GLU ASN PRO LYS THR SER LEU GLU ASP ALA THR SEQRES 4 A 92 LEU GLN ILE GLU GLU LEU TRP LYS THR LEU SER GLU GLU SEQRES 5 A 92 GLU LYS LEU LYS TYR GLU GLU LYS ALA THR LYS ASP LEU SEQRES 6 A 92 GLU ARG TYR ASN SER GLN MET LYS ARG ALA ILE GLU GLN SEQRES 7 A 92 GLU SER GLN MET SER LEU LYS ASP SER GLY PRO SER SER SEQRES 8 A 92 GLY
HELIX 1 1 SER A 13 ASN A 30 1 18 HELIX 2 2 SER A 34 THR A 48 1 15 HELIX 3 3 SER A 50 LYS A 63 1 14 HELIX 4 4 LEU A 65 ILE A 76 1 12
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000