10 20 30 40 50 60 70 80 2CRL - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER CHAPERONE 20-MAY-05 2CRL
TITLE THE APO FORM OF HMA DOMAIN OF COPPER CHAPERONE FOR TITLE 2 SUPEROXIDE DISMUTASE
COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HMA DOMAIN; COMPND 5 SYNONYM: SUPEROXIDE DISMUTASE COPPER CHAPERONE; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CCS; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P050111-23; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS SOD1, FAMILIAL ALS, STRUCTURAL GENOMICS, NPPSFA, NATIONAL KEYWDS 2 PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, KEYWDS 3 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, KEYWDS 4 CHAPERONE
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 2 24-FEB-09 2CRL 1 VERSN REVDAT 1 20-NOV-05 2CRL 0
JRNL AUTH T.NAGASHIMA,F.HAYASHI,S.YOKOYAMA JRNL TITL THE APO FORM OF HMA DOMAIN OF COPPER CHAPERONE FOR JRNL TITL 2 SUPEROXIDE DISMUTASE JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CRL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024546.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.40MM HMA DOMAIN U-13C,15N; REMARK 210 20MM TRISHCL, 100MM NACL, 1MM REMARK 210 DTT, 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20020425, REMARK 210 NMRVIEW 5.0.4, KUJIRA 0.901, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 28 -59.35 -129.56 REMARK 500 1 ALA A 44 124.83 -34.31 REMARK 500 1 GLN A 56 36.63 38.98 REMARK 500 2 SER A 2 139.53 -170.31 REMARK 500 2 SER A 5 89.35 -66.31 REMARK 500 2 THR A 17 99.48 -45.00 REMARK 500 2 ALA A 44 117.02 -34.88 REMARK 500 2 GLN A 56 39.40 37.72 REMARK 500 3 SER A 2 41.90 39.12 REMARK 500 3 MET A 8 146.54 -174.89 REMARK 500 3 GLN A 15 40.00 -82.75 REMARK 500 3 THR A 28 -39.66 -132.23 REMARK 500 3 ALA A 44 109.17 -34.75 REMARK 500 3 SER A 66 -32.09 -39.96 REMARK 500 3 MET A 85 104.08 -34.34 REMARK 500 3 PRO A 95 -179.82 -69.74 REMARK 500 4 ALA A 9 107.48 -35.72 REMARK 500 4 ALA A 44 135.37 -38.66 REMARK 500 4 GLN A 56 38.10 35.77 REMARK 500 4 SER A 66 -30.87 -35.94 REMARK 500 4 PRO A 95 2.29 -69.82 REMARK 500 4 SER A 97 94.51 -57.10 REMARK 500 5 ASN A 14 40.64 -90.60 REMARK 500 5 ALA A 44 117.38 -33.93 REMARK 500 5 GLN A 56 35.80 34.80 REMARK 500 5 LEU A 90 148.66 -34.67 REMARK 500 5 SER A 97 -56.87 -123.59 REMARK 500 6 MET A 8 103.64 -51.05 REMARK 500 6 THR A 28 -62.53 -122.85 REMARK 500 6 VAL A 36 -38.42 -39.70 REMARK 500 6 ALA A 44 145.47 -37.47 REMARK 500 6 GLN A 56 43.95 34.38 REMARK 500 6 GLN A 91 125.90 -171.21 REMARK 500 7 ASN A 14 -54.22 -120.56 REMARK 500 7 GLN A 15 37.51 39.77 REMARK 500 7 ALA A 44 141.09 -37.67 REMARK 500 7 GLN A 56 38.85 39.70 REMARK 500 7 MET A 85 31.13 35.66 REMARK 500 8 GLN A 15 43.59 -108.97 REMARK 500 8 THR A 28 -57.33 -124.60 REMARK 500 8 SER A 97 42.89 37.10 REMARK 500 9 SER A 3 -51.15 -132.64 REMARK 500 9 SER A 6 117.29 -164.73 REMARK 500 9 MET A 8 113.07 -161.71 REMARK 500 9 ASN A 14 42.15 -103.28 REMARK 500 9 SER A 31 -70.03 -34.43 REMARK 500 9 ALA A 44 108.58 -42.33 REMARK 500 9 GLN A 56 44.94 37.12 REMARK 500 9 PRO A 95 -178.36 -69.76 REMARK 500 10 SER A 31 -70.29 -32.71 REMARK 500 10 ALA A 44 124.62 -34.52 REMARK 500 10 GLN A 56 42.85 38.82 REMARK 500 10 GLN A 91 45.82 -80.31 REMARK 500 11 SER A 5 133.66 -172.81 REMARK 500 11 GLN A 41 106.53 -53.84 REMARK 500 11 ALA A 44 139.42 -34.91 REMARK 500 11 GLN A 89 119.66 -160.77 REMARK 500 12 ALA A 9 123.80 -173.34 REMARK 500 12 SER A 31 -70.03 -34.21 REMARK 500 12 CYS A 32 -38.52 -36.33 REMARK 500 12 ALA A 44 137.47 -36.35 REMARK 500 12 GLN A 56 38.79 36.21 REMARK 500 13 LEU A 90 41.41 -101.33 REMARK 500 14 THR A 28 -40.71 -130.10 REMARK 500 14 MET A 85 101.66 -49.95 REMARK 500 14 SER A 96 104.20 -45.89 REMARK 500 15 MET A 8 46.46 33.32 REMARK 500 15 ASP A 11 40.70 -87.85 REMARK 500 15 GLN A 15 -37.59 -35.66 REMARK 500 15 ALA A 44 130.66 -33.96 REMARK 500 15 GLN A 56 44.14 38.98 REMARK 500 15 ASN A 92 148.56 -174.49 REMARK 500 15 PRO A 95 99.52 -69.73 REMARK 500 16 GLN A 15 132.68 -171.46 REMARK 500 16 THR A 28 -39.45 -133.40 REMARK 500 16 GLN A 56 46.81 39.07 REMARK 500 16 GLN A 67 -34.79 -34.60 REMARK 500 17 SER A 12 38.70 35.84 REMARK 500 17 THR A 28 -60.56 -107.81 REMARK 500 17 ALA A 44 141.80 -36.35 REMARK 500 17 GLN A 56 45.44 34.45 REMARK 500 18 ALA A 44 138.99 -35.89 REMARK 500 18 GLN A 56 44.48 37.26 REMARK 500 18 MET A 85 77.49 -69.99 REMARK 500 18 SER A 96 101.94 -35.72 REMARK 500 19 THR A 28 -53.86 -128.78 REMARK 500 19 ALA A 44 124.72 -39.09 REMARK 500 19 GLN A 56 37.19 36.71 REMARK 500 19 SER A 66 -39.14 -36.60 REMARK 500 19 PRO A 95 -177.58 -69.72 REMARK 500 20 MET A 8 151.43 -35.81 REMARK 500 20 SER A 10 125.49 -173.84 REMARK 500 20 ASP A 11 44.73 36.93 REMARK 500 20 THR A 28 -53.02 -131.32 REMARK 500 20 ALA A 44 134.22 -35.28 REMARK 500 20 SER A 66 -33.99 -34.31 REMARK 500 20 MET A 85 -74.17 -42.82 REMARK 500 20 SER A 87 134.67 -171.13 REMARK 500 20 GLN A 89 83.08 -67.66 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSO002000359.1 RELATED DB: TARGETDB
DBREF 2CRL A 8 92 UNP O14618 CCS_HUMAN 1 85
SEQADV 2CRL GLY A 1 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 2 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 3 UNP O14618 CLONING ARTIFACT SEQADV 2CRL GLY A 4 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 5 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 6 UNP O14618 CLONING ARTIFACT SEQADV 2CRL GLY A 7 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 93 UNP O14618 CLONING ARTIFACT SEQADV 2CRL GLY A 94 UNP O14618 CLONING ARTIFACT SEQADV 2CRL PRO A 95 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 96 UNP O14618 CLONING ARTIFACT SEQADV 2CRL SER A 97 UNP O14618 CLONING ARTIFACT SEQADV 2CRL GLY A 98 UNP O14618 CLONING ARTIFACT
SEQRES 1 A 98 GLY SER SER GLY SER SER GLY MET ALA SER ASP SER GLY SEQRES 2 A 98 ASN GLN GLY THR LEU CYS THR LEU GLU PHE ALA VAL GLN SEQRES 3 A 98 MET THR CYS GLN SER CYS VAL ASP ALA VAL ARG LYS SER SEQRES 4 A 98 LEU GLN GLY VAL ALA GLY VAL GLN ASP VAL GLU VAL HIS SEQRES 5 A 98 LEU GLU ASP GLN MET VAL LEU VAL HIS THR THR LEU PRO SEQRES 6 A 98 SER GLN GLU VAL GLN ALA LEU LEU GLU GLY THR GLY ARG SEQRES 7 A 98 GLN ALA VAL LEU LYS GLY MET GLY SER GLY GLN LEU GLN SEQRES 8 A 98 ASN SER GLY PRO SER SER GLY
HELIX 1 1 CYS A 29 SER A 39 1 11 HELIX 2 2 PRO A 65 GLY A 75 1 11
SHEET 1 A 4 ASP A 48 HIS A 52 0 SHEET 2 A 4 MET A 57 THR A 62 -1 O HIS A 61 N ASP A 48 SHEET 3 A 4 CYS A 19 VAL A 25 -1 N PHE A 23 O VAL A 58 SHEET 4 A 4 ALA A 80 GLY A 84 -1 O VAL A 81 N ALA A 24
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000