10 20 30 40 50 60 70 80 2CR5 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 20-MAY-05 2CR5
TITLE SOLUTION STRUCTURE OF THE UBX DOMAIN OF D0H8S2298E PROTEIN
COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPRODUCTION 8; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBX DOMAIN; COMPND 5 SYNONYM: REPRODUCTION 8, D0H8S2298E PROTEIN; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: D0H8S2298E, REP-8; SOURCE 6 EXPRESSION_SYSTEM: CELL FREE PROTEIN SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P050111-21
KEYWDS UBX DOMAIN, REPRODUCTION 8, D0H8S2298E PROTEIN, STRUCTURAL KEYWDS 2 GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL KEYWDS 3 AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL KEYWDS 4 GENOMICS/PROTEOMICS INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR H.P.ZHANG,F.HAYASHI,S.YOKOYAMA,RIKEN STRUCTURAL AUTHOR 2 GENOMICS/PROTEOMICS INITIATIVE (RSGI)
REVDAT 3 18-AUG-09 2CR5 1 JRNL TITLE REVDAT 2 24-FEB-09 2CR5 1 VERSN REVDAT 1 20-NOV-05 2CR5 0
JRNL AUTH H.P.ZHANG,F.HAYASHI,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE UBX DOMAIN OF D0H8S2298E JRNL TITL 2 PROTEIN JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT,P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CR5 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024532.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.87MM 13C, 15N-LABELED REMARK 210 PROTEIN; 20MM D-TRIS-HCL REMARK 210 (PH7.0); 100MM NACL; 1MM D- REMARK 210 DTT; 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : VNMR 6.1C, NMRPIPE 20031121, REMARK 210 NMRVIEW 5.04, KUJIRA 0.9296, REMARK 210 CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: SPECTROMETER_ID 1 FOR 3D_15N_SEPARATED_NOESY; REMARK 210 SPECTROMETER_ID 2 FOR 3D_13C_SEPARATED_NOESY
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 14 120.57 -34.55 REMARK 500 1 SER A 46 -35.02 -35.23 REMARK 500 1 VAL A 76 153.75 -36.77 REMARK 500 1 SER A 102 41.01 -102.14 REMARK 500 2 SER A 6 97.97 -63.53 REMARK 500 2 PRO A 31 0.76 -69.66 REMARK 500 2 SER A 46 -32.64 -34.75 REMARK 500 2 SER A 68 163.11 -41.43 REMARK 500 2 PHE A 69 123.52 -36.49 REMARK 500 2 SER A 81 -179.57 -66.00 REMARK 500 2 ASP A 90 126.59 -34.61 REMARK 500 2 SER A 101 -69.39 -106.21 REMARK 500 3 SER A 3 155.29 -44.55 REMARK 500 3 PRO A 10 -172.32 -69.78 REMARK 500 3 PRO A 13 -175.24 -69.83 REMARK 500 3 PRO A 31 0.53 -69.84 REMARK 500 3 SER A 46 -33.25 -34.82 REMARK 500 3 ASP A 90 127.00 -36.87 REMARK 500 3 PRO A 106 89.34 -69.69 REMARK 500 4 SER A 46 -34.71 -33.51 REMARK 500 4 VAL A 48 -36.11 -36.64 REMARK 500 4 LEU A 62 -62.31 -91.14 REMARK 500 4 PHE A 69 119.25 -34.33 REMARK 500 4 ASP A 90 106.02 -35.04 REMARK 500 4 GLU A 97 150.12 -37.52 REMARK 500 4 GLN A 100 83.19 -68.89 REMARK 500 4 PRO A 106 1.48 -69.75 REMARK 500 4 SER A 108 128.79 -170.08 REMARK 500 5 SER A 6 83.43 -65.97 REMARK 500 5 GLU A 8 98.96 -65.53 REMARK 500 5 SER A 46 -34.30 -33.82 REMARK 500 5 VAL A 48 -33.98 -38.71 REMARK 500 5 TYR A 58 116.67 -161.54 REMARK 500 5 PHE A 69 123.61 -37.31 REMARK 500 5 ASP A 90 129.14 -35.97 REMARK 500 5 SER A 108 43.92 36.68 REMARK 500 6 PHE A 41 174.01 -59.34 REMARK 500 6 SER A 46 -34.33 -34.11 REMARK 500 6 PRO A 70 -169.81 -69.69 REMARK 500 6 VAL A 76 130.24 -38.49 REMARK 500 6 ASP A 90 108.99 -36.45 REMARK 500 6 PRO A 106 95.75 -69.77 REMARK 500 6 SER A 107 52.21 -90.71 REMARK 500 6 SER A 108 50.96 34.87 REMARK 500 7 GLU A 14 107.11 -42.88 REMARK 500 7 GLU A 15 143.05 -35.78 REMARK 500 7 SER A 17 177.79 -54.91 REMARK 500 7 ALA A 20 127.59 -36.20 REMARK 500 7 ASN A 32 31.42 -98.66 REMARK 500 7 SER A 46 -37.33 -31.50 REMARK 500 7 GLU A 97 150.64 -34.13 REMARK 500 7 LYS A 98 169.83 -49.99 REMARK 500 8 PRO A 10 -179.23 -69.72 REMARK 500 8 SER A 46 -30.73 -36.03 REMARK 500 8 VAL A 48 -29.74 -36.98 REMARK 500 8 ASP A 90 110.00 -35.35 REMARK 500 8 SER A 107 112.09 -34.62 REMARK 500 9 ALA A 20 116.46 -34.67 REMARK 500 9 PHE A 41 171.59 -52.34 REMARK 500 9 SER A 46 -32.51 -34.53 REMARK 500 9 VAL A 48 -35.28 -36.23 REMARK 500 9 ASP A 90 115.85 -34.66 REMARK 500 10 SER A 17 -178.76 -56.27 REMARK 500 10 ALA A 20 130.00 -39.82 REMARK 500 10 PHE A 41 171.22 -52.53 REMARK 500 10 SER A 80 102.90 -51.37 REMARK 500 10 ASP A 90 119.52 -37.06 REMARK 500 10 SER A 102 123.38 -174.35 REMARK 500 10 GLN A 103 151.24 -35.92 REMARK 500 10 PRO A 106 86.92 -69.79 REMARK 500 11 SER A 46 -25.66 -39.67 REMARK 500 11 VAL A 48 -33.49 -37.23 REMARK 500 11 ASP A 90 116.29 -38.11 REMARK 500 11 SER A 101 148.76 -35.77 REMARK 500 11 SER A 102 -61.98 -101.14 REMARK 500 12 GLU A 14 106.01 -45.13 REMARK 500 12 PHE A 41 178.89 -56.98 REMARK 500 12 SER A 46 -32.87 -34.33 REMARK 500 12 VAL A 48 -35.27 -36.21 REMARK 500 12 PHE A 69 123.64 -37.32 REMARK 500 12 ASP A 90 129.88 -36.56 REMARK 500 13 PRO A 10 -179.68 -69.77 REMARK 500 13 GLU A 14 112.88 -35.50 REMARK 500 13 GLU A 15 142.99 -36.18 REMARK 500 13 PRO A 16 -176.79 -69.72 REMARK 500 13 ALA A 20 140.69 -39.72 REMARK 500 13 PHE A 41 170.03 -55.47 REMARK 500 13 SER A 46 -34.65 -33.42 REMARK 500 13 SER A 68 169.59 -44.83 REMARK 500 13 PHE A 69 123.16 -39.14 REMARK 500 13 ASP A 90 122.38 -34.36 REMARK 500 14 GLU A 14 106.04 -53.49 REMARK 500 14 GLU A 22 49.60 35.35 REMARK 500 14 PRO A 31 0.00 -69.78 REMARK 500 14 SER A 46 -27.69 -37.84 REMARK 500 14 LEU A 50 -35.30 -39.55 REMARK 500 14 PRO A 70 -169.68 -69.83 REMARK 500 14 ASP A 90 109.43 -34.43 REMARK 500 14 LYS A 98 163.73 -46.43 REMARK 500 14 GLN A 100 42.05 -85.85 REMARK 500 15 GLU A 22 41.49 34.96 REMARK 500 15 PHE A 41 172.17 -52.51 REMARK 500 15 SER A 46 -33.64 -34.12 REMARK 500 15 VAL A 48 -34.07 -36.58 REMARK 500 15 PRO A 70 -168.06 -69.72 REMARK 500 15 ASP A 90 121.68 -38.88 REMARK 500 15 GLU A 99 35.95 33.77 REMARK 500 16 PRO A 13 -178.45 -69.67 REMARK 500 16 GLU A 22 34.35 38.56 REMARK 500 16 SER A 46 -36.16 -34.33 REMARK 500 16 VAL A 48 -36.20 -38.72 REMARK 500 16 PHE A 69 122.17 -37.76 REMARK 500 16 VAL A 76 99.62 -54.65 REMARK 500 16 SER A 81 -179.76 -62.63 REMARK 500 16 ASP A 90 94.84 -52.70 REMARK 500 17 ALA A 20 175.18 -46.98 REMARK 500 17 GLU A 22 51.65 34.38 REMARK 500 17 PHE A 41 176.30 -58.10 REMARK 500 17 SER A 46 -33.12 -34.26 REMARK 500 17 SER A 81 -179.10 -68.62 REMARK 500 17 ASP A 90 126.30 -34.80 REMARK 500 17 SER A 108 121.43 -170.14 REMARK 500 18 GLU A 8 31.99 37.90 REMARK 500 18 PRO A 10 -175.85 -69.76 REMARK 500 18 GLU A 14 132.10 -39.42 REMARK 500 18 SER A 46 -35.25 -34.54 REMARK 500 18 LYS A 98 144.95 -35.15 REMARK 500 18 SER A 107 150.43 -37.77 REMARK 500 19 SER A 17 -174.95 -69.41 REMARK 500 19 SER A 46 -34.27 -34.69 REMARK 500 19 PHE A 69 136.22 -171.26 REMARK 500 19 PRO A 70 -176.82 -69.73 REMARK 500 19 GLN A 100 118.93 -166.92 REMARK 500 20 GLU A 8 41.88 -86.45 REMARK 500 20 GLU A 14 116.46 -36.37 REMARK 500 20 ALA A 20 114.59 -37.16 REMARK 500 20 PRO A 31 2.82 -69.69 REMARK 500 20 PHE A 41 165.52 -49.70 REMARK 500 20 SER A 46 -36.13 -32.75 REMARK 500 20 VAL A 48 -37.15 -38.02 REMARK 500 20 PHE A 69 123.11 -35.31 REMARK 500 20 VAL A 76 105.42 -47.40 REMARK 500 20 ASP A 90 130.95 -34.59 REMARK 500 20 GLU A 97 153.87 -36.00 REMARK 500 20 PRO A 106 2.48 -69.67 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMI002020622.1 RELATED DB: TARGETDB
DBREF 2CR5 A 8 103 UNP Q9QZ49 UBXD6_MOUSE 182 277
SEQADV 2CR5 GLY A 1 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 SER A 2 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 SER A 3 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 GLY A 4 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 SER A 5 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 SER A 6 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 GLY A 7 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 SER A 104 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 GLY A 105 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 PRO A 106 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 SER A 107 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 SER A 108 UNP Q9QZ49 EXPRESSION TAG SEQADV 2CR5 GLY A 109 UNP Q9QZ49 EXPRESSION TAG
SEQRES 1 A 109 GLY SER SER GLY SER SER GLY GLU VAL PRO ASP LEU PRO SEQRES 2 A 109 GLU GLU PRO SER GLU THR ALA GLU GLU VAL VAL THR VAL SEQRES 3 A 109 ALA LEU ARG CYS PRO ASN GLY ARG VAL LEU ARG ARG ARG SEQRES 4 A 109 PHE PHE LYS SER TRP ASN SER GLN VAL LEU LEU ASP TRP SEQRES 5 A 109 MET MET LYS VAL GLY TYR HIS LYS SER LEU TYR ARG LEU SEQRES 6 A 109 SER THR SER PHE PRO ARG ARG ALA LEU GLU VAL GLU GLY SEQRES 7 A 109 GLY SER SER LEU GLU ASP ILE GLY ILE THR VAL ASP THR SEQRES 8 A 109 VAL LEU ASN VAL GLU GLU LYS GLU GLN SER SER GLN SER SEQRES 9 A 109 GLY PRO SER SER GLY
HELIX 1 1 SER A 46 VAL A 56 1 11 HELIX 2 2 LEU A 82 ILE A 85 1 4
SHEET 1 A 5 VAL A 35 PHE A 41 0 SHEET 2 A 5 VAL A 23 ARG A 29 -1 SHEET 3 A 5 THR A 91 GLU A 97 1 SHEET 4 A 5 TYR A 63 SER A 66 -1 SHEET 5 A 5 ARG A 72 ALA A 73 -1
CISPEP 1 PHE A 69 PRO A 70 1 -0.01 CISPEP 2 PHE A 69 PRO A 70 2 0.03 CISPEP 3 PHE A 69 PRO A 70 3 0.05 CISPEP 4 PHE A 69 PRO A 70 4 0.08 CISPEP 5 PHE A 69 PRO A 70 5 -0.03 CISPEP 6 PHE A 69 PRO A 70 6 -0.03 CISPEP 7 PHE A 69 PRO A 70 7 -0.06 CISPEP 8 PHE A 69 PRO A 70 8 -0.02 CISPEP 9 PHE A 69 PRO A 70 9 0.03 CISPEP 10 PHE A 69 PRO A 70 10 0.09 CISPEP 11 PHE A 69 PRO A 70 11 -0.01 CISPEP 12 PHE A 69 PRO A 70 12 0.04 CISPEP 13 PHE A 69 PRO A 70 13 -0.07 CISPEP 14 PHE A 69 PRO A 70 14 0.09 CISPEP 15 PHE A 69 PRO A 70 15 0.05 CISPEP 16 PHE A 69 PRO A 70 16 0.01 CISPEP 17 PHE A 69 PRO A 70 17 -0.01 CISPEP 18 PHE A 69 PRO A 70 18 -0.03 CISPEP 19 PHE A 69 PRO A 70 19 0.00 CISPEP 20 PHE A 69 PRO A 70 20 -0.01
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000