10 20 30 40 50 60 70 80 2CQ2 - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 19-MAY-05 2CQ2
TITLE SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN HYPOTHETICAL TITLE 2 PROTEIN LOC91801
COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN LOC91801; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 SYNONYM: HYPOTHETICAL PROTEIN BC015183; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LOC9180; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P041012-04; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS RRM DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT KEYWDS 2 ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA KEYWDS 4 BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 2CQ2 1 VERSN REVDAT 1 19-NOV-05 2CQ2 0
JRNL AUTH K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF RNA BINDING DOMAIN IN JRNL TITL 2 HYPOTHETICAL PROTEIN LOC91801 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CQ2 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024493.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.16MM 13C/15N-PROTEIN, 20MM REMARK 210 D-TRIS-HCL (PH 7.0), 100MM REMARK 210 NACL, 1MM D-DTT, 0.02% NAN3, REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801, NMRVIEW 5.0.4, REMARK 210 KUJIRA 0.9297, CYANA 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 RESTRAINTED MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 25 -175.97 -65.11 REMARK 500 1 LEU A 29 -34.72 -33.45 REMARK 500 1 HIS A 32 -70.79 -55.99 REMARK 500 1 GLU A 33 -38.39 -36.52 REMARK 500 1 TYR A 40 -178.18 -68.01 REMARK 500 1 GLN A 43 -36.84 -37.17 REMARK 500 1 ASN A 54 33.16 -88.95 REMARK 500 1 THR A 99 -62.83 -99.99 REMARK 500 1 GLN A 124 75.98 -66.49 REMARK 500 1 SER A 126 43.62 -93.12 REMARK 500 2 THR A 28 30.88 -84.52 REMARK 500 2 ASN A 54 34.28 -92.35 REMARK 500 2 THR A 99 -63.77 -96.48 REMARK 500 2 ASP A 107 -175.46 -65.36 REMARK 500 2 SER A 126 137.38 -175.02 REMARK 500 2 SER A 129 99.01 -37.89 REMARK 500 3 ASN A 54 33.65 -86.26 REMARK 500 3 THR A 99 -60.60 -91.86 REMARK 500 3 ASN A 101 107.57 -44.64 REMARK 500 3 GLN A 124 73.39 -69.63 REMARK 500 4 ALA A 25 -175.09 -53.00 REMARK 500 4 LEU A 29 -37.53 -35.39 REMARK 500 4 GLN A 43 -32.59 -39.80 REMARK 500 4 ASN A 54 32.01 -91.71 REMARK 500 4 THR A 99 -63.72 -92.15 REMARK 500 4 GLN A 124 70.98 -69.09 REMARK 500 5 THR A 28 31.25 -98.40 REMARK 500 5 ASN A 54 34.98 -90.70 REMARK 500 5 THR A 99 -64.03 -99.11 REMARK 500 5 GLN A 124 77.63 -63.08 REMARK 500 6 SER A 20 -45.84 -130.31 REMARK 500 6 LEU A 29 -38.59 -33.92 REMARK 500 6 HIS A 32 -74.72 -46.17 REMARK 500 6 THR A 99 -62.07 -93.75 REMARK 500 6 GLN A 124 72.79 -66.22 REMARK 500 6 PRO A 128 93.17 -69.77 REMARK 500 7 SER A 22 42.71 34.61 REMARK 500 7 SER A 23 41.79 -99.33 REMARK 500 7 ALA A 25 138.29 -36.20 REMARK 500 7 ASN A 49 26.61 48.25 REMARK 500 7 ASN A 54 32.28 -88.42 REMARK 500 7 THR A 99 -62.90 -98.60 REMARK 500 7 ASP A 107 -176.46 -67.42 REMARK 500 7 GLN A 124 77.79 -60.65 REMARK 500 7 SER A 129 153.75 -46.61 REMARK 500 8 SER A 19 131.96 -35.24 REMARK 500 8 SER A 20 144.12 -171.79 REMARK 500 8 SER A 22 51.94 37.49 REMARK 500 8 ALA A 25 -73.21 -71.53 REMARK 500 8 LYS A 26 52.52 36.17 REMARK 500 8 ASN A 49 25.01 49.82 REMARK 500 8 THR A 99 -63.35 -97.25 REMARK 500 8 SER A 130 -60.99 -133.58 REMARK 500 9 LEU A 29 -33.17 -34.53 REMARK 500 9 ASN A 54 34.13 -88.08 REMARK 500 9 THR A 99 -60.36 -97.18 REMARK 500 9 ASP A 107 -178.87 -64.84 REMARK 500 9 GLN A 124 76.72 -65.63 REMARK 500 10 ASN A 54 34.41 -91.65 REMARK 500 10 PRO A 81 0.42 -69.89 REMARK 500 10 THR A 99 -63.69 -97.63 REMARK 500 10 ASP A 107 -178.33 -66.34 REMARK 500 10 SER A 129 117.87 -174.48 REMARK 500 11 ALA A 25 -179.97 -64.24 REMARK 500 11 LEU A 29 -38.25 -38.88 REMARK 500 11 GLU A 33 -37.86 -36.46 REMARK 500 11 ASN A 49 27.56 47.74 REMARK 500 11 ASN A 54 36.54 -91.66 REMARK 500 11 PRO A 81 0.73 -69.83 REMARK 500 11 THR A 99 -62.81 -100.85 REMARK 500 11 ASN A 101 109.30 -54.25 REMARK 500 11 GLN A 124 76.16 -66.01 REMARK 500 12 SER A 20 120.94 -36.19 REMARK 500 12 ALA A 25 -175.20 -57.34 REMARK 500 12 GLN A 43 -31.80 -38.15 REMARK 500 12 ASN A 54 32.35 -87.54 REMARK 500 12 THR A 99 -63.75 -98.62 REMARK 500 13 SER A 23 52.07 -95.73 REMARK 500 13 ARG A 31 -70.44 -76.77 REMARK 500 13 ASN A 54 33.01 -89.72 REMARK 500 13 THR A 99 -63.15 -96.58 REMARK 500 13 SER A 126 111.32 -173.36 REMARK 500 13 SER A 129 36.95 72.39 REMARK 500 14 SER A 20 -44.15 -133.53 REMARK 500 14 LYS A 26 31.23 35.41 REMARK 500 14 THR A 28 24.97 49.16 REMARK 500 14 ASN A 54 32.90 -89.34 REMARK 500 14 THR A 99 -63.98 -95.33 REMARK 500 14 GLN A 124 73.41 -66.88 REMARK 500 14 SER A 126 112.00 -174.67 REMARK 500 15 SER A 20 108.14 -46.71 REMARK 500 15 ASN A 49 26.42 46.71 REMARK 500 15 ASN A 54 35.99 -90.94 REMARK 500 15 THR A 99 -63.91 -92.96 REMARK 500 15 GLN A 124 79.20 -63.26 REMARK 500 15 SER A 130 85.00 -67.76 REMARK 500 16 SER A 23 143.17 -171.10 REMARK 500 16 THR A 28 31.60 -94.14 REMARK 500 16 ASN A 49 25.47 47.80 REMARK 500 16 PRO A 81 1.45 -69.73 REMARK 500 16 THR A 99 -64.10 -95.24 REMARK 500 16 GLN A 124 45.04 -79.51 REMARK 500 16 TRP A 125 141.32 -38.95 REMARK 500 17 ALA A 25 177.87 -59.41 REMARK 500 17 ASN A 54 34.84 -89.90 REMARK 500 17 THR A 99 -63.34 -95.35 REMARK 500 17 GLN A 124 77.74 -59.81 REMARK 500 18 SER A 22 -61.18 -121.95 REMARK 500 18 THR A 28 32.62 -85.91 REMARK 500 18 HIS A 32 -29.36 -36.71 REMARK 500 18 ASN A 54 32.12 -88.45 REMARK 500 18 THR A 99 -63.37 -97.03 REMARK 500 18 ASN A 101 93.16 -42.21 REMARK 500 18 SER A 130 106.85 -162.16 REMARK 500 19 ASN A 54 33.74 -86.41 REMARK 500 19 THR A 99 -64.01 -90.18 REMARK 500 19 GLN A 124 76.89 -60.19 REMARK 500 20 ALA A 25 178.15 -53.01 REMARK 500 20 THR A 28 39.75 -81.37 REMARK 500 20 ASN A 54 35.16 -89.58 REMARK 500 20 ASN A 101 93.19 -37.70 REMARK 500 20 GLN A 124 75.87 -67.15 REMARK 500 REMARK 500 REMARK: NULL
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSI002010820.1 RELATED DB: TARGETDB
DBREF 2CQ2 A 25 125 UNP Q8N989 Q8N989_HUMAN 25 125
SEQADV 2CQ2 GLY A 18 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 19 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 20 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 GLY A 21 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 22 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 23 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 GLY A 24 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 126 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 GLY A 127 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 PRO A 128 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 129 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 SER A 130 UNP Q8N989 CLONING ARTIFACT SEQADV 2CQ2 GLY A 131 UNP Q8N989 CLONING ARTIFACT
SEQRES 1 A 114 GLY SER SER GLY SER SER GLY ALA LYS HIS THR LEU LEU SEQRES 2 A 114 ARG HIS GLU GLY ILE GLU THR VAL SER TYR ALA THR GLN SEQRES 3 A 114 SER LEU VAL VAL ALA ASN GLY GLY LEU GLY ASN GLY VAL SEQRES 4 A 114 SER ARG ASN GLN LEU LEU PRO VAL LEU GLU LYS CYS GLY SEQRES 5 A 114 LEU VAL ASP ALA LEU LEU MET PRO PRO ASN LYS PRO TYR SEQRES 6 A 114 SER PHE ALA ARG TYR ARG THR THR GLU GLU SER LYS ARG SEQRES 7 A 114 ALA TYR VAL THR LEU ASN GLY LYS GLU VAL VAL ASP ASP SEQRES 8 A 114 LEU GLY GLN LYS ILE THR LEU TYR LEU ASN PHE VAL GLU SEQRES 9 A 114 LYS VAL GLN TRP SER GLY PRO SER SER GLY
HELIX 1 1 THR A 28 GLY A 34 1 7 HELIX 2 2 GLY A 51 GLY A 55 5 5 HELIX 3 3 SER A 57 GLY A 69 1 13 HELIX 4 4 THR A 89 LEU A 100 1 12
SHEET 1 A 4 VAL A 71 LEU A 75 0 SHEET 2 A 4 SER A 83 TYR A 87 -1 O PHE A 84 N LEU A 75 SHEET 3 A 4 SER A 44 ALA A 48 -1 N LEU A 45 O ALA A 85 SHEET 4 A 4 TYR A 116 VAL A 120 -1 O TYR A 116 N ALA A 48 SHEET 1 B 2 GLU A 104 VAL A 106 0 SHEET 2 B 2 LYS A 112 THR A 114 -1 O ILE A 113 N VAL A 105
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000