10 20 30 40 50 60 70 80 2CPQ - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER RNA BINDING PROTEIN 19-MAY-05 2CPQ
TITLE SOLUTION STRUCTURE OF THE N-TERMINAL KH DOMAIN OF HUMAN FXR1
COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRAGILE X MENTAL RETARDATION SYNDROME RELATED COMPND 3 PROTEIN 1, ISOFORM B'; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: KH DOMAIN; COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FXR1; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040621-02; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS KH DOMAIN, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON KEYWDS 2 PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN KEYWDS 3 STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, RNA KEYWDS 4 BINDING PROTEIN
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 2CPQ 1 VERSN REVDAT 1 19-NOV-05 2CPQ 0
JRNL AUTH T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE N-TERMINAL KH DOMAIN OF JRNL TITL 2 HUMAN FXR1 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CPQ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024484.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.20MM 13C/15N-PROTEIN; 20MM REMARK 210 D-TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE REMARK 210 20030801/20031121, NMRVIEW REMARK 210 5.0.4, KUJIRA 0.925, CYANA REMARK 210 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION, STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 206 153.12 -45.09 REMARK 500 1 HIS A 237 48.28 35.20 REMARK 500 1 PRO A 292 97.77 -69.77 REMARK 500 2 ALA A 216 144.38 -34.81 REMARK 500 2 PRO A 289 87.14 -69.79 REMARK 500 3 SER A 239 -69.30 -91.58 REMARK 500 3 ASP A 284 97.42 -36.15 REMARK 500 3 PRO A 292 94.51 -69.78 REMARK 500 3 SER A 293 37.53 37.26 REMARK 500 4 HIS A 237 41.50 34.77 REMARK 500 4 PRO A 289 2.83 -69.78 REMARK 500 4 SER A 294 102.27 -58.29 REMARK 500 5 LEU A 215 58.05 -97.71 REMARK 500 5 ASP A 284 107.11 -38.74 REMARK 500 5 SER A 293 150.01 -38.50 REMARK 500 6 HIS A 237 45.37 34.85 REMARK 500 6 SER A 294 111.45 -169.22 REMARK 500 7 ALA A 216 133.53 -171.47 REMARK 500 7 SER A 239 -61.51 -92.80 REMARK 500 7 ASP A 284 134.84 -35.63 REMARK 500 7 SER A 290 170.42 -48.98 REMARK 500 8 GLU A 227 -28.21 -38.15 REMARK 500 8 HIS A 237 35.03 73.73 REMARK 500 8 GLU A 280 153.10 -47.92 REMARK 500 9 SER A 209 145.52 -36.86 REMARK 500 9 GLN A 214 46.71 -94.12 REMARK 500 9 ALA A 269 -33.61 -38.50 REMARK 500 9 ASP A 284 112.25 -34.93 REMARK 500 9 PRO A 289 93.07 -69.78 REMARK 500 10 LEU A 215 82.81 -66.11 REMARK 500 10 HIS A 237 33.22 35.37 REMARK 500 10 SER A 293 43.68 37.31 REMARK 500 10 SER A 294 -53.30 -131.56 REMARK 500 11 SER A 206 150.09 -39.51 REMARK 500 11 HIS A 237 30.64 72.93 REMARK 500 12 LEU A 215 45.44 -84.90 REMARK 500 12 HIS A 237 31.34 74.40 REMARK 500 13 ALA A 216 145.62 -38.72 REMARK 500 13 HIS A 237 48.80 35.91 REMARK 500 13 ASP A 284 113.27 -35.56 REMARK 500 13 SER A 294 161.55 -40.51 REMARK 500 14 SER A 207 100.03 -49.73 REMARK 500 14 HIS A 237 49.56 34.63 REMARK 500 14 SER A 239 -61.24 -93.74 REMARK 500 14 ALA A 269 -34.11 -36.80 REMARK 500 15 SER A 210 82.25 -63.44 REMARK 500 15 ALA A 216 -178.90 -69.94 REMARK 500 15 ARG A 226 172.67 -53.90 REMARK 500 15 PRO A 289 92.83 -69.77 REMARK 500 16 GLN A 214 96.60 -64.39 REMARK 500 16 ALA A 216 161.12 -48.06 REMARK 500 16 ARG A 226 173.00 -53.52 REMARK 500 16 HIS A 237 51.15 35.20 REMARK 500 16 SER A 239 -68.95 -92.06 REMARK 500 16 ASP A 270 -30.20 -36.51 REMARK 500 17 SER A 206 111.61 -164.20 REMARK 500 17 ALA A 233 -36.85 -37.62 REMARK 500 17 SER A 239 -65.65 -92.68 REMARK 500 17 PRO A 292 86.68 -69.80 REMARK 500 18 HIS A 237 42.59 36.76 REMARK 500 18 GLU A 280 155.31 -47.07 REMARK 500 18 ASP A 284 103.98 -40.60 REMARK 500 18 SER A 294 -62.82 -108.72 REMARK 500 20 LEU A 215 116.93 -168.36 REMARK 500 20 ALA A 216 160.49 -45.25 REMARK 500 20 HIS A 237 54.46 37.07 REMARK 500 20 ASP A 284 138.02 -39.66 REMARK 500 20 SER A 294 -32.98 -38.50 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSS001001578 RELATED DB: TARGETDB
DBREF 2CPQ A 212 289 UNP P51114 FXR1_HUMAN 212 289
SEQADV 2CPQ GLY A 205 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ SER A 206 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ SER A 207 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ GLY A 208 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ SER A 209 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ SER A 210 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ GLY A 211 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ SER A 290 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ GLY A 291 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ PRO A 292 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ SER A 293 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ SER A 294 UNP P51114 CLONING ARTIFACT SEQADV 2CPQ GLY A 295 UNP P51114 CLONING ARTIFACT
SEQRES 1 A 91 GLY SER SER GLY SER SER GLY THR LYS GLN LEU ALA ALA SEQRES 2 A 91 ALA PHE HIS GLU GLU PHE VAL VAL ARG GLU ASP LEU MET SEQRES 3 A 91 GLY LEU ALA ILE GLY THR HIS GLY SER ASN ILE GLN GLN SEQRES 4 A 91 ALA ARG LYS VAL PRO GLY VAL THR ALA ILE GLU LEU ASP SEQRES 5 A 91 GLU ASP THR GLY THR PHE ARG ILE TYR GLY GLU SER ALA SEQRES 6 A 91 ASP ALA VAL LYS LYS ALA ARG GLY PHE LEU GLU PHE VAL SEQRES 7 A 91 GLU ASP PHE ILE GLN VAL PRO SER GLY PRO SER SER GLY
HELIX 1 1 LEU A 229 ILE A 234 1 6 HELIX 2 2 SER A 239 ARG A 245 1 7 HELIX 3 3 ALA A 269 ARG A 276 1 8
SHEET 1 A 3 PHE A 219 VAL A 224 0 SHEET 2 A 3 THR A 261 GLY A 266 -1 O ILE A 264 N GLU A 221 SHEET 3 A 3 VAL A 250 ASP A 256 -1 N GLU A 254 O ARG A 263
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000