10 20 30 40 50 60 70 80 2CPH - Header ----|----|----|----|----|----|----|----|----|----|----|----|----|----|----|----| Asymmetric UnitHEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 19-MAY-05 2CPH
TITLE SOLUTION STRUCTURE OF THE C-TERMINAL RNA RECOGNITION MOTIF TITLE 2 OF HYPOTHETICAL RNA-BINDING PROTEIN RBM19
COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA BINDING MOTIF PROTEIN 19; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RNA RECOGNITION MOTIF; COMPND 5 ENGINEERED: YES
SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: RBM19; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P040705-04; SOURCE 8 OTHER_DETAILS: CELL-FREE PROTEIN SYNTHESIS
KEYWDS RNA RECOGNITION MOTIF, RRM, RNP, STRUCTURAL GENOMICS, KEYWDS 2 NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND KEYWDS 3 FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 4 INITIATIVE, RSGI, UNKNOWN FUNCTION
EXPDTA SOLUTION NMR
NUMMDL 20
AUTHOR T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA,M.SHIROUZU, AUTHOR 2 S.YOKOYAMA,RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE AUTHOR 3 (RSGI)
REVDAT 2 24-FEB-09 2CPH 1 VERSN REVDAT 1 19-NOV-05 2CPH 0
JRNL AUTH T.NAGATA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, JRNL AUTH 2 M.SHIROUZU,S.YOKOYAMA JRNL TITL SOLUTION STRUCTURE OF THE C-TERMINAL RNA JRNL TITL 2 RECOGNITION MOTIF OF HYPOTHETICAL RNA-BINDING JRNL TITL 3 PROTEIN RBM19 JRNL REF TO BE PUBLISHED JRNL REFN
REMARK 1
REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE.
REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, P. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4 REMARK 4 2CPH COMPLIES WITH FORMAT V. 3.15, 01-DEC-08
REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB024479.
REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.20MM 13C/15N-PROTEIN; 20MM REMARK 210 D-TRIS-HCL(PH7.0); 100MM NACL; REMARK 210 1MM D-DTT; 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY, 3D_ REMARK 210 13C-SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE : REMARK 210 20030801/20031121, NMRVIEW REMARK 210 5.0.4, KUJIRA 0.925, CYANA REMARK 210 2.0.17 REMARK 210 METHOD USED : TORSION ANGLE DYANAMICS, REMARK 210 SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY, REMARK 210 STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL
REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS.
REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLN A 454 178.69 -49.30 REMARK 500 1 LEU A 481 -38.49 -37.78 REMARK 500 1 THR A 498 95.08 -39.81 REMARK 500 1 ALA A 502 -74.97 -95.03 REMARK 500 1 ARG A 504 -178.66 -64.79 REMARK 500 1 SER A 527 106.88 -166.20 REMARK 500 1 SER A 548 -64.66 -101.41 REMARK 500 1 PRO A 550 -177.20 -69.81 REMARK 500 2 GLN A 454 140.27 -173.28 REMARK 500 2 ARG A 479 -70.41 -48.82 REMARK 500 2 THR A 490 136.57 -174.86 REMARK 500 2 MET A 497 -61.59 -103.69 REMARK 500 2 SER A 548 168.97 -44.38 REMARK 500 3 SER A 452 91.87 -50.61 REMARK 500 3 GLN A 454 150.87 -42.49 REMARK 500 3 LYS A 457 121.05 -34.82 REMARK 500 3 THR A 484 -36.25 -39.71 REMARK 500 3 THR A 490 140.67 -174.51 REMARK 500 3 ALA A 502 -55.45 -121.00 REMARK 500 3 LYS A 519 -70.34 -40.20 REMARK 500 3 SER A 527 109.83 -173.84 REMARK 500 4 PRO A 470 -166.09 -69.78 REMARK 500 4 THR A 498 74.94 -64.72 REMARK 500 4 CYS A 525 -32.52 -35.99 REMARK 500 4 SER A 527 109.40 -170.19 REMARK 500 4 ASP A 541 78.00 -106.18 REMARK 500 5 THR A 490 131.14 -173.03 REMARK 500 5 THR A 498 62.07 -112.27 REMARK 500 5 CYS A 525 -39.66 -38.23 REMARK 500 5 SER A 527 105.91 -170.83 REMARK 500 6 SER A 451 47.74 -83.61 REMARK 500 6 THR A 460 82.84 -67.74 REMARK 500 6 ALA A 473 124.07 -39.13 REMARK 500 6 THR A 498 40.94 34.41 REMARK 500 6 THR A 500 108.32 -45.88 REMARK 500 6 SER A 527 116.50 -167.68 REMARK 500 6 ALA A 540 154.21 -39.93 REMARK 500 7 SER A 448 114.51 -173.64 REMARK 500 7 SER A 483 -35.67 -37.25 REMARK 500 7 THR A 490 148.83 -174.00 REMARK 500 7 THR A 500 102.90 -54.60 REMARK 500 7 HIS A 503 170.84 -54.84 REMARK 500 7 VAL A 546 39.81 35.83 REMARK 500 7 SER A 548 -44.69 -132.05 REMARK 500 7 SER A 551 -61.43 -97.87 REMARK 500 8 SER A 451 -52.45 -127.69 REMARK 500 8 ASN A 468 32.36 70.39 REMARK 500 8 SER A 483 -34.10 -38.51 REMARK 500 8 THR A 498 94.79 -41.14 REMARK 500 8 SER A 527 105.91 -160.72 REMARK 500 8 TYR A 531 28.14 46.11 REMARK 500 8 PRO A 550 1.15 -69.74 REMARK 500 9 SER A 451 39.02 -83.40 REMARK 500 9 SER A 452 51.60 37.78 REMARK 500 9 LYS A 496 106.06 -49.66 REMARK 500 9 THR A 498 163.09 -49.45 REMARK 500 9 ALA A 502 -74.82 -88.42 REMARK 500 9 SER A 527 105.96 -173.62 REMARK 500 9 ALA A 540 145.09 -35.34 REMARK 500 10 LYS A 458 -59.52 -129.97 REMARK 500 10 ASN A 468 43.00 71.31 REMARK 500 10 ALA A 473 107.47 -50.19 REMARK 500 10 GLN A 515 -70.87 -35.91 REMARK 500 10 SER A 527 108.25 -174.27 REMARK 500 10 ALA A 540 158.29 -43.20 REMARK 500 10 GLN A 547 116.06 -163.69 REMARK 500 11 THR A 484 -26.94 -39.18 REMARK 500 11 THR A 490 136.22 -172.41 REMARK 500 11 THR A 498 40.14 29.17 REMARK 500 11 ALA A 502 44.25 -106.31 REMARK 500 11 VAL A 546 43.07 35.39 REMARK 500 11 SER A 551 43.77 38.47 REMARK 500 12 PRO A 456 92.23 -69.75 REMARK 500 12 GLN A 459 73.65 -104.24 REMARK 500 12 ARG A 479 -71.03 -42.47 REMARK 500 12 SER A 483 -31.91 -36.48 REMARK 500 12 THR A 490 131.10 -173.87 REMARK 500 12 ALA A 520 -70.69 -54.79 REMARK 500 12 SER A 527 114.85 -169.83 REMARK 500 13 LYS A 458 36.95 -97.38 REMARK 500 13 THR A 484 -34.28 -38.03 REMARK 500 13 THR A 490 132.74 -173.78 REMARK 500 13 MET A 497 -50.50 -124.04 REMARK 500 13 THR A 498 173.96 -50.32 REMARK 500 13 ALA A 502 -64.64 -122.70 REMARK 500 13 SER A 527 109.22 -170.48 REMARK 500 14 GLN A 454 157.87 -44.28 REMARK 500 14 THR A 490 133.65 -172.88 REMARK 500 14 SER A 527 108.93 -171.60 REMARK 500 15 LYS A 457 125.39 -34.40 REMARK 500 15 SER A 483 -39.80 -37.24 REMARK 500 15 THR A 490 147.20 -174.03 REMARK 500 15 SER A 527 105.36 -170.84 REMARK 500 16 SER A 451 127.83 -172.01 REMARK 500 16 PRO A 456 2.48 -69.75 REMARK 500 16 LYS A 457 118.75 -34.34 REMARK 500 16 GLN A 459 86.71 -51.12 REMARK 500 16 THR A 490 149.87 -172.98 REMARK 500 16 THR A 498 45.90 36.14 REMARK 500 16 THR A 500 40.21 -81.75 REMARK 500 16 LYS A 519 -71.28 -48.32 REMARK 500 16 SER A 527 105.46 -174.50 REMARK 500 16 SER A 548 47.10 36.34 REMARK 500 17 PRO A 456 2.09 -69.77 REMARK 500 17 LYS A 458 41.55 33.26 REMARK 500 17 SER A 527 106.33 -166.72 REMARK 500 17 PRO A 550 -171.66 -69.76 REMARK 500 17 SER A 552 119.56 -160.79 REMARK 500 18 LYS A 458 -71.99 -34.45 REMARK 500 18 HIS A 526 -70.09 -41.49 REMARK 500 19 SER A 452 117.21 -173.55 REMARK 500 19 GLN A 454 71.08 -118.73 REMARK 500 19 THR A 460 51.76 34.54 REMARK 500 19 THR A 461 168.76 -44.85 REMARK 500 19 THR A 490 138.89 -174.13 REMARK 500 19 HIS A 503 101.12 -56.56 REMARK 500 19 SER A 527 106.12 -163.92 REMARK 500 19 ASP A 541 79.15 -108.66 REMARK 500 20 PRO A 456 2.54 -69.74 REMARK 500 20 THR A 500 41.47 37.91 REMARK 500 20 SER A 527 106.31 -172.46 REMARK 500 20 THR A 545 156.83 -44.77 REMARK 500 REMARK 500 REMARK: NULL
REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED
REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MMT007011210.11 RELATED DB: TARGETDB
DBREF 2CPH A 454 547 UNP Q8R3C6 RBM19_MOUSE 816 909
SEQADV 2CPH GLY A 447 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH SER A 448 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH SER A 449 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH GLY A 450 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH SER A 451 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH SER A 452 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH GLY A 453 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH SER A 548 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH GLY A 549 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH PRO A 550 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH SER A 551 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH SER A 552 UNP Q8R3C6 CLONING ARTIFACT SEQADV 2CPH GLY A 553 UNP Q8R3C6 CLONING ARTIFACT
SEQRES 1 A 107 GLY SER SER GLY SER SER GLY GLN VAL PRO LYS LYS GLN SEQRES 2 A 107 THR THR SER LYS ILE LEU VAL ARG ASN ILE PRO PHE GLN SEQRES 3 A 107 ALA ASN GLN ARG GLU ILE ARG GLU LEU PHE SER THR PHE SEQRES 4 A 107 GLY GLU LEU LYS THR VAL ARG LEU PRO LYS LYS MET THR SEQRES 5 A 107 GLY THR GLY ALA HIS ARG GLY PHE GLY PHE VAL ASP PHE SEQRES 6 A 107 ILE THR LYS GLN ASP ALA LYS LYS ALA PHE ASN ALA LEU SEQRES 7 A 107 CYS HIS SER THR HIS LEU TYR GLY ARG ARG LEU VAL LEU SEQRES 8 A 107 GLU TRP ALA ASP SER GLU VAL THR VAL GLN SER GLY PRO SEQRES 9 A 107 SER SER GLY
HELIX 1 1 GLN A 475 PHE A 482 1 8 HELIX 2 2 LYS A 514 LEU A 524 1 11
SHEET 1 A 4 LEU A 488 ARG A 492 0 SHEET 2 A 4 PHE A 506 PHE A 511 -1 O PHE A 508 N ARG A 492 SHEET 3 A 4 ILE A 464 ARG A 467 -1 N ILE A 464 O VAL A 509 SHEET 4 A 4 VAL A 536 TRP A 539 -1 O VAL A 536 N ARG A 467
CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 1.000000 0.000000 0.000000 0.00000
SCALE2 0.000000 1.000000 0.000000 0.00000
SCALE3 0.000000 0.000000 1.000000 0.00000